BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008985
         (2415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein lig...   719   0.0  
ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|2...   720   0.0  
emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]   711   0.0  
ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein lig...   710   0.0  
ref|XP_003601869.1| RCC1 domain-containing protein [Medicago tru...   709   0.0  

>ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
            [Vitis vinifera] gi|296081404|emb|CBI16837.3| unnamed
            protein product [Vitis vinifera]
          Length = 534

 Score =  719 bits (1855), Expect(2) = 0.0
 Identities = 357/475 (75%), Positives = 386/475 (81%)
 Frame = +1

Query: 664  LQATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVL 843
            L+ATCSFF+QPA+FAPD+ELSISELAALDMC KRA+F+PM   E+E LKQRCGGSWKLVL
Sbjct: 74   LEATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMMLEEREVLKQRCGGSWKLVL 133

Query: 844  RFLLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIXX 1023
            RFLLAGEACCRREK QAIAGPGHSI VT KG VYSFGSNSSGQLGHGT +EE RP  I  
Sbjct: 134  RFLLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQI-- 191

Query: 1024 XXXXXXXXXXXXXXRSLQGVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTK 1203
                          RSL+G+RIIQAAAGAGRTMLISDAG VYAFGKDSFGEAEYG QGTK
Sbjct: 192  --------------RSLEGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTK 237

Query: 1204 FVMTPHRLESLKNIFVVQAAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPL 1383
             V TP  +ESLKNIFVVQAAIGNFFTA+LSREGRVYTFSWGNDA LGHQT+ +DLEPHPL
Sbjct: 238  LVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPL 297

Query: 1384 LGPLENVPIVQIXXXXXXXXXXXXQPGGMSVYSVXXXXXXXXXXXSRTDERYPKLIEQFQ 1563
            LG LEN+P+VQI            QP GMSVYSV           +RTDE++P+LIEQF+
Sbjct: 298  LGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFR 357

Query: 1564 TLNLQPXXXXXXXXXXXXXGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALAKIKAVH 1743
             LNLQP             GRDGRVCTWGWGRYGCLGHGNEECESVPKVVEAL  +KAVH
Sbjct: 358  ILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVH 417

Query: 1744 VATGDYTTFVVSEDGDVYSFGCGESSSLGHNAGADGQENRHTNVLTPELVTSLKQVNERF 1923
            VATGDYTTFVVS+DGDVYSFGCGESSSLGHN G DGQ NRH N+L+PELVTSLKQ+ ER 
Sbjct: 418  VATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERM 477

Query: 1924 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGLELAGQQSERGKPELVDID 2088
            VQISLTNSIYWNAHTFALTE+GKLYAFGAGDKGQLG+EL   Q+ERG PE VDID
Sbjct: 478  VQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELVANQTERGNPERVDID 532



 Score =  119 bits (297), Expect(2) = 0.0
 Identities = 55/77 (71%), Positives = 61/77 (79%)
 Frame = +2

Query: 350 MDTTASGTPSIHYHNIVDQXXXXXXXXXXPTFQRQQRHCFGESTPGEFPLAANPSIVLHV 529
           MD T SGTP++ YHNI DQ          PTFQRQQRHCFG+S+PGEFPLAANPSIVLHV
Sbjct: 1   MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60

Query: 530 LTGCNLDPQDLATLEAS 580
           LT CNL+PQDLA LEA+
Sbjct: 61  LTACNLEPQDLAKLEAT 77


>ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|222868979|gb|EEF06110.1|
            predicted protein [Populus trichocarpa]
          Length = 538

 Score =  720 bits (1859), Expect(2) = 0.0
 Identities = 355/473 (75%), Positives = 386/473 (81%)
 Frame = +1

Query: 670  ATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVLRF 849
            ATCSFF+QPA+FAPDYELS+SELAALDMC+KRA+FKPMT  E+++LKQRCGGSWKLVLRF
Sbjct: 80   ATCSFFRQPASFAPDYELSMSELAALDMCQKRAIFKPMTPEERQDLKQRCGGSWKLVLRF 139

Query: 850  LLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIXXXX 1029
            LLAGEACCRRE+ QAIAGPGHSI VTS G  YSFGSNSSGQLGHGT EEE RP  I    
Sbjct: 140  LLAGEACCRRERSQAIAGPGHSIAVTSNGVAYSFGSNSSGQLGHGTTEEEWRPRQI---- 195

Query: 1030 XXXXXXXXXXXXRSLQGVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTKFV 1209
                        RSLQG+RIIQAAAG GRTMLISDAG VYAFGKDSFGEAEYG QGTK V
Sbjct: 196  ------------RSLQGIRIIQAAAGPGRTMLISDAGEVYAFGKDSFGEAEYGVQGTKTV 243

