BLASTX nr result
ID: Coptis21_contig00009017
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00009017
(1712 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis... 700 0.0
emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera] 699 0.0
ref|XP_002517101.1| ATP-dependent helicase NAM7, putative [Ricin... 669 0.0
ref|XP_003517564.1| PREDICTED: probable RNA helicase SDE3-like [... 667 0.0
ref|XP_002512265.1| ATP-dependent helicase NAM7, putative [Ricin... 664 0.0
>ref|XP_002282919.1| PREDICTED: probable RNA helicase SDE3 [Vitis vinifera]
gi|297737082|emb|CBI26283.3| unnamed protein product
[Vitis vinifera]
Length = 877
Score = 700 bits (1806), Expect = 0.0
Identities = 340/536 (63%), Positives = 435/536 (81%), Gaps = 1/536 (0%)
Frame = +1
Query: 103 TGWGSGSDDECSVIGDKGEIGFIDYQIDKSVCNYNPSEEGPVIISVPFPFVSEKPQSVLV 282
TGW DDECSVIGDKGEIGFID++ D SVC+YNPSEEGPV++SVPF F KP+S+ V
Sbjct: 4 TGW----DDECSVIGDKGEIGFIDFENDASVCDYNPSEEGPVVVSVPFAFKG-KPKSIFV 58
Query: 283 GETASDSITINNTTSEPIDLWAVKIFCSNPEDSYTLSLMEPPSANSNNEDIDGFLETFAL 462
GETA+D +T+ NTTSEP++LWAV+IF S PEDS+T+SLMEPPSA + + I FLE+F L
Sbjct: 59 GETATDCVTLENTTSEPVELWAVRIFASTPEDSFTVSLMEPPSAGVDIKYIQEFLESFCL 118
Query: 463 EDRVLQPYKTLTIWLSCKPKETGLHTTVVHFTVGEDTIERVVFLLVEDSISLSIASRKPY 642
EDRVLQP +TLT+W+SCKPKE GLHT+VVHF +G D IERV+FLL ED +S S+A KPY
Sbjct: 119 EDRVLQPGETLTVWVSCKPKEIGLHTSVVHFDLGSDRIERVIFLLAEDRVSQSLAPNKPY 178
Query: 643 SRTQRKNRFAVTEYVSGTRPARPGSQGFRYKLPQFNIPPETRELLESKQLPEVISDGLTR 822
SR RK F V EYV G+RPARP ++ FRY+LPQ+ IP + REL+E KQ+P+ I +GLTR
Sbjct: 179 SRGSRKKVFNVQEYVVGSRPARPNTRSFRYRLPQYVIPNDVRELVEGKQIPDTILEGLTR 238
Query: 823 ESYVAFFSTLITMEELKLEEEMHRHDMECVTMRTR-RYLLALEVPGLAEKRPSLVIGDFV 999
++Y ++F TL+ MEE+++EE+M +DME VTMR + L LEVPGLAEKRPSLV GD++
Sbjct: 239 DNYESYFKTLLIMEEIRMEEDMRSYDMERVTMRRKGTQFLTLEVPGLAEKRPSLVHGDYI 298
Query: 1000 FAKHANDGPTVNTPAYQGFVHRVEADEVFLQFSKDFHLLHRDDNLYNVRFTYNRVNQRRL 1179
FAK A + +P YQGF+HRVEA++V+L F+K+F H D++LYNVRFTYNRVN RRL
Sbjct: 299 FAKLAYEDENDLSPPYQGFIHRVEAEQVYLGFAKEFIWHHTDESLYNVRFTYNRVNMRRL 358
Query: 1180 YQAVQISEKLDDELLFPSQTIRRSIKATPVVQLTRCLNMEQMTSVEMILGCKGAPPYVIH 1359
YQA+ ++ L+ +LLFPS + RR IKAT +V ++ LN EQ+ S++MILGC+GAPPYVIH
Sbjct: 359 YQAIDSAKGLEMDLLFPSDSRRRLIKATHMVPISFNLNEEQIFSIKMILGCRGAPPYVIH 418
