BLASTX nr result
ID: Coptis21_contig00009004
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00009004
(2352 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 690 0.0
ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 690 0.0
ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 687 0.0
ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putativ... 679 0.0
ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|2... 672 0.0
>ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 2
[Vitis vinifera]
Length = 828
Score = 690 bits (1781), Expect = 0.0
Identities = 348/546 (63%), Positives = 416/546 (76%), Gaps = 7/546 (1%)
Frame = -2
Query: 2234 RYAPEDPTLPKPWRGLIDGKTGYLYFWNPTTNVTQYQKPLAPTESAPLXXXXXXXXXXXS 2055
RYAPEDPTLPKPW+GL+DGKTGYLYFWNP TNVTQY++P P S+
Sbjct: 9 RYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPERPGASSNASLAPPPKSSASI 68
Query: 2054 TE----KQPRDTSNEEDGCNGGGPKSAVTNGLTQQSMRSEVGHFNEVS---ANANPGGSD 1896
+ +Q + G N K L QQS R H ++ A GGS
Sbjct: 69 SSSVQVQQSSQGQRRDHGLNEEDDKYNRARNL-QQSARGGTVHSHDPPNGIVGAGHGGSS 127
Query: 1895 VDNKMCNGQVXXXXXXXXXXXXXXXXXXXSYRRQHEITVVGNNVPPPFTSFEATGFPPEL 1716
V + +G SYRR+HEITV G++VP PFTSFE+TGFPPE+
Sbjct: 128 VRGQGSSGP-------------GSGASTESYRRRHEITVTGDDVPQPFTSFESTGFPPEI 174
Query: 1715 LRTVHNAGFSSPTPIQAQTWPIALKNHDIVAIAKTGSGKTLGYLLPGFMHLKRCGKNPKM 1536
+R V++AGFS+PTPIQAQ+WP+AL++ DIVAIAKTGSGKTLGYL+PGF+HLKR NP+M
Sbjct: 175 IREVYSAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNNPQM 234
Query: 1535 GPTVLVLSPTRELATQIQDEAEKFGQSSNISCTCLYGGAQKGPQIRDLEKGVDIVVATPG 1356
GPTVLVLSPTRELATQIQDEA KFG+SS +SCTCLYGGA KGPQ+RDL++G DIVVATPG
Sbjct: 235 GPTVLVLSPTRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVATPG 294
Query: 1355 RLNDILEMGKISLHQISYFVLDEADRMLDMGFEPQIRKIMKEIPAKRQTLMYTATWPKSV 1176
RLNDILEM ++SL Q+SY VLDEADRMLDMGFEPQIRKI+KE+PA+RQTLMYTATWPK V
Sbjct: 295 RLNDILEMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEV 354
Query: 1175 RNIASELLSNPVQVNIGRTDELVANKSISQFVEVVNHADKKRRLQQIMQSQEPRSRILIF 996
R IA++LL NPVQVNIG DELVANK+I+Q+VEV+ + +K +RL+QI++SQEP S+I+IF
Sbjct: 355 RKIAADLLVNPVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKIIIF 414
Query: 995 CSTKRMCDQLVEYIPRHLGVAAIHGDKAQGERDYVLNQFRNGSSPILVATDVAARGLDVK 816
CSTK+MCDQL + R G AAIHGDK+QGERDYVLNQFR G SP+LVATDVAARGLD+K
