BLASTX nr result

ID: Coptis21_contig00009034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009034
         (1939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275955.2| PREDICTED: B3 domain-containing protein At2g...   231   7e-58
ref|XP_002530522.1| transcription factor, putative [Ricinus comm...   222   3e-55
emb|CBI30344.3| unnamed protein product [Vitis vinifera]              215   3e-53
gb|ADL36565.1| ABI3L domain class transcription factor [Malus x ...   205   3e-50
ref|XP_003537081.1| PREDICTED: B3 domain-containing protein At5g...   200   1e-48

>ref|XP_002275955.2| PREDICTED: B3 domain-containing protein At2g36080-like [Vitis
            vinifera]
          Length = 346

 Score =  231 bits (588), Expect = 7e-58
 Identities = 145/320 (45%), Positives = 174/320 (54%), Gaps = 8/320 (2%)
 Frame = -3

Query: 1787 MPMTDFSSNLQEGLWWNNT--------PPPKSPSSEYKGVIPQPNGRWGAQIYDNQHRVW 1632
            MPM  FS NL E +WW           P P +PSS++K +IP          + +   V 
Sbjct: 1    MPMNHFSPNLPETIWWTQVTQPQPIMEPAPNTPSSKHKPLIP----------HHHHPLVS 50

Query: 1631 LGTFDTQEAATHTYDQALAMFRGTPTPENYPIEDHSHSYSHSTPQESITXXXXXXXXXXX 1452
            L ++ +Q      +   +   R T TP N+ +   +        +E              
Sbjct: 51   LNSYHSQ------HSPPMFPTRST-TPFNFNLNQDTEDDEDEEVEE--VAAEEEEEEVII 101

Query: 1451 XXXXXXXXXKSLTPSDVGKLNRLVIPKQHAEKYFPLQADTVEKGLLLSFEDESRKIWRFR 1272
                     K LTPSDVGKLNRLVIPKQHAEKYFPL  D+ EKGLLLSFEDE  K WRFR
Sbjct: 102  GAERQPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGGDSGEKGLLLSFEDECGKCWRFR 161

Query: 1271 YSYWNSSQSYVLTKGWSRFVKEKKLDAGDVVSFQRRRFDRETLYIRWRRRNAAPTVHDSR 1092
            YSYWNSSQSYVLTKGWSRFVKEK+LDAGDVV FQR R D +  +I WRRR  A    D+ 
Sbjct: 162  YSYWNSSQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRRR--AGPAQDNP 219

Query: 1091 MSQSMTAATTNVXXXXXXSAWTRVYYSAQHPYPSHQHNLHGPLSYQPDGLHAAEPVEQNP 912
             +    A  TN         WTRV+YSA H YPSH H    PL YQPD LHA    +   
Sbjct: 220  AAAPPVAVHTNT--GNTSVGWTRVFYSA-HAYPSHPH--APPLPYQPDCLHAGSVAKNQT 274

Query: 911  VTMKKKKPVRVFGVDLADCQ 852
              +   K +R+FGV+L +CQ
Sbjct: 275  TPVGNSKRLRLFGVNL-ECQ 293


>ref|XP_002530522.1| transcription factor, putative [Ricinus communis]
            gi|223529926|gb|EEF31854.1| transcription factor,
            putative [Ricinus communis]
          Length = 373

 Score =  222 bits (565), Expect = 3e-55
 Identities = 133/334 (39%), Positives = 176/334 (52%), Gaps = 22/334 (6%)
 Frame = -3

Query: 1787 MPMTDFSSNLQEGLWWNNTPPPK----------SPSSEYKGVIPQPNGRWGAQIYDNQHR 1638
            M +  FS +L E LWW+     +          +P++ +K +IP PN  W +  Y + H 
Sbjct: 1    MSINQFSRDLPETLWWSQHQQRQHQQHQSFMEPNPNTAHKPLIPNPNSSWPSHFYQHHHH 60