Query: 1360 GPPGTGKTLTLVEAMLQLYKTRNNTRILVCASSNSAADHILEKLITMEFVKVEESKIFRL 1539
GPPGTGKT T+VEA+LQLY T+ NTRILVCA SNSAADH+LE+L+ + V+V+ ++IFRL
Sbjct: 419 GPPGTGKTKTMVEAILQLYLTQKNTRILVCAPSNSAADHLLERLLAEKAVEVQGNEIFRL 478
Query: 1540 NATSRPYEDVHPENIRFCYFQDYVFRCPPIKALMRYRIVISTYMSASLLYAEGIKQ 1707
NATSRPYED++P+ IRFC+ +D +F+CPP+ L RYRI+ISTYMSA+LLYAEG+K+
Sbjct: 479 NATSRPYEDMNPDFIRFCFSEDLIFKCPPLNDLKRYRIIISTYMSAALLYAEGVKR 534
>emb|CAN83068.1| hypothetical protein VITISV_014567 [Vitis vinifera]
Length = 877
Score = 699 bits (1803), Expect = 0.0
Identities = 340/536 (63%), Positives = 434/536 (80%), Gaps = 1/536 (0%)
Frame = +1
Query: 103 TGWGSGSDDECSVIGDKGEIGFIDYQIDKSVCNYNPSEEGPVIISVPFPFVSEKPQSVLV 282
TGW DDECSVIGDKGEIGFID++ D SVC+YNPSEEGPV++SVPF F KP+S+ V
Sbjct: 4 TGW----DDECSVIGDKGEIGFIDFENDASVCDYNPSEEGPVVVSVPFAFKG-KPKSIFV 58
Query: 283 GETASDSITINNTTSEPIDLWAVKIFCSNPEDSYTLSLMEPPSANSNNEDIDGFLETFAL 462
GETA+D +T+ NTTSEP++LWAV+IF S PEDS+T+SLMEPPSA + I FLE+F L
Sbjct: 59 GETATDCVTLENTTSEPVELWAVRIFASTPEDSFTVSLMEPPSAGVXIKYIQEFLESFCL 118
Query: 463 EDRVLQPYKTLTIWLSCKPKETGLHTTVVHFTVGEDTIERVVFLLVEDSISLSIASRKPY 642
EDRVLQP +TLT+W+SCKPKE GLHT+VVHF +G D IERV+FLL ED +S S+A KPY
Sbjct: 119 EDRVLQPGETLTVWVSCKPKEIGLHTSVVHFDLGSDRIERVIFLLAEDRVSQSLAPNKPY 178
Query: 643 SRTQRKNRFAVTEYVSGTRPARPGSQGFRYKLPQFNIPPETRELLESKQLPEVISDGLTR 822
SR RK F V EYV G+RPARP ++ FRY+LPQ+ IP + REL+E KQ+P+ I +GLTR
Sbjct: 179 SRGSRKKVFNVQEYVVGSRPARPNARSFRYRLPQYVIPNDVRELVEGKQIPDTILEGLTR 238
Query: 823 ESYVAFFSTLITMEELKLEEEMHRHDMECVTMRTR-RYLLALEVPGLAEKRPSLVIGDFV 999
++Y ++F TL+ MEE+++EE+M +DME VTMR + L LEVPGLAEKRPSLV GD++
Sbjct: 239 DNYESYFKTLLIMEEIRMEEDMRSYDMERVTMRRKGTQFLTLEVPGLAEKRPSLVHGDYI 298
Query: 1000 FAKHANDGPTVNTPAYQGFVHRVEADEVFLQFSKDFHLLHRDDNLYNVRFTYNRVNQRRL 1179
FAK A + ++P YQGF+HRVEA++V+L F+++F H D++LYNVRFTYNRVN RRL
Sbjct: 299 FAKLAYEDENDSSPPYQGFIHRVEAEQVYLGFAREFIWHHTDESLYNVRFTYNRVNMRRL 358
Query: 1180 YQAVQISEKLDDELLFPSQTIRRSIKATPVVQLTRCLNMEQMTSVEMILGCKGAPPYVIH 1359
YQA+ ++ L+ +LLFPS + RR IKAT +V ++ LN EQ+ S++MILGC+GAPPYVIH
Sbjct: 359 YQAIDSAKGLEMDLLFPSDSRRRLIKATHMVPISFNLNEEQIFSIKMILGCRGAPPYVIH 418
Query: 1360 GPPGTGKTLTLVEAMLQLYKTRNNTRILVCASSNSAADHILEKLITMEFVKVEESKIFRL 1539
GPPGTGKT TLVEA+LQLY T+ NTRILVCA SNSAADH+LE+L+ + V+V+ ++IFRL
