BLASTX nr result

ID: Coptis21_contig00009030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009030
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF93480.1| class-I knotted1-like homeobox protein IBKN3 [Ip...   144   9e-63
gb|AFZ78625.1| knotted-like protein [Populus tomentosa]               140   1e-61
gb|AAV84585.1| knotted-like homeobox protein [Populus tomentosa]      140   1e-61
ref|XP_002301134.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-61
gb|AAV49802.1| homeobox transcription factor KN3 [Populus tricho...   140   5e-61

>dbj|BAF93480.1| class-I knotted1-like homeobox protein IBKN3 [Ipomoea batatas]
          Length = 266

 Score =  144 bits (363), Expect(2) = 9e-63
 Identities = 68/99 (68%), Positives = 74/99 (74%)
 Frame = +1

Query: 4   IPIFTADGKYDGAGLSDDDQDNSGGETELPEIDPRAEDRELKNHLLKKYSGYXXXXXXXX 183
           + +FT+D K +G G S+DDQDNSGGETELPEIDPRAEDRELKNHLL+KYSGY        
Sbjct: 109 VRVFTSDDKCEGVGSSEDDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLSSLKQEL 168

Query: 184 XXXXXXXXXXXXARQKLLNWWELHYKWPYPSETEKVALA 300
                       ARQKLLNWWELHYKWPYPSETEKVALA
Sbjct: 169 SKKKKKGKLPKEARQKLLNWWELHYKWPYPSETEKVALA 207



 Score =  122 bits (305), Expect(2) = 9e-63
 Identities = 54/59 (91%), Positives = 56/59 (94%)
 Frame = +3

Query: 384 ESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGLHAQNAALYMDGHFMADGNYRLGP 560
           ESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMDGLH QNAALYMDGH+M DG YRLGP
Sbjct: 208 ESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQNAALYMDGHYMGDGPYRLGP 266


>gb|AFZ78625.1| knotted-like protein [Populus tomentosa]
          Length = 368

 Score =  140 bits (353), Expect(2) = 1e-61
 Identities = 67/97 (69%), Positives = 72/97 (74%)
 Frame = +1

Query: 10  IFTADGKYDGAGLSDDDQDNSGGETELPEIDPRAEDRELKNHLLKKYSGYXXXXXXXXXX 189
           IF +D K +G G S+DDQDNSGGETELPEIDPRAEDRELKNHLL+KYSGY          
Sbjct: 213 IFNSDDKSEGVGSSEDDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLGSLKQELSK 272

Query: 190 XXXXXXXXXXARQKLLNWWELHYKWPYPSETEKVALA 300
                     ARQKLL+WWELHYKWPYPSETEKVALA
Sbjct: 273 KKKKGKLPKEARQKLLSWWELHYKWPYPSETEKVALA 309



 Score =  122 bits (305), Expect(2) = 1e-61
 Identities = 53/59 (89%), Positives = 57/59 (96%)
 Frame = +3

Query: 384 ESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGLHAQNAALYMDGHFMADGNYRLGP 560
           E+TGLDQKQINNWFINQRKRHWKPSEDMQF+VMDGLH QNAALYMDGH+M DG+YRLGP
Sbjct: 310 ETTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQNAALYMDGHYMGDGHYRLGP 368


>gb|AAV84585.1| knotted-like homeobox protein [Populus tomentosa]
          Length = 368

 Score =  140 bits (353), Expect(2) = 1e-61
 Identities = 67/97 (69%), Positives = 72/97 (74%)
 Frame = +1

Query: 10  IFTADGKYDGAGLSDDDQDNSGGETELPEIDPRAEDRELKNHLLKKYSGYXXXXXXXXXX 189
           IF +D K +G G S+DDQDNSGGETELPEIDPRAEDRELKNHLL+KYSGY          
Sbjct: 213 IFNSDDKSEGVGSSEDDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLGSLKQELSK 272

Query: 190 XXXXXXXXXXARQKLLNWWELHYKWPYPSETEKVALA 300
                     ARQKLL+WWELHYKWPYPSETEKVALA
Sbjct: 273 KKKKGKLPKEARQKLLSWWELHYKWPYPSETEKVALA 309



 Score =  122 bits (305), Expect(2) = 1e-61
 Identities = 53/59 (89%), Positives = 57/59 (96%)
 Frame = +3

Query: 384 ESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGLHAQNAALYMDGHFMADGNYRLGP 560
           E+TGLDQKQINNWFINQRKRHWKPSEDMQF+VMDGLH QNAALYMDGH+M DG+YRLGP
Sbjct: 310 ETTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQNAALYMDGHYMGDGHYRLGP 368


>ref|XP_002301134.1| predicted protein [Populus trichocarpa] gi|222842860|gb|EEE80407.1|
           predicted protein [Populus trichocarpa]
           gi|225626279|gb|ACN97189.1| KNOX transcription factor
           [Populus trichocarpa]
          Length = 368

 Score =  140 bits (353), Expect(2) = 1e-61
 Identities = 67/97 (69%), Positives = 72/97 (74%)
 Frame = +1

Query: 10  IFTADGKYDGAGLSDDDQDNSGGETELPEIDPRAEDRELKNHLLKKYSGYXXXXXXXXXX 189
           IF +D K +G G S+DDQDNSGGETELPEIDPRAEDRELKNHLL+KYSGY          
Sbjct: 213 IFNSDDKSEGVGSSEDDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLGSLKQELSK 272

Query: 190 XXXXXXXXXXARQKLLNWWELHYKWPYPSETEKVALA 300
                     ARQKLL+WWELHYKWPYPSETEKVALA
Sbjct: 273 KKKKGKLPKEARQKLLSWWELHYKWPYPSETEKVALA 309



 Score =  122 bits (305), Expect(2) = 1e-61
 Identities = 53/59 (89%), Positives = 57/59 (96%)
 Frame = +3

Query: 384 ESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGLHAQNAALYMDGHFMADGNYRLGP 560
           E+TGLDQKQINNWFINQRKRHWKPSEDMQF+VMDGLH QNAALYMDGH+M DG+YRLGP
Sbjct: 310 ETTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQNAALYMDGHYMGDGHYRLGP 368


>gb|AAV49802.1| homeobox transcription factor KN3 [Populus trichocarpa x Populus
           deltoides]
          Length = 368

 Score =  140 bits (353), Expect(2) = 5e-61
 Identities = 67/97 (69%), Positives = 72/97 (74%)
 Frame = +1

Query: 10  IFTADGKYDGAGLSDDDQDNSGGETELPEIDPRAEDRELKNHLLKKYSGYXXXXXXXXXX 189
           IF +D K +G G S+DDQDNSGGETELPEIDPRAEDRELKNHLL+KYSGY          
Sbjct: 213 IFNSDDKSEGVGSSEDDQDNSGGETELPEIDPRAEDRELKNHLLRKYSGYLGSLKQELSK 272

Query: 190 XXXXXXXXXXARQKLLNWWELHYKWPYPSETEKVALA 300
                     ARQKLL+WWELHYKWPYPSETEKVALA
Sbjct: 273 KKKKGKLPKEARQKLLSWWELHYKWPYPSETEKVALA 309



 Score =  120 bits (300), Expect(2) = 5e-61
 Identities = 53/59 (89%), Positives = 56/59 (94%)
 Frame = +3

Query: 384 ESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGLHAQNAALYMDGHFMADGNYRLGP 560
           E+TGLDQKQINNWFINQRKRHWKPSEDMQF+VMDGLH QNAALYMDGH M DG+YRLGP
Sbjct: 310 ETTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHPQNAALYMDGHSMGDGHYRLGP 368


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