Sbjct: 415 CSTKKMCDQLARNLTRPFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIK 474
Query: 815 DIRAVINYDFPTGIEDYVHRIXXXXXXXXXXXAYTFFCDKDAKHASDLIKILEGANQKVP 636
DIR VINYDFPTG+EDYVHRI AYTFF ++DAK+ASDL+K+LEGANQ+VP
Sbjct: 475 DIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQRVP 534
Query: 635 PELRNL 618
PE+R++
Sbjct: 535 PEIRDM 540
>ref|XP_002273908.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 1
[Vitis vinifera]
Length = 863
Score = 690 bits (1781), Expect = 0.0
Identities = 348/546 (63%), Positives = 416/546 (76%), Gaps = 7/546 (1%)
Frame = -2
Query: 2234 RYAPEDPTLPKPWRGLIDGKTGYLYFWNPTTNVTQYQKPLAPTESAPLXXXXXXXXXXXS 2055
RYAPEDPTLPKPW+GL+DGKTGYLYFWNP TNVTQY++P P S+
Sbjct: 9 RYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNVTQYERPERPGASSNASLAPPPKSSASI 68
Query: 2054 TE----KQPRDTSNEEDGCNGGGPKSAVTNGLTQQSMRSEVGHFNEVS---ANANPGGSD 1896
+ +Q + G N K L QQS R H ++ A GGS
Sbjct: 69 SSSVQVQQSSQGQRRDHGLNEEDDKYNRARNL-QQSARGGTVHSHDPPNGIVGAGHGGSS 127
Query: 1895 VDNKMCNGQVXXXXXXXXXXXXXXXXXXXSYRRQHEITVVGNNVPPPFTSFEATGFPPEL 1716
V + +G SYRR+HEITV G++VP PFTSFE+TGFPPE+
Sbjct: 128 VRGQGSSGP-------------GSGASTESYRRRHEITVTGDDVPQPFTSFESTGFPPEI 174
Query: 1715 LRTVHNAGFSSPTPIQAQTWPIALKNHDIVAIAKTGSGKTLGYLLPGFMHLKRCGKNPKM 1536
+R V++AGFS+PTPIQAQ+WP+AL++ DIVAIAKTGSGKTLGYL+PGF+HLKR NP+M
Sbjct: 175 IREVYSAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNNPQM 234
Query: 1535 GPTVLVLSPTRELATQIQDEAEKFGQSSNISCTCLYGGAQKGPQIRDLEKGVDIVVATPG 1356
GPTVLVLSPTRELATQIQDEA KFG+SS +SCTCLYGGA KGPQ+RDL++G DIVVATPG
Sbjct: 235 GPTVLVLSPTRELATQIQDEAVKFGRSSRLSCTCLYGGAPKGPQLRDLDRGADIVVATPG 294
Query: 1355 RLNDILEMGKISLHQISYFVLDEADRMLDMGFEPQIRKIMKEIPAKRQTLMYTATWPKSV 1176
RLNDILEM ++SL Q+SY VLDEADRMLDMGFEPQIRKI+KE+PA+RQTLMYTATWPK V
Sbjct: 295 RLNDILEMRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEV 354
Query: 1175 RNIASELLSNPVQVNIGRTDELVANKSISQFVEVVNHADKKRRLQQIMQSQEPRSRILIF 996
R IA++LL NPVQVNIG DELVANK+I+Q+VEV+ + +K +RL+QI++SQEP S+I+IF
Sbjct: 355 RKIAADLLVNPVQVNIGNVDELVANKAITQYVEVLPYMEKHKRLEQILRSQEPGSKIIIF 414
Query: 995 CSTKRMCDQLVEYIPRHLGVAAIHGDKAQGERDYVLNQFRNGSSPILVATDVAARGLDVK 816
CSTK+MCDQL + R G AAIHGDK+QGERDYVLNQFR G SP+LVATDVAARGLD+K
Sbjct: 415 CSTKKMCDQLARNLTRPFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDIK 474