Sbjct: 419 GPPGTGKTKTLVEAILQLYLTQKNTRILVCAPSNSAADHLLERLLAEKAVEVQGNEIFRL 478
Query: 1540 NATSRPYEDVHPENIRFCYFQDYVFRCPPIKALMRYRIVISTYMSASLLYAEGIKQ 1707
NATSRPYED++P+ IRFC +D +F+CPP+ L RYRI+ISTYMSA+LLYAEG+K+
Sbjct: 479 NATSRPYEDMNPDFIRFCISEDLIFKCPPLNDLKRYRIIISTYMSAALLYAEGVKR 534
>ref|XP_002517101.1| ATP-dependent helicase NAM7, putative [Ricinus communis]
gi|223543736|gb|EEF45264.1| ATP-dependent helicase NAM7,
putative [Ricinus communis]
Length = 882
Score = 669 bits (1727), Expect = 0.0
Identities = 334/539 (61%), Positives = 416/539 (77%), Gaps = 1/539 (0%)
Frame = +1
Query: 97 MGTGWGSGSDDECSVIGDKGEIGFIDYQIDKSVCNYNPSEEGPVIISVPFPFVSEKPQSV 276
MGT G DDE SVIGDKGEIGFIDYQ DKSVC+Y+P EEGP+ ISVPFPF + KPQSV
Sbjct: 1 MGTIEGKWDDDEYSVIGDKGEIGFIDYQDDKSVCSYDPIEEGPIFISVPFPFENGKPQSV 60
Query: 277 LVGETASDSITINNTTSEPIDLWAVKIFCSNPEDSYTLSLMEPPSANSNNEDIDGFLETF 456
++GETASDSITI NTT E +DLWA KI+ SNP +S+TLSLMEPPSAN N GFLE+F
Sbjct: 61 VLGETASDSITIKNTTDEAVDLWA-KIYASNPNNSFTLSLMEPPSANGGNSS-RGFLESF 118
Query: 457 ALEDRVLQPYKTLTIWLSCKPKETGLHTTVVHFTVGEDTIERVVFLLVEDSISLSIASRK 636
LEDR+LQ +LT+WL+CKP+E GL+TTVV+F VG D IERVVFLL ED IS S+AS+K
Sbjct: 119 NLEDRMLQAGDSLTVWLNCKPQEIGLYTTVVYFDVGSDRIERVVFLLAEDKISRSLASKK 178
Query: 637 PYSRTQRKNRFAVTEYVSGTRPARPGSQGFRYKLPQFNIPPETRELLESKQLPEVISDGL 816
PYSRT+R +F V YV+G+RP R + +LP+++IP E REL+ESKQ P+ ++ GL
Sbjct: 179 PYSRTRRTKQFTVDTYVAGSRPMRKAGWALKNRLPRYDIPMEVRELIESKQTPDAVTGGL 238
Query: 817 TRESYVAFFSTLITMEELKLEEEMHRHDMECVTMRTRRYLLALEVPGLAEKRPSLVIGDF 996
TRE+Y ++F TL+ MEE+ +EE+M +DME V MR +LAL VPGLAE+RPSLV GD+
Sbjct: 239 TRENYASYFKTLLIMEEIHMEEDMRSYDMEGVRMRRMGNVLALMVPGLAERRPSLVYGDY 298
Query: 997 VFAKHANDGPTVNTPAYQGFVHRVEADEVFLQFSKDFHLLHRDDNLYNVRFTYNRVNQRR 1176
+F K AN T T YQG++HRVEADEV L+F FH H D NLY+V FTYNRVN RR
Sbjct: 299 IFVKLANVDKT--TQPYQGYIHRVEADEVHLKFDPQFHTCHSDGNLYDVHFTYNRVNIRR 356
Query: 1177 LYQAVQISEKLDDELLFPSQTI-RRSIKATPVVQLTRCLNMEQMTSVEMILGCKGAPPYV 1353
YQAV +E L+ ELLFPS+ R + P+V +T LN EQM S+EMILGCK APPY+
Sbjct: 357 QYQAVDAAENLEMELLFPSECFGNRLTETAPLVPITCNLNEEQMCSIEMILGCKRAPPYI 416
Query: 1354 IHGPPGTGKTLTLVEAMLQLYKTRNNTRILVCASSNSAADHILEKLITMEFVKVEESKIF 1533
I+GPPGTGKT+T+VEA+LQLYK R +TRILVCA SNSAADH+LEKL+ + + +++IF
Sbjct: 417 IYGPPGTGKTMTIVEAILQLYKNRKDTRILVCAPSNSAADHLLEKLLREKAANIRQNEIF 476
