BLASTX nr result

ID: Coptis21_contig00009002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009002
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
gb|AFK48292.1| unknown [Lotus japonicus]                               80   3e-13
ref|XP_002283678.1| PREDICTED: uncharacterized protein LOC100257...    80   4e-13
ref|XP_002511462.1| conserved hypothetical protein [Ricinus comm...    80   4e-13
dbj|BAF02556.1| hypothetical protein [Nicotiana benthamiana]           79   6e-13

>ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|222869144|gb|EEF06275.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 46/88 (52%), Positives = 60/88 (68%)
 Frame = +3

Query: 90  MEKKNSYETSWTEQWDYDPNTPARIQRRKDLQNKKQTGDASNKYGKMVAEGFDKTKAVAS 269
           M   +S+ETSW +QWDY+P+ PA     KD      + D++ KY + V EG  KTK VAS
Sbjct: 1   MSGNSSHETSWADQWDYNPD-PAVYDHSKD-----SSSDSTAKYKQKVGEGLGKTKQVAS 54

Query: 270 TGIEKVKEGATLGFNWIKEKYNKTNQKN 353
           TGI+KVKEG ++GF WIK+KY KT QK+
Sbjct: 55  TGIKKVKEGTSVGFRWIKDKYQKTTQKH 82


>gb|AFK48292.1| unknown [Lotus japonicus]
          Length = 84

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 39/84 (46%), Positives = 54/84 (64%)
 Frame = +3

Query: 102 NSYETSWTEQWDYDPNTPARIQRRKDLQNKKQTGDASNKYGKMVAEGFDKTKAVASTGIE 281
           NSY TSW +QWD  P+ P  +       NK   G A+ KY + + EG  KTK VAS+GI+
Sbjct: 6   NSYGTSWADQWDDGPD-PIMVGSN----NKSNGGGATTKYKEKLGEGLGKTKTVASSGIK 60

Query: 282 KVKEGATLGFNWIKEKYNKTNQKN 353
           K+K+G ++G +WIK KY+K  QK+
Sbjct: 61  KLKDGTSVGIHWIKTKYSKATQKH 84


>ref|XP_002283678.1| PREDICTED: uncharacterized protein LOC100257032 [Vitis vinifera]
          Length = 74

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 37/80 (46%), Positives = 51/80 (63%)
 Frame = +3

Query: 111 ETSWTEQWDYDPNTPARIQRRKDLQNKKQTGDASNKYGKMVAEGFDKTKAVASTGIEKVK 290
           E +W +QWDY+P+  A        +  K  G A++KYGK V EG  KTK  AS G++KVK
Sbjct: 2   ENTWADQWDYNPDPAAD-------KKGKSGGGAASKYGKKVGEGLGKTKVAASHGLKKVK 54

Query: 291 EGATLGFNWIKEKYNKTNQK 350
            G+++G  WIKEKY++T  K
Sbjct: 55  AGSSVGLQWIKEKYHQTTHK 74


>ref|XP_002511462.1| conserved hypothetical protein [Ricinus communis]
           gi|223550577|gb|EEF52064.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 81

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 42/85 (49%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
 Frame = +3

Query: 102 NSYETSWTEQWDYDPNTPARIQRRKDLQNKKQTGDASN-KYGKMVAEGFDKTKAVASTGI 278
           +S ETSW +QWD  P+         D QN K    +S  KY + V EG  KTK VASTG 
Sbjct: 3   SSNETSWADQWDDGPDPV------HDYQNSKSNSTSSTAKYKQKVGEGLGKTKEVASTGF 56

Query: 279 EKVKEGATLGFNWIKEKYNKTNQKN 353
           +KVKEG   GF+WIK+KY K  QK+
Sbjct: 57  KKVKEGTVSGFHWIKDKYQKKTQKH 81


>dbj|BAF02556.1| hypothetical protein [Nicotiana benthamiana]
          Length = 90

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 40/83 (48%), Positives = 52/83 (62%)
 Frame = +3

Query: 102 NSYETSWTEQWDYDPNTPARIQRRKDLQNKKQTGDASNKYGKMVAEGFDKTKAVASTGIE 281
           NS ETSW +QWD  P +       K   +KK   +A++K    V + F KTK+VASTG++
Sbjct: 11  NSQETSWADQWDPAPASX----EYKXFNDKKSGTNATSKISSKVGDTFGKTKSVASTGVK 66

Query: 282 KVKEGATLGFNWIKEKYNKTNQK 350
           KVK GAT GF WIK+K +K  QK
Sbjct: 67  KVKSGATAGFQWIKDKCHKPTQK 89


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