Query: 815 DIRAVINYDFPTGIEDYVHRIXXXXXXXXXXXAYTFFCDKDAKHASDLIKILEGANQKVP 636
DIR VINYDFPTG+EDYVHRI AYTFF ++DAK+ASDL+K+LEGANQ+VP
Sbjct: 475 DIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFAEQDAKYASDLVKVLEGANQRVP 534
Query: 635 PELRNL 618
PE+R++
Sbjct: 535 PEIRDM 540
>ref|XP_004164821.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Cucumis
sativus]
Length = 778
Score = 687 bits (1772), Expect = 0.0
Identities = 354/550 (64%), Positives = 414/550 (75%), Gaps = 11/550 (2%)
Frame = -2
Query: 2234 RYAPEDPTLPKPWRGLIDGKTGYLYFWNPTTNVTQYQKPLAPTESAPLXXXXXXXXXXXS 2055
RYAPEDPTLPKPWRGL+DGKTGYLYFWNP TNVTQY++P+A +APL
Sbjct: 13 RYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPVA---AAPLNSSIVSISSSVQ 69
Query: 2054 TEKQPRDTS--------NEEDGCNGGGPKSAVTNGLTQQSMRSEVGHFNEVSANANPGG- 1902
+K S N++ G PK V G T QS + G N A G
Sbjct: 70 IQKPSSGHSYNNNLNENNDKYGRGSHAPKQEVARGETFQSHDTSNGTPNTGHGGAPLKGH 129
Query: 1901 --SDVDNKMCNGQVXXXXXXXXXXXXXXXXXXXSYRRQHEITVVGNNVPPPFTSFEATGF 1728
SD N + SYR++HEIT G+NVP PF+SFEATGF
Sbjct: 130 RPSDAGNGIS---------------------AESYRQRHEITFSGDNVPAPFSSFEATGF 168
Query: 1727 PPELLRTVHNAGFSSPTPIQAQTWPIALKNHDIVAIAKTGSGKTLGYLLPGFMHLKRCGK 1548
PPE+LR VHNAGFS+PTPIQAQ+WPIAL++ DIVAIAKTGSGKTLGYL+PGF+HLKR
Sbjct: 169 PPEILREVHNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRN 228
Query: 1547 NPKMGPTVLVLSPTRELATQIQDEAEKFGQSSNISCTCLYGGAQKGPQIRDLEKGVDIVV 1368
+PK+GPTVLVLSPTRELATQIQDEA KFG+SS ISC CLYGGA KG Q+RD+++GVDIVV
Sbjct: 229 DPKLGPTVLVLSPTRELATQIQDEAVKFGKSSRISCACLYGGAPKGLQLRDIDRGVDIVV 288
Query: 1367 ATPGRLNDILEMGKISLHQISYFVLDEADRMLDMGFEPQIRKIMKEIPAKRQTLMYTATW 1188
ATPGRLNDILEM +ISLHQ+SY VLDEADRMLDMGFEPQIRKI+KE+PA+RQTLMYTATW
Sbjct: 289 ATPGRLNDILEMRRISLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATW 348
Query: 1187 PKSVRNIASELLSNPVQVNIGRTDELVANKSISQFVEVVNHADKKRRLQQIMQSQEPRSR 1008
PK VR IAS+LL NP+QVNIG DELVANKSI+Q +E + +K RRL+QI++SQEP S+
Sbjct: 349 PKEVRKIASDLLVNPIQVNIGNVDELVANKSITQHIEALAPLEKHRRLEQILRSQEPGSK 408
Query: 1007 ILIFCSTKRMCDQLVEYIPRHLGVAAIHGDKAQGERDYVLNQFRNGSSPILVATDVAARG 828
++IFCSTK+MCDQL + R G AAIHGDK+QGERD+VL QFR G +P+LVATDVAARG
Sbjct: 409 VIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQGERDHVLGQFRTGRTPVLVATDVAARG 468
Query: 827 LDVKDIRAVINYDFPTGIEDYVHRIXXXXXXXXXXXAYTFFCDKDAKHASDLIKILEGAN 648
LD+KDIR VINYDFP+G+EDYVHRI AYTFF ++DAK+ASDLIKILEGAN