Query: 1534 RLNATSRPYEDVHPENIRFCYFQDYVFRCPPIKALMRYRIVISTYMSASLLYAEGIKQG 1710
RLNATSRP+ D+ + IRFC+F + +F+CPP+ AL RYRI+IST+MSA LYAEG+++G
Sbjct: 477 RLNATSRPFGDIKSDYIRFCFFDELLFKCPPLSALRRYRIIISTFMSACYLYAEGVERG 535
>ref|XP_003517564.1| PREDICTED: probable RNA helicase SDE3-like [Glycine max]
Length = 886
Score = 667 bits (1720), Expect = 0.0
Identities = 317/536 (59%), Positives = 420/536 (78%), Gaps = 1/536 (0%)
Frame = +1
Query: 106 GWGSGSDDECSVIGDKGEIGFIDYQIDKSVCNYNPSEEGPVIISVPFPFVSEKPQSVLVG 285
GW SD+ECSVIG+K EIGF+D++ +KSVC+Y +E P+I+SVPF FV KPQSV VG
Sbjct: 5 GW---SDEECSVIGEKAEIGFLDFEEEKSVCSYIDNEGAPIIVSVPFAFVDGKPQSVSVG 61
Query: 286 ETASDSITINNTTSEPIDLWAVKIFCSNPEDSYTLSLMEPPSANSNNEDIDGFLETFALE 465
+TA D ITI NTT EP+DLW+V IF SNP+D++TLSL EPPSANSN ++ LE+F LE
Sbjct: 62 DTAVDLITIRNTTDEPVDLWSVHIFASNPQDTFTLSLTEPPSANSNADEDQSCLESFTLE 121
Query: 466 DRVLQPYKTLTIWLSCKPKETGLHTTVVHFTVGEDTIERVVFLLVEDSISLSIASRKPYS 645
DRVLQP + L IWLSCK KE G++++VV+F VG++ IERVVFLLVED IS S+AS +PYS
Sbjct: 122 DRVLQPGENLKIWLSCKTKEMGMYSSVVYFDVGDEKIERVVFLLVEDKISKSLASNRPYS 181
Query: 646 RTQRKNRFAVTEYVSGTRPARPGSQGFRYKLPQFNIPPETRELLESKQLPEVISDGLTRE 825
R ++K +F V +V+G+RPA ++ + +LP+++IP + R+LLES ++P+V+ +GLT+
Sbjct: 182 RRKKKEKFVVDTFVAGSRPAGKPTRRYINRLPKYDIPRDIRQLLESNRVPQVVEEGLTKR 241
Query: 826 SYVAFFSTLITMEELKLEEEMHRHDMECVTMRTR-RYLLALEVPGLAEKRPSLVIGDFVF 1002
+Y +FF TLI MEE++LEE+M +DMEC++MR R + LEVPGLAE+RPSLV GDF+F
Sbjct: 242 TYASFFKTLIIMEEIQLEEDMRTYDMECISMRKRANQFVTLEVPGLAERRPSLVHGDFIF 301
Query: 1003 AKHANDGPTVNTPAYQGFVHRVEADEVFLQFSKDFHLLHRDDNLYNVRFTYNRVNQRRLY 1182
K ++ TP YQG++HRVEADE++L+F FH HRD+N Y+V FTYNR+N RRLY
Sbjct: 302 VKLTSERDNNTTPVYQGYIHRVEADEIYLKFDPGFHFYHRDENRYDVHFTYNRINMRRLY 361
Query: 1183 QAVQISEKLDDELLFPSQTIRRSIKATPVVQLTRCLNMEQMTSVEMILGCKGAPPYVIHG 1362
QA + +EKL + LFPS + +R IK T ++ ++ N EQ++S++MILGCKGAPPY+IHG
Sbjct: 362 QAAEAAEKLVTDFLFPSTSRKRHIKTTSLLPISGTFNEEQISSIKMILGCKGAPPYMIHG 421
Query: 1363 PPGTGKTLTLVEAMLQLYKTRNNTRILVCASSNSAADHILEKLITMEFVKVEESKIFRLN 1542
PPGTGKT T+VEA+LQLYK N RILVCA SNSAAD+ILEKL+ + V+ E++IFRLN
Sbjct: 422 PPGTGKTRTMVEAILQLYKYHKNARILVCAPSNSAADYILEKLLAQQDVEFRENEIFRLN 481
Query: 1543 ATSRPYEDVHPENIRFCYFQDYVFRCPPIKALMRYRIVISTYMSASLLYAEGIKQG 1710
A++RPYEDV PE +RFC+F + VF+CPP+ AL+ YRI+ISTYMSASLLYAE + G
Sbjct: 482 ASARPYEDVKPEFVRFCFFDEMVFKCPPVNALIHYRIIISTYMSASLLYAEDVSHG 537
