BLASTX nr result

ID: Coptis21_contig00009042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009042
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20004.3| unnamed protein product [Vitis vinifera]              362   8e-98
ref|XP_002266384.1| PREDICTED: protein FAM135B-like [Vitis vinif...   357   3e-96
ref|XP_004146761.1| PREDICTED: protein FAM135B-like [Cucumis sat...   345   7e-93
ref|XP_002325960.1| predicted protein [Populus trichocarpa] gi|2...   345   7e-93
ref|XP_002528165.1| conserved hypothetical protein [Ricinus comm...   343   3e-92

>emb|CBI20004.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  362 bits (929), Expect = 8e-98
 Identities = 188/316 (59%), Positives = 229/316 (72%)
 Frame = +3

Query: 30  NVKPQRVAPDMLETVQEIAIYIHRFHNLDLFQQGWYRIKITMRWEDSNYTSPGTPARVVQ 209
           N KP +  P MLETVQEIAIYIHRFHNLDLFQQGWY+IKITMRWED  +  PGTPARVVQ
Sbjct: 24  NAKP-KPPPAMLETVQEIAIYIHRFHNLDLFQQGWYQIKITMRWEDEEFELPGTPARVVQ 82

Query: 210 YEAPDLDSDNIYGLWRIDDIDNSFCTQPFRIKYARQDVLLSVMVSFNVSLGNYEGPSTSA 389
           YEAP+L  ++ YG+WRIDD DNSF TQPFRI+YARQDVLLS+M+SFN+SL  YEG STSA
Sbjct: 83  YEAPELGPEDAYGVWRIDDTDNSFSTQPFRIRYARQDVLLSLMISFNLSLRKYEGLSTSA 142

Query: 390 VILKFELMYTPVLETGSDLQGSADVISAAVHEFRIPPKALLGLHSYCPVHFDTFHSVLVD 569
           +ILKFELMY P+LE GS+LQ S D   A+VHEFRIPPKALLGLHSYCPVHFD+FH+VLVD
Sbjct: 143 IILKFELMYAPMLENGSELQASLDACPASVHEFRIPPKALLGLHSYCPVHFDSFHAVLVD 202

Query: 570 LSVHIILLKAGTYSGSGTTEDYELFSRNDKLSGEGIYVHPKSIAFMKAMLTARDILVDEL 749
           +S+HI LL+AG ++ S     +          G G     K +   KA+  ARD L++EL
Sbjct: 203 ISIHITLLRAGIHAPSSKVPRF----------GMGHVADLKQV--FKALFAARDRLLEEL 250

Query: 750 HKISKAIGRAIDLTDIASSVGDNKLIGSITKGDLDTVNAEVSEFRIRARQVTSEPQNGFQ 929
            K+SK I + IDLTD  S + D KLI +  + D+ T +A+ S       QV+ EPQ+G +
Sbjct: 251 QKLSKEINQTIDLTDFISKLNDTKLIHTSLQADVVTTDAQPS------GQVSGEPQSGLE 304

Query: 930 ISNGSLDFESDGMLQS 977
            +NG ++  SD  L S
Sbjct: 305 KANGIVELRSDRPLNS 320


>ref|XP_002266384.1| PREDICTED: protein FAM135B-like [Vitis vinifera]
          Length = 789

 Score =  357 bits (915), Expect = 3e-96
 Identities = 189/323 (58%), Positives = 230/323 (71%), Gaps = 7/323 (2%)
 Frame = +3

Query: 30  NVKPQRVAPDMLETVQEIAIYIHRFHNLDLFQQGWYRIKITMRWEDSNYTSPGTPARVVQ 209
           N KP +  P MLETVQEIAIYIHRFHNLDLFQQGWY+IKITMRWED  +  PGTPARVVQ
Sbjct: 24  NAKP-KPPPAMLETVQEIAIYIHRFHNLDLFQQGWYQIKITMRWEDEEFELPGTPARVVQ 82

Query: 210 YEAPDLDSDNIYGLWRIDDIDNSFCTQPFRIKYARQDVLLSVMVSFNVSLGNYEGPSTSA 389
           YEAP+L  ++ YG+WRIDD DNSF TQPFRI+YARQDVLLS+M+SFN+SL  YEG STSA
Sbjct: 83  YEAPELGPEDAYGVWRIDDTDNSFSTQPFRIRYARQDVLLSLMISFNLSLRKYEGLSTSA 142

Query: 390 VILKFELMYTPVLETGSDLQGSADVISAAVHEFRIPPKALLGLHSYCPVHFDTFHSVLVD 569
           +ILKFELMY P+LE G  L  S D   A+VHEFRIPPKALLGLHSYCPVHFD+FH+VLVD
Sbjct: 143 IILKFELMYAPMLENG--LVASLDACPASVHEFRIPPKALLGLHSYCPVHFDSFHAVLVD 200