Query: 1637 ----VWLGTFDT-----QEAATHTYDQALAMFRGTPTPENYPIEDHSHSYSHSTPQESIT 1485
                 WL  +       Q +          +       E  P+E+    Y ++  QE   
Sbjct: 61   HQQNSWLNPYSNSQEPDQMSTAQNPSLTFNLNHEDIEEEQDPLEEQEKHYRNN--QEQHL 118

Query: 1484 XXXXXXXXXXXXXXXXXXXXKSLTPSDVGKLNRLVIPKQHAEKYFPLQADTVEKGLLLSF 1305
                                K LTPSDVGKLNRLVIPKQHAEKYFPL  D+V+KGLLLSF
Sbjct: 119  HQQQHHQEREEQNEKEGMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGGDSVDKGLLLSF 178

Query: 1304 EDESRKIWRFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDVVSFQRRRFDRETLYIRWRR 1125
            EDE  K WRFRYSYWNSSQSYVLTKGWSR+VK+K+LDAGDVV F+R R D E L+I WRR
Sbjct: 179  EDELGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKQLDAGDVVLFERHRLDGERLFIGWRR 238

Query: 1124 RNAAPTVHDSRMSQSMTAATTNVXXXXXXSAWTRVYYSAQHPYP---SHQHNLHGPLSYQ 954
            R+     ++   + S ++++  +        W+RV YS Q   P    H  N+   + YQ
Sbjct: 239  RD-----NNHTNTSSCSSSSGVMVQGSSGGVWSRVLYSQQQHQPYQLGHGANVTTRVPYQ 293

Query: 953  PDGLHAAEPVEQNPVTMKKKKPVRVFGVDLADCQ 852
            PD LHA    +   + +   K  R+FGV+L +CQ
Sbjct: 294  PDCLHAGSGGQNQTIPIGNSKRFRLFGVNL-ECQ 326


>emb|CBI30344.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  215 bits (548), Expect = 3e-53
 Identities = 117/189 (61%), Positives = 130/189 (68%)
 Frame = -3

Query: 1418 LTPSDVGKLNRLVIPKQHAEKYFPLQADTVEKGLLLSFEDESRKIWRFRYSYWNSSQSYV 1239
            LTPSDVGKLNRLVIPKQHAEKYFPL  D+ EKGLLLSFEDE  K WRFRYSYWNSSQSYV
Sbjct: 6    LTPSDVGKLNRLVIPKQHAEKYFPLGGDSGEKGLLLSFEDECGKCWRFRYSYWNSSQSYV 65

Query: 1238 LTKGWSRFVKEKKLDAGDVVSFQRRRFDRETLYIRWRRRNAAPTVHDSRMSQSMTAATTN 1059
            LTKGWSRFVKEK+LDAGDVV FQR R D +  +I WRRR  A    D+  +    A  TN
Sbjct: 66   LTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRRR--AGPAQDNPAAAPPVAVHTN 123

Query: 1058 VXXXXXXSAWTRVYYSAQHPYPSHQHNLHGPLSYQPDGLHAAEPVEQNPVTMKKKKPVRV 879
                     WTRV+YSA H YPSH H    PL YQPD LHA    +     +   K +R+
Sbjct: 124  T--GNTSVGWTRVFYSA-HAYPSHPH--APPLPYQPDCLHAGSVAKNQTTPVGNSKRLRL 178

Query: 878  FGVDLADCQ 852
            FGV+L +CQ
Sbjct: 179  FGVNL-ECQ 186


>gb|ADL36565.1| ABI3L domain class transcription factor [Malus x domestica]
          Length = 382

 Score =  205 bits (522), Expect = 3e-50
 Identities = 133/324 (41%), Positives = 167/324 (51%), Gaps = 10/324 (3%)
 Frame = -3

Query: 1787 MPMTDFSSNLQEGLWWNNTPPPKSPSSEYKGVIPQPNGRWGAQIYDNQHRVWLGTFDTQE 1608
            M +  FSS+L E  WWN    P       +   P     +  Q Y + H         Q 
Sbjct: 1    MSINHFSSDLSETQWWNANSNPHRQEDPSRH--PHSRTHFIPQFYQDTHHHSHAHHSFQP 58