>ref|XP_002512265.1| ATP-dependent helicase NAM7, putative [Ricinus communis]
gi|223548226|gb|EEF49717.1| ATP-dependent helicase NAM7,
putative [Ricinus communis]
Length = 850
Score = 664 bits (1712), Expect = 0.0
Identities = 341/545 (62%), Positives = 421/545 (77%), Gaps = 7/545 (1%)
Frame = +1
Query: 97 MGTGWGSGSDDECSVIGDKGEIGFIDYQIDKSVCNYNPSEEGPVIISVPFPFVSEKPQSV 276
MGT DDE S IGDKG+IGFID++ ++SVCNY+ +EEGPV IS PFP V KPQS+
Sbjct: 1 MGTIKKDNWDDEYSFIGDKGDIGFIDFEDERSVCNYDLNEEGPVAISAPFPLVRRKPQSI 60
Query: 277 LVGETASDSITINNTTSEPIDLWAVKIFCSNPEDSYTLSLMEPPSANSNNEDIDGFLETF 456
L+GET+ S+TI NTTS+P++LW V+IFCSNP DS+TLSLMEP S E++ FLE+
Sbjct: 61 LIGETSKCSVTIANTTSDPVELWGVRIFCSNPADSFTLSLMEP----SKVENVRVFLESC 116
Query: 457 ALEDRVLQPYKTLTIWLSCKPKETGLHTTVVHFTVGEDTIERVVFLLVEDSISLSIASRK 636
+LEDRVLQP++TLTIWLSCKPK GLHT+VVHF V + IERV FLL ED +S ++ +
Sbjct: 117 SLEDRVLQPHETLTIWLSCKPKVMGLHTSVVHFDVDDARIERVAFLLAEDKVSQALTPNR 176
Query: 637 PYSRTQRKNRFAVTEYVSGTRPARPGS-----QGFRYKLPQFNIPPETRELLESKQLPEV 801
PYSRT R+ + + EY S +RP++ S QG +++LP+F IP RELLE+KQ+P+V
Sbjct: 177 PYSRTPRRKQCIMDEYASSSRPSKLHSAKAIAQGSKFRLPEFPIPKGIRELLENKQVPDV 236
Query: 802 ISDGLTRESYVAFFSTLITMEELKLEEEMHRHDMECVTMRTR-RYLLALEVPGLAEKRPS 978
+ +GL R+ Y +FFSTL+ +EEL LE+EM HDMECV MR R LLALEVPGLAE+RPS
Sbjct: 237 LLEGLRRKKYASFFSTLLIIEELHLEKEMRCHDMECVNMRRRGAQLLALEVPGLAERRPS 296
Query: 979 LVIGDFVFAKHANDGPTVNTPAYQGFVHRVEADEVFLQFSKDFHLLHRDDNLYNVRFTYN 1158
LV GD VFAK + TV Y+G +H V ADEV L+F KD H H++ NLYNVRFTYN
Sbjct: 297 LVHGDLVFAKLVSSDSTV----YKGHIHLVGADEVLLKFPKDLHRHHQNWNLYNVRFTYN 352
Query: 1159 RVNQRRLYQAVQISEKLDDELLFPSQ-TIRRSIKATPVVQLTRCLNMEQMTSVEMILGCK 1335
RVN RRLY AV+ +E L+ LLFPSQ T RR IK V T LN EQM VEMILGCK
Sbjct: 353 RVNLRRLYHAVEAAESLEPYLLFPSQSTQRRLIKTARFVPFTGGLNAEQMHCVEMILGCK 412
Query: 1336 GAPPYVIHGPPGTGKTLTLVEAMLQLYKTRNNTRILVCASSNSAADHILEKLITMEFVKV 1515
GAPPYVI+GPPGTGKT+TLVEA+LQ+Y TRN+ ILVCASSNSAADHILEKL + E KV
Sbjct: 413 GAPPYVIYGPPGTGKTMTLVEAVLQVYATRNDGTILVCASSNSAADHILEKLTSHEVAKV 472
Query: 1516 EESKIFRLNATSRPYEDVHPENIRFCYFQDYVFRCPPIKALMRYRIVISTYMSASLLYAE 1695
+ES+IFRLN +SRPYED+ P++IRFCYF++ +FRCPPI+ALMR++I+ISTYMS+SLL+AE
Sbjct: 473 KESEIFRLNGSSRPYEDLQPDHIRFCYFEESIFRCPPIEALMRFKIIISTYMSSSLLFAE 532
Query: 1696 GIKQG 1710
GIK+G
Sbjct: 533 GIKRG 537