BLASTX nr result

ID: Coptis21_contig00008997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008997
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793...   119   3e-25
ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248...   114   6e-24
ref|XP_004161204.1| PREDICTED: uncharacterized LOC101212974, par...   106   2e-21
ref|XP_004147423.1| PREDICTED: uncharacterized protein LOC101212...   106   2e-21
ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ric...    99   3e-19

>ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
          Length = 1815

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/107 (56%), Positives = 69/107 (64%), Gaps = 8/107 (7%)
 Frame = +1

Query: 43  PECPVCLQEFNNTDTIPRVLSCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGP 222
           PECPVCLQ F+  D IPRVLSCGHS CE CL +LPQR+Q+TIRCP+C QLV Y + Q GP
Sbjct: 4   PECPVCLQSFDERDAIPRVLSCGHSVCEACLAELPQRYQDTIRCPACTQLVKYPSQQ-GP 62

Query: 223 CSLPKNIDLLSFISQQNPTSLKS--------PKQESSTTLVSQHAFF 339
            SLPKNIDLL    Q +P+   S        P Q S+T     H  F
Sbjct: 63  SSLPKNIDLLRLSLQHSPSPSSSSSSDHSQIPNQRSTTNSCYYHPPF 109


>ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
          Length = 1817

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/110 (50%), Positives = 71/110 (64%)
 Frame = +1

Query: 28  MELILPECPVCLQEFNNTDTIPRVLSCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFN 207
           MEL LPECPVCLQ ++    IPRVL+CGH+ CE C+  LPQRF +TIRCP+C QLV + +
Sbjct: 1   MELQLPECPVCLQTYDTDQAIPRVLACGHTACEACITHLPQRFLDTIRCPACTQLVKFSH 60

Query: 208 DQGGPCSLPKNIDLLSFISQQNPTSLKSPKQESSTTLVSQHAFFLPSFWS 357
            Q GP +LPKNIDLL     ++    K  K+      ++ H  FLP  WS
Sbjct: 61  LQ-GPSALPKNIDLLRLCLSEDSDYQKPQKRP-----ITSHYEFLPRLWS 104


>ref|XP_004161204.1| PREDICTED: uncharacterized LOC101212974, partial [Cucumis sativus]
          Length = 741

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/105 (51%), Positives = 63/105 (60%)
 Frame = +1

Query: 43  PECPVCLQEFNNTDTIPRVLSCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGP 222
           PECPVCLQ ++    +PRVLSCGHS C TCL  LPQRF  TIRCP+CN LV +     G 
Sbjct: 4   PECPVCLQTYDGESIVPRVLSCGHSACGTCLENLPQRFPETIRCPACNVLVKF--PSQGA 61

Query: 223 CSLPKNIDLLSFISQQNPTSLKSPKQESSTTLVSQHAFFLPSFWS 357
            +LPKNIDLL    + N   L S K  S    ++Q   F P  WS
Sbjct: 62  SALPKNIDLLRLCPEPNAGELVSKK--SVKRSINQTHEFFPRLWS 104


>ref|XP_004147423.1| PREDICTED: uncharacterized protein LOC101212974 [Cucumis sativus]
          Length = 761

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/105 (51%), Positives = 63/105 (60%)
 Frame = +1

Query: 43  PECPVCLQEFNNTDTIPRVLSCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGP 222
           PECPVCLQ ++    +PRVLSCGHS C TCL  LPQRF  TIRCP+CN LV +     G 
Sbjct: 4   PECPVCLQTYDGESIVPRVLSCGHSACGTCLENLPQRFPETIRCPACNVLVKF--PSQGA 61

Query: 223 CSLPKNIDLLSFISQQNPTSLKSPKQESSTTLVSQHAFFLPSFWS 357
            +LPKNIDLL    + N   L S K  S    ++Q   F P  WS
Sbjct: 62  SALPKNIDLLRLCPEPNAGELVSKK--SVKRSINQTHEFFPRLWS 104


>ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223540534|gb|EEF42101.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 1794

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 55/105 (52%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = +1

Query: 46  ECPVCLQEFNNTDTIPRVLSCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGPC 225
           ECPVCLQ ++    IPRVL+CGH+TCE+CL  LPQ++  TIRCP+C QLV +     GP 
Sbjct: 5   ECPVCLQNYDGEYAIPRVLTCGHTTCESCLKSLPQKYPQTIRCPACVQLVKF--PSLGPS 62

Query: 226 SLPKNIDLLSFISQQNPTSLKSPKQESSTTLVSQHAFFLPSF-WS 357
           SLPKNIDLL  I    PT+ K  KQ  + +  S H     SF WS
Sbjct: 63  SLPKNIDLLRLI----PTNHKK-KQPINHSRSSDHQVDSASFLWS 102


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