BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008999
         (1453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513003.1| ubiquitin fusion degradaton protein, putativ...   493   e-137
ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation prot...   487   e-135
ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|2...   484   e-134
gb|ABK95938.1| unknown [Populus trichocarpa]                          482   e-133
ref|XP_003630940.1| Ubiquitin fusion degradation protein [Medica...   482   e-133

>ref|XP_002513003.1| ubiquitin fusion degradaton protein, putative [Ricinus communis]
            gi|223548014|gb|EEF49506.1| ubiquitin fusion degradaton
            protein, putative [Ricinus communis]
          Length = 356

 Score =  493 bits (1269), Expect = e-137
 Identities = 246/322 (76%), Positives = 262/322 (81%)
 Frame = -1

Query: 1333 MYFEGYGYHGSSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELH 1154
            M+F+GYGYHG+SFEQTYRCYPASFI+KPQ+ESGDKIIMPPSALDRLASLHIDYPMLFEL 
Sbjct: 36   MFFDGYGYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELR 95

Query: 1153 NTATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVRVKNATLPKGKYVKLQPHTK 974
            N A ER+SHCGVLEFIAEEGMIYMPYWMMEN+LLQEGD VRVKN TLPKG YVKLQPHTK
Sbjct: 96   NDAAERISHCGVLEFIAEEGMIYMPYWMMENLLLQEGDIVRVKNVTLPKGTYVKLQPHTK 155

Query: 973  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVD 794
            DFLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYYIDIVETKP+NAISIIETDCEVD
Sbjct: 156  DFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVD 215

Query: 793  FAPPLDYKEPERAVPPVPSGKAPAQVQEAPVEEEPKFNPFTGVGRRLDGKPLKHQSSPVS 614
            FAPPLDYKEPER  P +P  KA AQV+E P E EPKFNPFTGV RRLDGKPLK Q  PVS
Sbjct: 216  FAPPLDYKEPERTTPSIPQKKATAQVEEVPEETEPKFNPFTGVARRLDGKPLKQQPFPVS 275

Query: 613  SSEPKDKRPEVAXXXXXXXXXXXXXXXXSRQHQGKLVFGSSANRAPKESQKSVXXXXXXX 434
            S   KDK+  V                 +RQ QGKLVFGS+ NRAPKE+QK V       
Sbjct: 276  SQGSKDKQAAV-PSGRGQPSLESSSQNSARQSQGKLVFGSNVNRAPKETQKEVAKETKPE 334

Query: 433  XXXXXXXXKFQAFTGKKYSLKG 368
                    KFQ FTG+KYSLKG
Sbjct: 335  QSQKNEEPKFQPFTGRKYSLKG 356


>ref|XP_002268781.1| PREDICTED: ubiquitin fusion degradation protein 1 homolog [Vitis
            vinifera]
          Length = 319

 Score =  487 bits (1253), Expect = e-135
 Identities = 248/322 (77%), Positives = 262/322 (81%)
 Frame = -1

Query: 1333 MYFEGYGYHGSSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELH 1154
            MYF GYGYHG SFEQ YRCYPASFIDKPQ+ESG KIIMPPSALDRLASLHIDYPMLFEL 
Sbjct: 1    MYFGGYGYHGMSFEQKYRCYPASFIDKPQIESGGKIIMPPSALDRLASLHIDYPMLFELS 60

Query: 1153 NTATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVRVKNATLPKGKYVKLQPHTK 974
            N A +RVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTV+VKN TLPKG YVKLQPHT 
Sbjct: 61   NPAAQRVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVQVKNVTLPKGTYVKLQPHTT 120

Query: 973  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVD 794
            DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKP+NAISIIETDCEVD
Sbjct: 121  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVD 180

Query: 793  FAPPLDYKEPERAVPPVPSGKAPAQVQEAPVEEEPKFNPFTGVGRRLDGKPLKHQSSPVS 614
            FAPPLD+KEPE+ V PVP GKA A+VQEAPVE EPKFNPF GVGRRLDGKP K++  PVS
Sbjct: 181  FAPPLDFKEPEKPVAPVPLGKAAAEVQEAPVEPEPKFNPFCGVGRRLDGKPQKYEPPPVS 240

Query: 613  SSEPKDKRPEVAXXXXXXXXXXXXXXXXSRQHQGKLVFGSSANRAPKESQKSVXXXXXXX 434
            SS  KDK+P                   SRQ QGKLVFGS+ NR+PKE+QK         
Sbjct: 241  SSGSKDKQP--VNRGSGQPSAGSSSQSSSRQSQGKLVFGSNVNRSPKETQKEA-AKATKQ 297

Query: 433  XXXXXXXXKFQAFTGKKYSLKG 368
                    KFQ F+GKKYSLKG
Sbjct: 298  EEPKKEEPKFQPFSGKKYSLKG 319


>ref|XP_002313007.1| predicted protein [Populus trichocarpa] gi|222849415|gb|EEE86962.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  484 bits (1245), Expect = e-134
 Identities = 244/324 (75%), Positives = 264/324 (81%), Gaps = 2/324 (0%)
 Frame = -1

Query: 1333 MYFEGYGYHGSSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELH 1154
            M+F+GYGYHG+SFEQTYRCYPASFI+KPQ+ESGDKIIMPPSALDRLASLHIDYPMLFEL 
Sbjct: 1    MFFDGYGYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQ 60

Query: 1153 NTATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVRVKNATLPKGKYVKLQPHTK 974
            N A ERVSHCGVLEFIAEEGMIYMPYWMMEN+LLQEGDTVRVKN TLPKGKYVKLQPHTK
Sbjct: 61   NDAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTK 120

Query: 973  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVD 794
            DFLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYYIDI+ETKP+NAISIIETDCEVD
Sbjct: 121  DFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD 180

