BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008988
         (1166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867916.1| kelch repeat-containing F-box family protein...    60   1e-06
ref|XP_002867915.1| hypothetical protein ARALYDRAFT_329577 [Arab...    60   1e-06
ref|XP_002868919.1| hypothetical protein ARALYDRAFT_912437 [Arab...    59   2e-06
ref|NP_849411.1| putative F-box/kelch-repeat protein [Arabidopsi...    59   2e-06
emb|CAA19704.1| putative protein [Arabidopsis thaliana] gi|72687...    59   2e-06

>ref|XP_002867916.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297313752|gb|EFH44175.1| kelch
            repeat-containing F-box family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 397

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 40/97 (41%), Positives = 50/97 (51%)
 Frame = -2

Query: 1081 SKIYVIGGLDCDSQMPGYHRIPSSTVQVIDTPSFGKTASMSVGTAMYGGKSSTARAVLDG 902
            S+IYVIGG   DS+       PSSTV+V+D  S     + S+       + +      DG
Sbjct: 149  SEIYVIGG-PVDSE-------PSSTVRVLDCCSHTWRDAPSMTIV----RMNALACFHDG 196

Query: 901  KIYVFGSLAKLTGEPWAEVFDPATNRWEGLPYPSEKV 791
            KIYV G    L  EPWAEVFD  T  W+ LP P  +V
Sbjct: 197  KIYVMGGCQGLEDEPWAEVFDTKTKTWQHLPEPDTEV 233


>ref|XP_002867915.1| hypothetical protein ARALYDRAFT_329577 [Arabidopsis lyrata subsp.
            lyrata] gi|297313751|gb|EFH44174.1| hypothetical protein
            ARALYDRAFT_329577 [Arabidopsis lyrata subsp. lyrata]
          Length = 779

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 40/97 (41%), Positives = 50/97 (51%)
 Frame = -2

Query: 1081 SKIYVIGGLDCDSQMPGYHRIPSSTVQVIDTPSFGKTASMSVGTAMYGGKSSTARAVLDG 902
            S+IYVIGG   DS+       PSSTV+V+D  S     + S+       + +      DG
Sbjct: 531  SEIYVIGG-PVDSE-------PSSTVRVLDCCSHTWRDAPSMTIV----RMNALACFHDG 578

Query: 901  KIYVFGSLAKLTGEPWAEVFDPATNRWEGLPYPSEKV 791
            KIYV G    L  EPWAEVFD  T  W+ LP P  +V
Sbjct: 579  KIYVMGGCQGLEDEPWAEVFDTKTKTWQHLPEPDTEV 615


>ref|XP_002868919.1| hypothetical protein ARALYDRAFT_912437 [Arabidopsis lyrata subsp.
            lyrata] gi|297314755|gb|EFH45178.1| hypothetical protein
            ARALYDRAFT_912437 [Arabidopsis lyrata subsp. lyrata]
          Length = 425

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 44/117 (37%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
 Frame = -2

Query: 1087 LESKIYVIGGLDCDSQMPGYHRIPSSTVQVIDTPS--FGKTASMSVGTAMYGGKSSTARA 914
            L+  IY+IGG+   S        P+S V   D  S  + +  SM V  A      S A  
Sbjct: 133  LDYGIYIIGGIINGS--------PTSEVLRFDCLSHTWRRVRSMRVARA------SAAAN 178

Query: 913  VLDGKIYVFGSLAKLTGEPWAEVFDPATNRWEGLPYP-SEKVINLSKSRVGTPVVYE 746
            V+DGKIYVFG   ++    WAEVFDP T  W+ LP P  +  I  + S +   VV E
Sbjct: 179  VVDGKIYVFGGCEEVDSSNWAEVFDPKTQTWDTLPLPDDDPEIRKNTSMIDKSVVME 235


>ref|NP_849411.1| putative F-box/kelch-repeat protein [Arabidopsis thaliana]
            gi|125991856|sp|P0C2G4.1|FBK84_ARATH RecName:
            Full=F-box/kelch-repeat protein At4g19865
            gi|332658836|gb|AEE84236.1| putative F-box/kelch-repeat
            protein [Arabidopsis thaliana]
          Length = 393

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 2/223 (0%)
 Frame = -2

Query: 1081 SKIYVIGGLDCDSQMPGYHRIPSSTVQVIDTPSFGKTASMSVGTAMYGGKSSTARAVLDG 902
            S+IYV+GG               S V+V+D  S     + S+  +    + +      DG
Sbjct: 147  SEIYVLGGP------------VDSAVRVLDCCSHTWRDAPSMNVS----RMNAWACFHDG 190

Query: 901  KIYVFGSLAKLTGEPWAEVFDPATNRWEGLPYPSEKVINLSKSRVGTPVVYEKQKKILLF 722
            KIYV G    L  EPWAEVF+  T  WEGLP P  +V   S  R G  V+  K    + F
Sbjct: 191  KIYVMGGCQGLKDEPWAEVFNTKTQTWEGLPEPGSEVRKCSIDRSG--VIEGK----IEF 244

Query: 721  YNGICECYFDVSTHLWKY--DLALPIRKDCYMNRGGSVIVDDCLYMFCLPKKELYAYDLV 548
             N    C +D     W+Y  + +  +R +C        ++++  Y F   +   Y  D+ 
Sbjct: 245  GNVNEMCAYDTKLCKWEYCVNKSAALRSEC--------MIENVSYGFWNMRLLWYDNDIQ 296

Query: 547  QGGQDFIPVHGLEKVVESLNLHDRRAGYTRMFHLGNGVICMVW 419
            +    +  + GLE + +    +   +G T       G + ++W
Sbjct: 297  K--DYWKRLEGLESLDDKYMRNGGSSGNTTKLVACGGKLLLLW 337


>emb|CAA19704.1| putative protein [Arabidopsis thaliana] gi|7268783|emb|CAB78989.1|
            putative protein [Arabidopsis thaliana]
          Length = 777

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 2/223 (0%)
 Frame = -2

Query: 1081 SKIYVIGGLDCDSQMPGYHRIPSSTVQVIDTPSFGKTASMSVGTAMYGGKSSTARAVLDG 902
            S+IYV+GG               S V+V+D  S     + S+  +    + +      DG
Sbjct: 531  SEIYVLGGP------------VDSAVRVLDCCSHTWRDAPSMNVS----RMNAWACFHDG 574

Query: 901  KIYVFGSLAKLTGEPWAEVFDPATNRWEGLPYPSEKVINLSKSRVGTPVVYEKQKKILLF 722
            KIYV G    L  EPWAEVF+  T  WEGLP P  +V   S  R G  V+  K    + F
Sbjct: 575  KIYVMGGCQGLKDEPWAEVFNTKTQTWEGLPEPGSEVRKCSIDRSG--VIEGK----IEF 628

Query: 721  YNGICECYFDVSTHLWKY--DLALPIRKDCYMNRGGSVIVDDCLYMFCLPKKELYAYDLV 548
             N    C +D     W+Y  + +  +R +C        ++++  Y F   +   Y  D+ 
Sbjct: 629  GNVNEMCAYDTKLCKWEYCVNKSAALRSEC--------MIENVSYGFWNMRLLWYDNDIQ 680

Query: 547  QGGQDFIPVHGLEKVVESLNLHDRRAGYTRMFHLGNGVICMVW 419
            +    +  + GLE + +    +   +G T       G + ++W
Sbjct: 681  K--DYWKRLEGLESLDDKYMRNGGSSGNTTKLVACGGKLLLLW 721