Sbjct: 469 LDIKDIRVVINYDFPSGVEDYVHRIGRTGRAGATGIAYTFFGEQDAKYASDLIKILEGAN 528
Query: 647 QKVPPELRNL 618
Q+VPPELR++
Sbjct: 529 QRVPPELRDM 538
>ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223539345|gb|EEF40936.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 781
Score = 679 bits (1753), Expect = 0.0
Identities = 347/547 (63%), Positives = 415/547 (75%), Gaps = 8/547 (1%)
Frame = -2
Query: 2234 RYAPEDPTLPKPWRGLIDGKTGYLYFWNPTTNVTQYQKPLA---PTESA--PLXXXXXXX 2070
RYAPEDPTLPKPWRGL+DGKTGYLYFWNP TNVTQY++P+A P++S+ P+
Sbjct: 10 RYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPIATALPSKSSLVPISSSVQVQ 69
Query: 2069 XXXXSTEKQPRDTSNEEDGCNGGGPKSAVTNGLTQQSMRSEVGHFNEVSANANPGG---S 1899
++ G G A TN FN+ NA GG
Sbjct: 70 QSSRRGYSPVKEEDRYGRGNGSGSKPDAGTN-------------FNQ---NAKGGGFQSQ 113
Query: 1898 DVDNKMCNGQVXXXXXXXXXXXXXXXXXXXSYRRQHEITVVGNNVPPPFTSFEATGFPPE 1719
+V N NG +YRR+HEI+V G++VPPP T+FEATGFP E
Sbjct: 114 NVPNGTANGPGGPSARGHGSSAGGSILSPEAYRRRHEISVTGDDVPPPLTTFEATGFPSE 173
Query: 1718 LLRTVHNAGFSSPTPIQAQTWPIALKNHDIVAIAKTGSGKTLGYLLPGFMHLKRCGKNPK 1539
+LR V +AGFS PTPIQAQ+WPIAL++ DIVAIAKTGSGKTLGYLLPGF+HLKRC +P+
Sbjct: 174 ILREVLSAGFSVPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPGFIHLKRCRNDPQ 233
Query: 1538 MGPTVLVLSPTRELATQIQDEAEKFGQSSNISCTCLYGGAQKGPQIRDLEKGVDIVVATP 1359
+GPTVLVLSPTRELATQIQDEA KFG+SS ISCTCLYGGA KGPQ+++L++GVDIVVATP
Sbjct: 234 LGPTVLVLSPTRELATQIQDEAVKFGRSSRISCTCLYGGAPKGPQLKELDRGVDIVVATP 293
Query: 1358 GRLNDILEMGKISLHQISYFVLDEADRMLDMGFEPQIRKIMKEIPAKRQTLMYTATWPKS 1179
GRLNDILEM +ISL Q+SY VLDEADRMLDMGFEPQIRKI+KE+P++RQTLMYTATWP+
Sbjct: 294 GRLNDILEMRRISLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPSRRQTLMYTATWPRE 353
Query: 1178 VRNIASELLSNPVQVNIGRTDELVANKSISQFVEVVNHADKKRRLQQIMQSQEPRSRILI 999
VR IA++LL NPVQVNIG DELVANKSI+Q++EV+ +K RRL+QI++SQEP S+I+I
Sbjct: 354 VRKIAADLLVNPVQVNIGNVDELVANKSITQYIEVLAPMEKHRRLEQILRSQEPGSKIII 413
Query: 998 FCSTKRMCDQLVEYIPRHLGVAAIHGDKAQGERDYVLNQFRNGSSPILVATDVAARGLDV 819
FCSTK+MCDQL + R G AAIHGDK+Q ERD+VL+QFR G SP+LVATDVAARGLD+
Sbjct: 414 FCSTKKMCDQLARNLTRTFGAAAIHGDKSQSERDHVLSQFRTGRSPVLVATDVAARGLDI 473
Query: 818 KDIRAVINYDFPTGIEDYVHRIXXXXXXXXXXXAYTFFCDKDAKHASDLIKILEGANQKV 639
KDIR VINYDFPTG+EDYVHRI AYTFF D+DAK+ASDLIK+LEGA+Q+V