Query: 570 LSVHIILLKAGTYSGSG-------TTEDYELFSRNDKLSGEGIYVHPKSIAFMKAMLTAR 728
           +S+HI LL+AG ++ S          ED    + N  + G G     K +   KA+  AR
Sbjct: 201 ISIHITLLRAGIHAPSSKVPSNFHAVEDVAGENLNGSIQGMGHVADLKQV--FKALFAAR 258

Query: 729 DILVDELHKISKAIGRAIDLTDIASSVGDNKLIGSITKGDLDTVNAEVSEFRIRARQVTS 908
           D L++EL K+SK I + IDLTD  S + D KLI +  + D+ T +A+ S       QV+ 
Sbjct: 259 DRLLEELQKLSKEINQTIDLTDFISKLNDTKLIHTSLQADVVTTDAQPS------GQVSG 312

Query: 909 EPQNGFQISNGSLDFESDGMLQS 977
           EPQ+G + +NG ++  SD  L S
Sbjct: 313 EPQSGLEKANGIVELRSDRPLNS 335


>ref|XP_004146761.1| PREDICTED: protein FAM135B-like [Cucumis sativus]
          Length = 799

 Score =  345 bits (886), Expect = 7e-93
 Identities = 178/301 (59%), Positives = 216/301 (71%), Gaps = 3/301 (0%)
 Frame = +3

Query: 60  MLETVQEIAIYIHRFHNLDLFQQGWYRIKITMRWEDSNYTSPGTPARVVQYEAPDLDSDN 239
           ML+TVQEIAIYIHRFHNLDLFQQGWY+IK+TMRWEDS YTS GTPARVVQYEAPDL S N
Sbjct: 36  MLDTVQEIAIYIHRFHNLDLFQQGWYQIKLTMRWEDSEYTSVGTPARVVQYEAPDLGSGN 95

Query: 240 IYGLWRIDDIDNSFCTQPFRIKYARQDVLLSVMVSFNVSLGNYEGPSTSAVILKFELMYT 419
            YG+W+IDD DNSF TQPF+IKYARQD+LLS+M+SFN  L  YE PSTSAVILKFELMY 
Sbjct: 96  SYGVWKIDDTDNSFSTQPFKIKYARQDILLSIMISFNFPLVKYEAPSTSAVILKFELMYA 155

Query: 420 PVLETGSDLQGSADVISAAVHEFRIPPKALLGLHSYCPVHFDTFHSVLVDLSVHIILLKA 599
           P+LE G +LQ S D   AAVHEFRIP KALLGLHSYCPVHFD FH+VLVD+S+HI LL++
Sbjct: 156 PILEAGPELQASLDASPAAVHEFRIPSKALLGLHSYCPVHFDAFHAVLVDVSIHICLLRS 215

Query: 600 GTYSGSGTTEDYE--LFSRN-DKLSGEGIYVHPKSIAFMKAMLTARDILVDELHKISKAI 770
            T  G  ++E ++  L +R+ D  +  G     K +  +KA+LTARDIL++E   +SKAI
Sbjct: 216 YT-PGKKSSEPHKENLAARHFDPQTQVGASRDEKDVTLIKALLTARDILLEEFQNLSKAI 274

Query: 771 GRAIDLTDIASSVGDNKLIGSITKGDLDTVNAEVSEFRIRARQVTSEPQNGFQISNGSLD 950
            + +D TD  S++ D K +  +     D V  E +            PQN  + +NG   
Sbjct: 275 DQTVDFTDFISAMDDTKYVDVLIPSKRDNVKGEAAG--------QGNPQNSLKRTNGGDQ 326

Query: 951 F 953
           F
Sbjct: 327 F 327


>ref|XP_002325960.1| predicted protein [Populus trichocarpa] gi|222862835|gb|EEF00342.1|
           predicted protein [Populus trichocarpa]
          Length = 778

 Score =  345 bits (886), Expect = 7e-93
 Identities = 181/315 (57%), Positives = 221/315 (70%), Gaps = 12/315 (3%)
 Frame = +3

Query: 60  MLETVQEIAIYIHRFHNLDLFQQGWYRIKITMRWEDSNYTSPGTPARVVQYEAPDLDSDN 239
           M ETVQEIA+YIHRFHNLDLFQQGWY++KI+MRWEDS YTS  TPARVVQYEAPDL  +N
Sbjct: 3   MFETVQEIAVYIHRFHNLDLFQQGWYQMKISMRWEDSEYTSLATPARVVQYEAPDLGGEN 62

