BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008995
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putati...   330   2e-88
ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTP...   324   8e-87
emb|CBI31619.3| unnamed protein product [Vitis vinifera]              319   3e-85
ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   315   4e-84
ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein lig...   313   1e-83

>ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
           gi|223536498|gb|EEF38145.1| Serine/threonine-protein
           kinase Nek8, putative [Ricinus communis]
          Length = 476

 Score =  330 bits (846), Expect = 2e-88
 Identities = 162/227 (71%), Positives = 187/227 (82%), Gaps = 4/227 (1%)
 Frame = -3

Query: 670 ESKLVMMFGYLPGVSPQRSPLITPVVVRLPEVHNDSWKDVSRGGCGFAMAISESGKLITW 491
           + KLV M+GYLPG  PQRSP+++PVVVR       SWKDV  GGCGFAMAISESGKLITW
Sbjct: 16  KEKLVFMWGYLPGALPQRSPILSPVVVR---ADGYSWKDVCGGGCGFAMAISESGKLITW 72

Query: 490 GSTDDMGLSYVTSGKHGELPEPFPLPTEASIVKAAAGWAHCVAVTDAGEVYTWGWKECVP 311
           GSTDD+G SYVTSGKHGE+PEPFPLPTEASI+KAAAGWAHC+A TD GEVYTWGWKEC+P
Sbjct: 73  GSTDDLGQSYVTSGKHGEIPEPFPLPTEASIMKAAAGWAHCIAATDTGEVYTWGWKECIP 132

Query: 310 TGKMIGSQS----TENDVLERNTSLLAEQVSPQSQVSKTSGSVSGFDSRGGAEENTKRRR 143
           +GK+ G  S    TE DV ER++  L EQVSP+SQ S+++G   G D RG  +E+TKRRR
Sbjct: 133 SGKVFGDPSVAGGTEKDVFERHSPFLTEQVSPRSQSSRSTG---GIDGRGSGDESTKRRR 189

Query: 142 ISSAKHAPESSTSGDETQAALPCIVTLNPGVKIATVAAGGRHTLALS 2
           ISSAK + ESS+SGDET +ALPC+VTLNPGV+I TVAAGGRHTLALS
Sbjct: 190 ISSAKQSAESSSSGDETLSALPCLVTLNPGVRITTVAAGGRHTLALS 236


>ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
           vinifera]
          Length = 484

 Score =  324 bits (831), Expect = 8e-87
 Identities = 164/227 (72%), Positives = 187/227 (82%), Gaps = 6/227 (2%)
 Frame = -3

Query: 664 KLVMMFGYLPGVSPQRSPLITPVVVRLP-EVHNDSWKDVSRGGCGFAMAISESGKLITWG 488
           KLV M GYLPG  PQRSPL++P+ VR P  +H  +W+DV  GGCGFAMAISESGKLITWG
Sbjct: 20  KLVFMMGYLPGALPQRSPLLSPIAVRSPASIH--AWRDVCGGGCGFAMAISESGKLITWG 77

Query: 487 STDDMGLSYVTSGKHGELPEPFPLPTEASIVKAAAGWAHCVAVTDAGEVYTWGWKECVPT 308
           STDD+G SYVTSGKHGE PEPFPLPTEASIVKAAAGWAHC +VT+ GEVYTWGWKECVP+
Sbjct: 78  STDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASVTENGEVYTWGWKECVPS 137

Query: 307 GKMIGSQST----ENDVLERNTSLLAEQVSPQSQVSK-TSGSVSGFDSRGGAEENTKRRR 143
           GK+ G  S     E DV ER +S L EQVSP++Q S+ T+G VSG DS+GG EE+TKRRR
Sbjct: 138 GKVFGDPSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGVSGTDSKGGGEESTKRRR 197

Query: 142 ISSAKHAPESSTSGDETQAALPCIVTLNPGVKIATVAAGGRHTLALS 2
           + S+K A ESS SGDET +ALPC+VTLNPGV+IA VAAGGRHTLALS
Sbjct: 198 MLSSKQAAESS-SGDETLSALPCLVTLNPGVRIANVAAGGRHTLALS 243


>emb|CBI31619.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  319 bits (818), Expect = 3e-85
 Identities = 161/223 (72%), Positives = 184/223 (82%), Gaps = 6/223 (2%)
 Frame = -3

Query: 652 MFGYLPGVSPQRSPLITPVVVRLP-EVHNDSWKDVSRGGCGFAMAISESGKLITWGSTDD 476
           M GYLPG  PQRSPL++P+ VR P  +H  +W+DV  GGCGFAMAISESGKLITWGSTDD
Sbjct: 1   MMGYLPGALPQRSPLLSPIAVRSPASIH--AWRDVCGGGCGFAMAISESGKLITWGSTDD 58

