BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009018
         (1534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   229   2e-57
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   171   5e-40
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   169   1e-39
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   166   1e-38
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-38

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  229 bits (583), Expect = 2e-57
 Identities = 142/391 (36%), Positives = 206/391 (52%), Gaps = 11/391 (2%)
 Frame = -2

Query: 1284 IALVKEMSLNSFSGLPEDILRLIAEKIDLIVDFVRFGAVCKSWRSVTLDKRHFSLFLKPL 1105
            I  + +  +  +S +P+D L+LIAEK+  + D+VRFG VCKSW S+  DK       K  
Sbjct: 911  IQKINQTVMADWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKS- 969

Query: 1104 PWLMLTADDGEEIRSFFSPFENKIYRLNLPKASGCHCWGSPFGWVVTVGFDHKVHMLNXX 925
            PWLML   +  EIR F+SP   K+Y + LP+  G  CWGSP+GW+VT+G D  + +LN  
Sbjct: 970  PWLMLAEKENSEIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPL 1029

Query: 924  XXXXXXXXXXXAFND--RYFDAKSPG-KNRMSYITKAXXXXXXXXSIAEEQFLVLIIYGG 754
                       A  +     D+ + G +++  +I KA          +     V+IIY  
Sbjct: 1030 TRVQILLPSLRACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAP----SSPDCAVMIIYSD 1085

Query: 753  CNSLAFARPGDETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTYGLPSSQSTIFA 574
               LAF +PG +TWT +   +  V D +YFNG F AVN    V +CD  G  S   TI  
Sbjct: 1086 YGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISG--SQLKTIRF 1143

Query: 573  RPPPNVKGVDRF-----YILELQGELHLVVRALDFGT---DVPAIEFHHQLKTKLIEVYK 418
               P ++ VD       Y++E  GE+++V R L + T   D+P       ++T    V K
Sbjct: 1144 AAAPALQDVDEIEYEAKYLVESGGEIYMVTRNL-YDTARRDIP------YMRTWTFSVLK 1196

Query: 417  FDFCTRKWEELQNLGDHAIFIGSNNSVSLKASDFPGCKPSCIYFTDDHNKASGRLVGHDM 238
             D C ++WEE++NL   + F+G+N+S S  ASD+P  + + IYFTDD+          DM
Sbjct: 1197 LDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNIPRNFDM 1256

Query: 237  GIFNMDTGEIERLYEGGDSLSRYSPPVWITP 145
            GI+N    +IE    G D+LS +S P+WI P
Sbjct: 1257 GIYNFQNTQIEHYPVGHDALSMFSAPLWIRP 1287


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  171 bits (433), Expect = 5e-40
 Identities = 128/394 (32%), Positives = 183/394 (46%), Gaps = 24/394 (6%)
 Frame = -2

Query: 1251 FSGLPEDILRLIAEKIDLIVDFVRFGAVCKSWR-SVTLDKRHFSLFLKPLPWLMLTADDG 1075
            +S L  ++L  IA+K  +  D+VRF AVC +WR SV     H       LPWLML     
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPT---QLPWLMLPQSQP 60

Query: 1074 EEI-RSFFSPFENKIYRLNLPKASGCHCW-GSPFGWVVTVGFDHKVHMLNXXXXXXXXXX 901
                R FFS   NK + L LP+AS      GS  GW++ +    ++ +LN          
Sbjct: 61   HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120

Query: 900  XXXAFND-----------RYFDAKSPG--------KNRMSYITKAXXXXXXXXSIAEEQF 778
                F +            Y    S G        K R S+I K               F
Sbjct: 121  PLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANG---SDF 177

Query: 777  LVLIIYGGCNSLAFARPGDETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTYGLP 598
            + ++I      LA  R  D++WT +        D ++  G FYAVN +G + +CD  G  
Sbjct: 178  IAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSS 237

Query: 597  SSQSTIFARPPPNVKGVDRFYILELQGELHLVVRALDFGTDVPAIEFHHQLKTKLIEVYK 418
               S I     P   G D  Y++E   EL LV R LD   DV   +     +T   +V +
Sbjct: 238  PRVSII---EMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCR 294

Query: 417  FDFCTRKWEELQNLGDHAIFIGSNNSVSLKASDFPGCKPSCIYFTDDHNKASGRLVG--H 244
             D    +WE + +LGD A+F+G N S+SL + DFPGCK +CIY+TDD+++ +   +G   
Sbjct: 295  LDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQ 354

Query: 243  DMGIFNMDTGEIERLYEGGDSLSRYSPPVWITPH 142
            D+GIFN++ G IE L        R+ PP+W+TP+
Sbjct: 355  DLGIFNLEDGSIEPL-PCSHFRIRWPPPLWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  169 bits (429), Expect = 1e-39
 Identities = 128/394 (32%), Positives = 183/394 (46%), Gaps = 24/394 (6%)
 Frame = -2

Query: 1251 FSGLPEDILRLIAEKIDLIVDFVRFGAVCKSWR-SVTLDKRHFSLFLKPLPWLMLTADDG 1075
            +S L  ++L  IA+K  +  D+VRF AVC +WR SV     H       LPWLML     
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPT---QLPWLMLPQSQP 60

Query: 1074 EEI-RSFFSPFENKIYRLNLPKASGCHCW-GSPFGWVVTVGFDHKVHMLNXXXXXXXXXX 901
                R FFS   NK + L LP+AS      GS  GW++ +    ++ +LN          
Sbjct: 61   HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120

Query: 900  XXXAFND-----------RYFDAKSPG--------KNRMSYITKAXXXXXXXXSIAEEQF 778
                F +            Y    S G        K R S+I K               F
Sbjct: 121  PLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANG---SDF 177