Query: 793  FAPPLDYKEPERAVPPVPSGKAPAQVQEAPVEEEPKFNPFTGVGRRLDGKPLKHQSSP-V 617
            FAPPLDYKEPE+ V  VP  KA +Q +E P E EPKFNPFTG GRRLDGKPL +Q  P +
Sbjct: 181  FAPPLDYKEPEKPVASVPPSKATSQAEEVPAETEPKFNPFTGAGRRLDGKPLSYQPPPAL 240

Query: 616  SSSEPKDKRPEVAXXXXXXXXXXXXXXXXSRQHQGKLVFGSSANRAPKESQK-SVXXXXX 440
            SSS  KDK+P VA                +R+ QGKLVFGS+  R PKE+Q+        
Sbjct: 241  SSSVSKDKQPAVA-DGSRQPSLGSSSQNTARKSQGKLVFGSNTGRTPKETQREESGKETK 299

Query: 439  XXXXXXXXXXKFQAFTGKKYSLKG 368
                      KFQAFTGKKYSLKG
Sbjct: 300  QEQPEKKEEPKFQAFTGKKYSLKG 323


>gb|ABK95938.1| unknown [Populus trichocarpa]
          Length = 324

 Score =  482 bits (1240), Expect = e-133
 Identities = 243/323 (75%), Positives = 263/323 (81%), Gaps = 2/323 (0%)
 Frame = -1

Query: 1330 YFEGYGYHGSSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELHN 1151
            +F+GYGYHG+SFEQTYRCYPASFI+KPQ+ESGDKIIMPPSALDRLASLHIDYPMLFEL N
Sbjct: 3    FFDGYGYHGTSFEQTYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQN 62

Query: 1150 TATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVRVKNATLPKGKYVKLQPHTKD 971
             A ERVSHCGVLEFIAEEGMIYMPYWMMEN+LLQEGDTVRVKN TLPKGKYVKLQPHTKD
Sbjct: 63   DAAERVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTKD 122

Query: 970  FLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVDF 791
            FLDISNPKAILETTLRN+SCLTTGDSIMVAYNNKKYYIDI+ETKP+NAISIIETDCEVDF
Sbjct: 123  FLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVDF 182

Query: 790  APPLDYKEPERAVPPVPSGKAPAQVQEAPVEEEPKFNPFTGVGRRLDGKPLKHQSSP-VS 614
            APPLDYKEPE+ V  VP  KA +Q +E P E EPKFNPFTG GRRLDGKPL +Q  P +S
Sbjct: 183  APPLDYKEPEKPVASVPPSKATSQAEEVPAETEPKFNPFTGAGRRLDGKPLSYQPPPALS 242

Query: 613  SSEPKDKRPEVAXXXXXXXXXXXXXXXXSRQHQGKLVFGSSANRAPKESQK-SVXXXXXX 437
            SS  KDK+P VA                +R+ QGKLVFGS+  R PKE+Q+         
Sbjct: 243  SSVSKDKQPAVA-DGSRQPSLGSSSQNTARKSQGKLVFGSNTGRTPKETQREESGKETKQ 301

Query: 436  XXXXXXXXXKFQAFTGKKYSLKG 368
                     KFQAFTGKKYSLKG
Sbjct: 302  EQPEKKEEPKFQAFTGKKYSLKG 324


>ref|XP_003630940.1| Ubiquitin fusion degradation protein [Medicago truncatula]
            gi|355524962|gb|AET05416.1| Ubiquitin fusion degradation
            protein [Medicago truncatula]
          Length = 320

 Score =  482 bits (1240), Expect = e-133
 Identities = 246/322 (76%), Positives = 259/322 (80%)
 Frame = -1

Query: 1333 MYFEGYGYHGSSFEQTYRCYPASFIDKPQLESGDKIIMPPSALDRLASLHIDYPMLFELH 1154
            M+F+GYGYHG+SFEQTYRCYPASFI+KPQLESGDKIIMPPSALDRLASLHIDYPMLFEL 
Sbjct: 1    MFFDGYGYHGTSFEQTYRCYPASFIEKPQLESGDKIIMPPSALDRLASLHIDYPMLFELR 60

Query: 1153 NTATERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDTVRVKNATLPKGKYVKLQPHTK 974
            N A ERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGD VRVKN TLPKG YVKLQPHTK
Sbjct: 61   NAAAERVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDVVRVKNVTLPKGTYVKLQPHTK 120

Query: 973  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPANAISIIETDCEVD 794
            DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVE+KPANAISIIETDCEVD
Sbjct: 121  DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVESKPANAISIIETDCEVD 180

Query: 793  FAPPLDYKEPERAVPPVPSGKAPAQVQEAPVEEEPKFNPFTGVGRRLDGKPLKHQSSPVS 614
            FAPPLDYKEPER V P  +GKAP   +EAP E EPKFNPFTG GRRLDGKPL +Q  PVS
Sbjct: 181  FAPPLDYKEPERPVAPRSAGKAPEADKEAPAETEPKFNPFTGSGRRLDGKPLNYQPPPVS 240

Query: 613  SSEPKDKRPEVAXXXXXXXXXXXXXXXXSRQHQGKLVFGSSANRAPKESQKSVXXXXXXX 434
            SS  KDK P  A                + Q QGKLVFGS+ NR  KE+ K+        
Sbjct: 241  SSGSKDKNP-AAQNVNSQPSTASSSQSNAPQTQGKLVFGSNPNRG-KETGKATEAKAKQE 298

Query: 433  XXXXXXXXKFQAFTGKKYSLKG 368
                    KFQ FTGKKYSL+G
Sbjct: 299  PPKEKEEDKFQPFTGKKYSLRG 320