Sbjct: 474 KDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQDAKYASDLIKVLEGASQRV 533
Query: 638 PPELRNL 618
PPE+R++
Sbjct: 534 PPEIRDM 540
>ref|XP_002300045.1| predicted protein [Populus trichocarpa] gi|222847303|gb|EEE84850.1|
predicted protein [Populus trichocarpa]
Length = 791
Score = 672 bits (1735), Expect = 0.0
Identities = 342/543 (62%), Positives = 406/543 (74%), Gaps = 4/543 (0%)
Frame = -2
Query: 2234 RYAPEDPTLPKPWRGLIDGKTGYLYFWNPTTNVTQYQKPLAPTESAPLXXXXXXXXXXXS 2055
RYAPEDPTLPKPWRGL+DGKTGYLYFWNP TNVTQY++P P + L
Sbjct: 13 RYAPEDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPTLPKSVSSLPITSSVQVHQS- 71
Query: 2054 TEKQPRDTSNEED----GCNGGGPKSAVTNGLTQQSMRSEVGHFNEVSANANPGGSDVDN 1887
+ + + E+D N G AVT ++ N+ + A +V N
Sbjct: 72 SHRGYNPSVKEDDRYGRANNAGSKPDAVTRSISSS---------NQSARGAAIQSENVPN 122
Query: 1886 KMCNGQVXXXXXXXXXXXXXXXXXXXSYRRQHEITVVGNNVPPPFTSFEATGFPPELLRT 1707
NG +YRR+HEITV G+ VPPP TSFE TGFP E+L+
Sbjct: 123 GTANG---LSARVYGSSAGGSGMSGEAYRRRHEITVTGDEVPPPLTSFETTGFPSEILKE 179
Query: 1706 VHNAGFSSPTPIQAQTWPIALKNHDIVAIAKTGSGKTLGYLLPGFMHLKRCGKNPKMGPT 1527
V NAGFS+PTPIQAQ+WPIAL++ DIVA+AKTGSGKTLGYL+PGF+HLKR +P++GPT
Sbjct: 180 VLNAGFSAPTPIQAQSWPIALQSRDIVAVAKTGSGKTLGYLIPGFIHLKRSCNDPRLGPT 239
Query: 1526 VLVLSPTRELATQIQDEAEKFGQSSNISCTCLYGGAQKGPQIRDLEKGVDIVVATPGRLN 1347
VLVLSPTRELATQIQ EA KFG+SS SCTCLYGGA KGPQ+++L++G DIVVATPGRLN
Sbjct: 240 VLVLSPTRELATQIQVEAVKFGKSSRFSCTCLYGGAPKGPQLKELDRGADIVVATPGRLN 299
Query: 1346 DILEMGKISLHQISYFVLDEADRMLDMGFEPQIRKIMKEIPAKRQTLMYTATWPKSVRNI 1167
DILEM ++SL Q+SY VLDEADRMLDMGFEPQIRKI+KE+PA+RQTLMYTATWPK VR I
Sbjct: 300 DILEMRRVSLSQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKI 359
Query: 1166 ASELLSNPVQVNIGRTDELVANKSISQFVEVVNHADKKRRLQQIMQSQEPRSRILIFCST 987
A++LL NPVQVNIG DELVANKSI+Q+VE++ +K RRL+QI++SQE S+I+IFCST
Sbjct: 360 AADLLVNPVQVNIGNVDELVANKSITQYVELLAPLEKHRRLEQILRSQESGSKIIIFCST 419
Query: 986 KRMCDQLVEYIPRHLGVAAIHGDKAQGERDYVLNQFRNGSSPILVATDVAARGLDVKDIR 807
K+MCDQL + R G AAIHGDK+Q ERDYVL+QFR G SPILVATDVAARGLD+KDIR
Sbjct: 420 KKMCDQLSRNLTRQFGAAAIHGDKSQSERDYVLSQFRTGRSPILVATDVAARGLDIKDIR 479
Query: 806 AVINYDFPTGIEDYVHRIXXXXXXXXXXXAYTFFCDKDAKHASDLIKILEGANQKVPPEL 627
VINYDFPTG+EDYVHRI AYTFF D+DAKHASDLIK+LEGANQ+VPPE+
Sbjct: 480 VVINYDFPTGVEDYVHRIGRTGRAGATGVAYTFFGDQDAKHASDLIKVLEGANQQVPPEI 539
Query: 626 RNL 618
R++
Sbjct: 540 RDM 542