Query: 1607 AATHTYDQALAMFRG---TPTPE-NYPIEDHSHSYSHSTPQESITXXXXXXXXXXXXXXX 1440
               ++ D    M      TPT   N+ +  H     + + Q                   
Sbjct: 59   WQLNSQDPTTPMSPTHFHTPTATLNFNLNHHDAVDPNESGQLQSPPPHHRVNSDDSDDEK 118

Query: 1439 XXXXXKSLTPSDVGKLNRLVIPKQHAEKYFPLQADTVEKGLLLSFEDESRKIWRFRYSYW 1260
                 K LTPSDVGKLNRLVIPKQHAEKYFPL +   + GLLLSFEDES K WRFRYSYW
Sbjct: 119  EPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGSG--DSGLLLSFEDESGKSWRFRYSYW 176

Query: 1259 NSSQSYVLTKGWSRFVKEKKLDAGDVVSFQRRRFDRETLYIRWRRRNAAPTVHDSRMSQS 1080
            NSSQSYVLTKGWSR+VKEK+L+AGDVV F+RRR + + L I WRRRNA P          
Sbjct: 177  NSSQSYVLTKGWSRYVKEKRLNAGDVVLFERRRANTDRLSIGWRRRNAVPAHDSGAGGVE 236

Query: 1079 MTAATTNVXXXXXXSAWTRVYYSAQH---PYPSHQHNLHGPLSYQPDGLHAAEPVEQN-- 915
             ++             WTR++Y A H    YP+HQ++ H    Y PD LHAA    QN  
Sbjct: 237  SSSGGVGGNSSGGGGGWTRMFYFAPHHGSSYPAHQYH-HSVAPYPPDCLHAAGSRVQNMN 295

Query: 914  -PVTMKKKKPVRVFGVDLADCQRR 846
               ++   K +R+FGV+L +CQ++
Sbjct: 296  PTASVGNSKILRLFGVNL-ECQQQ 318


>ref|XP_003537081.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine max]
          Length = 337

 Score =  200 bits (508), Expect = 1e-48
 Identities = 115/209 (55%), Positives = 130/209 (62%), Gaps = 20/209 (9%)
 Frame = -3

Query: 1418 LTPSDVGKLNRLVIPKQHAEKYFPLQADTVE---KGLLLSFEDESRKIWRFRYSYWNSSQ 1248
            LTPSDVGKLNRLVIPKQHAEKYFPL  D+     KGLLLSFEDES K WRFRYSYWNSSQ
Sbjct: 77   LTPSDVGKLNRLVIPKQHAEKYFPLSGDSGGSECKGLLLSFEDESGKCWRFRYSYWNSSQ 136

Query: 1247 SYVLTKGWSRFVKEKKLDAGDVVSFQRRRFDRETLYIRWRRRN----AAPTVHDSRMSQS 1080
            SYVLTKGWSR+VK+K+LDAGDVV F+R R D + L+I WRRR     A P  H S     
Sbjct: 137  SYVLTKGWSRYVKDKRLDAGDVVLFERHRVDAQRLFIGWRRRRQSDAALPPAHVSSRKSG 196

Query: 1079 MTAATTNVXXXXXXSAWTRVYYSAQHPYPSHQHNLHGPLSYQP--DGLHAA--------- 933
                 +N         WTR +YSA HPYP+H  + H P  YQ   D LHA          
Sbjct: 197  GGDGNSN-----KNEGWTRGFYSAHHPYPTHHLHHHQPSPYQQQHDCLHAGRGSQGQNQR 251

Query: 932  -EPVEQNPVTMKKKKPV-RVFGVDLADCQ 852
              PV  N  +      V R+FGVD+ +CQ
Sbjct: 252  MRPVGNNSSSSSSSSRVLRLFGVDM-ECQ 279


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