Query: 777  LVLIIYGGCNSLAFARPGDETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTYGLP 598
            + ++I      LA  R  D++WT +        D ++  G FYAVN +G + +CD  G  
Sbjct: 178  IAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSS 237

Query: 597  SSQSTIFARPPPNVKGVDRFYILELQGELHLVVRALDFGTDVPAIEFHHQLKTKLIEVYK 418
               S I     P   G D  Y++E   EL LV R LD   DV   +     +T   +V +
Sbjct: 238  PRVSII---EMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCR 294

Query: 417  FDFCTRKWEELQNLGDHAIFIGSNNSVSLKASDFPGCKPSCIYFTDDHNKASGRLVG--H 244
             D    +WE + +LGD A+F+G N S+SL + DFPGCK +CIY+TDD+++ +   +G   
Sbjct: 295  LDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQ 354

Query: 243  DMGIFNMDTGEIERLYEGGDSLSRYSPPVWITPH 142
            D+GIFN++ G IE L        R+ PP+W+TP+
Sbjct: 355  DLGIFNLEDGSIEPL-PCSHFRIRWPPPLWVTPN 387


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  166 bits (421), Expect = 1e-38
 Identities = 123/402 (30%), Positives = 193/402 (48%), Gaps = 32/402 (7%)
 Frame = -2

Query: 1251 FSGLPEDILRLIAEKIDLIVDFVRFGAVCKSWR-SVTLDKRHFSLFLKPLPWLMLT---A 1084
            +S LP +++ +I++ + +  D++   AVC +WR S+     H       LPWLML    +
Sbjct: 5    WSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLP---PQLPWLMLPQSQS 61

Query: 1083 DDGEEIRSFFSPFENKIYRLNLPKAS--GCHCWGSPFGWVVTVGFDHKVHMLNXXXXXXX 910
               +  R+FFS   NK + LNLP+ S    HC GS  GW++ +     + ++N       
Sbjct: 62   QSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHC-GSSHGWLMILDDTPTILLINPLTRAKL 120

Query: 909  XXXXXXAF-NDRYFDAKSPGKN------------------RMSYITKAXXXXXXXXSIAE 787
                  +F N   F+    G+                   R S+I K          + +
Sbjct: 121  SLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSP---LKD 177

Query: 786  EQFLVLIIYGGCNSLAFARPGDETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTY 607
              F+V+ I    + LA+ R GD++W+ +        D ++ NG FYAVN  G + +CD  
Sbjct: 178  NNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICD-- 235

Query: 606  GLPSSQSTIFARPPPNVKGVDRFYILELQGELHLVVRALD--FGTDVPAIEFHHQLKTKL 433
             + S    +     P   G D  Y++    EL LV R LD  +  D P +E H   +T  
Sbjct: 236  -ISSDSPRVSFMETPRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIR 294

Query: 432  IEVYKFDFCTRKWEELQNLGDHAIFIGSNNSVSLKASDFPGCKPSCIYFTDDHNKAS--G 259
             EV++ D+   +W  +  LGD A+FIG N+S+SL A+DF GC  +CIY+TDD+  A+  G
Sbjct: 295  FEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDG 354

Query: 258  RLVGHDMGIFNMDTGEIERL---YEGGDSLSRYSPPVWITPH 142
                HD+GIF +    IE L        S  ++SPP+W++P+
Sbjct: 355  HFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPN 396


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  165 bits (417), Expect = 3e-38
 Identities = 121/396 (30%), Positives = 182/396 (45%), Gaps = 29/396 (7%)
 Frame = -2

Query: 1242 LPEDILRLIAEKIDLIVDFVRFGAVCKSWRS-VTLDKRHFSLFLKPLPWLMLTADDGEE- 1069
            LP +++ +I++KI +  D++ F AVC +W+S +     H       LPWL+L      + 
Sbjct: 8    LPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLP---PQLPWLLLPQSQSNQS 64

Query: 1068 -IRSFFSPFENKIYRLNLPKASGC--HCWGSPFGWVVTVGFDHKVHMLNXXXXXXXXXXX 898
              R+FF+    K + LNLP+AS    HC GS  GW++ +     + ++N           
Sbjct: 65   SYRAFFNLSTYKFHSLNLPEASHRKKHC-GSSHGWLIILDDSPSILVINPLTRRKIHLPA 123

Query: 897  XXAF-NDRYFDAKSPGKN------------------RMSYITKAXXXXXXXXSIAEEQFL 775
              +F N   FD  + G+                   R  +I K            +  F+
Sbjct: 124  ISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGDF-FV 182

Query: 774  VLIIYGGCNSLAFARPGDETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTYGLPS 595
             + I      LA+ + GDE W  +        D +YFNG FYAVN  G + +CD  G  +
Sbjct: 183  AMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNG--N 240

Query: 594  SQSTIFARPPPNVKGVDRFYILELQGELHLVVRALDFGTDVPAIEFHHQLKTKLIEVYKF 415
            S    F   P  + G D  Y++     L LV R LD   +     +    KT   EV+K 
Sbjct: 241  SPKVSFIETPRQIGG-DMQYLVSSGDGLLLVTRYLDLDVEFDIFIY----KTARFEVFKL 295

Query: 414  DFCTRKWEELQNLGDHAIFIGSNNSVSLKASDFPGCKPSCIYFTDDH--NKASGRLVGHD 241
            D    +WE + +LGD  +FIG N+S++L AS   GC   CIY+TDD+  N   G +  HD
Sbjct: 296  DLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHD 355

Query: 240  MGIFNMDTGEIERL---YEGGDSLSRYSPPVWITPH 142
            +GIF +  G IE L        S  ++ PP+WI+P+
Sbjct: 356  LGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPN 391