Query: 475 MGLSYVTSGKHGELPEPFPLPTEASIVKAAAGWAHCVAVTDAGEVYTWGWKECVPTGKMI 296
           +G SYVTSGKHGE PEPFPLPTEASIVKAAAGWAHC +VT+ GEVYTWGWKECVP+GK+ 
Sbjct: 59  LGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASVTENGEVYTWGWKECVPSGKVF 118

Query: 295 GSQST----ENDVLERNTSLLAEQVSPQSQVSK-TSGSVSGFDSRGGAEENTKRRRISSA 131
           G  S     E DV ER +S L EQVSP++Q S+ T+G VSG DS+GG EE+TKRRR+ S+
Sbjct: 119 GDPSVGGSLEKDVFERQSSFLTEQVSPRTQGSRSTAGGVSGTDSKGGGEESTKRRRMLSS 178

Query: 130 KHAPESSTSGDETQAALPCIVTLNPGVKIATVAAGGRHTLALS 2
           K A ESS SGDET +ALPC+VTLNPGV+IA VAAGGRHTLALS
Sbjct: 179 KQAAESS-SGDETLSALPCLVTLNPGVRIANVAAGGRHTLALS 220


>ref|XP_004150638.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
           gi|449516435|ref|XP_004165252.1| PREDICTED: E3
           ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 491

 Score =  315 bits (808), Expect = 4e-84
 Identities = 156/232 (67%), Positives = 187/232 (80%), Gaps = 9/232 (3%)
 Frame = -3

Query: 670 ESKLVMMFGYLPGVSPQRSPLITPVVVRLP-----EVHNDSWKDVSRGGCGFAMAISESG 506
           ++K+V M+GYLPG  PQRSPL++PVVVRLP     + H   W+DV  GGCGFA+AIS +G
Sbjct: 21  DNKIVFMWGYLPGALPQRSPLLSPVVVRLPGKDATDAHG--WRDVCGGGCGFAVAISANG 78

Query: 505 KLITWGSTDDMGLSYVTSGKHGELPEPFPLPTEASIVKAAAGWAHCVAVTDAGEVYTWGW 326
           KLITWG+TDD+G SYVTSGKHGE PEPFPLPTEASIVKAAAGWAH VA+TD GEVYTWGW
Sbjct: 79  KLITWGATDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHTVAITDRGEVYTWGW 138

Query: 325 KECVPTGKMIGSQST----ENDVLERNTSLLAEQVSPQSQVSKTSGSVSGFDSRGGAEEN 158
           KECVP+GKM    S     E DVLER +S + +QVSP+ Q S++SG VS  ++R G  E+
Sbjct: 139 KECVPSGKMFTDLSAGAAYERDVLERQSSSVIDQVSPRLQASRSSGVVSSIEARAGGAES 198

Query: 157 TKRRRISSAKHAPESSTSGDETQAALPCIVTLNPGVKIATVAAGGRHTLALS 2
           TKRRR+SSAK A ESS+S DET +A+PC+VTLNPGV+I +V+AGGRHTLALS
Sbjct: 199 TKRRRVSSAKLAAESSSSSDETLSAVPCLVTLNPGVRITSVSAGGRHTLALS 250


>ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score =  313 bits (803), Expect = 1e-83
 Identities = 156/227 (68%), Positives = 183/227 (80%), Gaps = 4/227 (1%)
 Frame = -3

Query: 670 ESKLVMMFGYLPGVSPQRSPLITPVVVRLPEVHNDSWKDVSRGGCGFAMAISESGKLITW 491
           + +LV M+GYLPG  PQR+PL+TPV+VR+P     SWKDV  GGCGFAMAISE GKLITW
Sbjct: 17  KERLVYMWGYLPGALPQRTPLLTPVLVRVPP-SGYSWKDVCGGGCGFAMAISEPGKLITW 75

Query: 490 GSTDDMGLSYVTSGKHGELPEPFPLPTEASIVKAAAGWAHCVAVTDAGEVYTWGWKECVP 311
           GSTDD+G SYVTSGKHGE+PEPFPLPTE +IVKAAAGWAHCV+VTD GEVYTWGW+ECVP
Sbjct: 76  GSTDDLGQSYVTSGKHGEIPEPFPLPTEVTIVKAAAGWAHCVSVTDCGEVYTWGWRECVP 135

Query: 310 TGKMIGSQ----STENDVLERNTSLLAEQVSPQSQVSKTSGSVSGFDSRGGAEENTKRRR 143
           +GK+ G      S E DV  R +S L EQVSP+SQ SK++G   G  S    EE++KRRR
Sbjct: 136 SGKVFGESLTGVSPEKDVPGRQSSFLTEQVSPRSQGSKSTG---GTASGTSGEESSKRRR 192

Query: 142 ISSAKHAPESSTSGDETQAALPCIVTLNPGVKIATVAAGGRHTLALS 2
           +SSAK   E+S+S D+TQ ALPC+VTLNPGV+IA+VAAGGRHTLALS
Sbjct: 193 VSSAKQTAETSSSSDDTQTALPCLVTLNPGVRIASVAAGGRHTLALS 239