Query: 240 IYGLWRIDDIDNSFCTQPFRIKYARQDVLLSVMVSFNVSLGNYEGPSTSAVILKFELMYT 419
           IYG+WRIDD DNSF TQPFRIKYARQD+ LS+M+SF + LG  EGPSTSAVILKFELM  
Sbjct: 63  IYGIWRIDDTDNSFLTQPFRIKYARQDIRLSIMISFTLPLGENEGPSTSAVILKFELMQA 122

Query: 420 PVLETGSDLQGSADVISAAVHEFRIPPKALLGLHSYCPVHFDTFHSVLVDLSVHIILLKA 599
           P+ +T  +L    D  S AVHEFRIPPKALLGLHSYCPVHFD FHSVLVD+SVHI LLKA
Sbjct: 123 PMTDTMVELLAYPDASSVAVHEFRIPPKALLGLHSYCPVHFDAFHSVLVDVSVHISLLKA 182

Query: 600 GTY------------SGSGTTEDYELFSRNDKLSGEGIYVHPKSIAFMKAMLTARDILVD 743
           G++            +G         FS +  +    + +  K I  +KA+L AR+ L++
Sbjct: 183 GSFLKVLRFCTVQASNGLSGLTVTIFFSNHSLVFLASLDI--KKITLVKALLAARNTLLE 240

Query: 744 ELHKISKAIGRAIDLTDIASSVGDNKLIGSITKGDLDTVNAEVSEFRIRARQVTSEPQNG 923
           EL KISK I R ID++D AS+V D  +  SI + +L T +  VS           +PQNG
Sbjct: 241 ELQKISKGIERTIDVSDFASNVDDVSMFDSIVQANLVTADVAVSGH--------GKPQNG 292

Query: 924 FQISNGSLDFESDGM 968
            + +N ++DF+SD +
Sbjct: 293 LEKANSTIDFQSDNL 307


>ref|XP_002528165.1| conserved hypothetical protein [Ricinus communis]
           gi|223532422|gb|EEF34216.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 808

 Score =  343 bits (881), Expect = 3e-92
 Identities = 182/307 (59%), Positives = 219/307 (71%), Gaps = 6/307 (1%)
 Frame = +3

Query: 60  MLETVQEIAIYIHRFHNLDLFQQGWYRIKITMRWEDSNYTSPGTPARVVQYEAPDLDSDN 239
           ML+TVQEIAIYIHRFHNLDLFQQGWY+IKI++RWEDS YTS GTPARVVQY++ DL SDN
Sbjct: 40  MLDTVQEIAIYIHRFHNLDLFQQGWYQIKISVRWEDSEYTSVGTPARVVQYDSHDLGSDN 99

Query: 240 IYGLWRIDDIDNSFCTQPFRIKYARQDVLLSVMVSFNVSLGNYEGPSTSAVILKFELMYT 419
            YG+WRIDD DNSF TQPFRIKYA+QD+ LS+M+SFN+SL  + GPSTSAVILKFEL+  
Sbjct: 100 TYGVWRIDDTDNSFSTQPFRIKYAKQDICLSIMISFNLSLSGHMGPSTSAVILKFELLQA 159

Query: 420 PVLETGSDLQGSADVISAAVHEFRIPPKALLGLHSYCPVHFDTFHSVLVDLSVHIILLKA 599
           P+ E   +L    D  S AVHEFRIPPKALLGLHSYCPVHFD FH+VLVDL+VHI LLKA
Sbjct: 160 PITENQLELLAYLDASSVAVHEFRIPPKALLGLHSYCPVHFDAFHAVLVDLTVHISLLKA 219

Query: 600 GTY----SGSGTTEDY--ELFSRNDKLSGEGIYVHPKSIAFMKAMLTARDILVDELHKIS 761
           G+Y    S S   ED   +     +   G    V  K I  +KA+L AR+ L++EL K S
Sbjct: 220 GSYMKVPSYSCIPEDIARQRIDGFNTTLGSMASVDMKQIMLVKALLVARETLLEELQKFS 279

Query: 762 KAIGRAIDLTDIASSVGDNKLIGSITKGDLDTVNAEVSEFRIRARQVTSEPQNGFQISNG 941
           KAI +AIDLTD  S + D +++ SI   +L T + EVS           +PQN  + +NG
Sbjct: 280 KAIEQAIDLTDFTSKMDDVEMLDSIMGSNLGTADGEVSG--------QGKPQNVLEKANG 331

Query: 942 SLDFESD 962
            + F SD
Sbjct: 332 GVYFRSD 338


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