Query: 1210 MTPHRLESLKNIFVVQAAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLG 1389
             TP  +ESLKNIFVVQAAIGNFFTA+LSREGRVYTFSWGND  LGHQT+P+D+ PHPLLG
Sbjct: 244  TTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDGKLGHQTEPNDVVPHPLLG 303

Query: 1390 PLENVPIVQIXXXXXXXXXXXXQPGGMSVYSVXXXXXXXXXXXSRTDERYPKLIEQFQTL 1569
             LEN+P+VQI            QP GMSVYSV           SRTDE+YP+LIEQFQ L
Sbjct: 304  ALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQLL 363

Query: 1570 NLQPXXXXXXXXXXXXXGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALAKIKAVHVA 1749
            NLQP             GRDGRVCTWGWGRYGCLGHGNEECESVPKVV+AL+K+KAVHVA
Sbjct: 364  NLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVDALSKVKAVHVA 423

Query: 1750 TGDYTTFVVSEDGDVYSFGCGESSSLGHNAGADGQENRHTNVLTPELVTSLKQVNERFVQ 1929
            TGDYTTFVVS+DGDVYSFGCGES+SLGHN   DGQ NRHTNVL+PELVTSLK+V ER VQ
Sbjct: 424  TGDYTTFVVSDDGDVYSFGCGESASLGHNGDGDGQGNRHTNVLSPELVTSLKEVKERVVQ 483

Query: 1930 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGLELAGQQSERGKPELVDID 2088
            ISLTNS+YWNAHTFALTESGKL+AFGAGDKGQLG+EL   Q+ERG PE VD+D
Sbjct: 484  ISLTNSVYWNAHTFALTESGKLFAFGAGDKGQLGMELVNNQTERGNPEQVDVD 536



 Score =  115 bits (287), Expect(2) = 0.0
 Identities = 57/88 (64%), Positives = 62/88 (70%)
 Frame = +2

Query: 350 MDTTASGTPSIHYHNIVDQXXXXXXXXXXPTFQRQQRHCFGESTPGEFPLAANPSIVLHV 529
           MD+T SGTP+I YHNI DQ           T+QR QRHCFG+S PGEFPLAANPSIVLHV
Sbjct: 1   MDSTTSGTPTIQYHNITDQPVTAIVAVPVSTYQRNQRHCFGDSIPGEFPLAANPSIVLHV 60

Query: 530 LTGCNLDPQDLATLEASVMILICLIIRK 613
           LT CNLDPQDLA LEA   I  C   R+
Sbjct: 61  LTTCNLDPQDLAKLEAK-SIATCSFFRQ 87


>emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
          Length = 541

 Score =  711 bits (1834), Expect(2) = 0.0
 Identities = 353/468 (75%), Positives = 380/468 (81%)
 Frame = +1

Query: 670  ATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVLRF 849
            ATCSFF+QPA+FAPD+ELSISELAALDMC KRA+F+PM   E+E LKQRCGGSWKLVLRF
Sbjct: 78   ATCSFFRQPAHFAPDFELSISELAALDMCLKRAIFRPMXLEEREVLKQRCGGSWKLVLRF 137

Query: 850  LLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIXXXX 1029
            LLAGEACCRREK QAIAGPGHSI VT KG VYSFGSNSSGQLGHGT +EE RP  I    
Sbjct: 138  LLAGEACCRREKSQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQI---- 193

Query: 1030 XXXXXXXXXXXXRSLQGVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTKFV 1209
                        RSL+G+RIIQAAAGAGRTMLISDAG VYAFGKDSFGEAEYG QGTK V
Sbjct: 194  ------------RSLEGIRIIQAAAGAGRTMLISDAGQVYAFGKDSFGEAEYGVQGTKLV 241

Query: 1210 MTPHRLESLKNIFVVQAAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPLLG 1389
             TP  +ESLKNIFVVQAAIGNFFTA+LSREGRVYTFSWGNDA LGHQT+ +DLEPHPLLG
Sbjct: 242  TTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLG 301

Query: 1390 PLENVPIVQIXXXXXXXXXXXXQPGGMSVYSVXXXXXXXXXXXSRTDERYPKLIEQFQTL 1569
             LEN+P+VQI            QP GMSVYSV           +RTDE++P+LIEQFQ L
Sbjct: 302  ALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQIL 361

Query: 1570 NLQPXXXXXXXXXXXXXGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALAKIKAVHVA 1749
            NLQP             GRDGRVCTWGWGRYGCLGHGNEECESVPKVVEAL  +KAVHVA
Sbjct: 362  NLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALINVKAVHVA 421

Query: 1750 TGDYTTFVVSEDGDVYSFGCGESSSLGHNAGADGQENRHTNVLTPELVTSLKQVNERFVQ 1929
            TGDYTTFVVS+DGDVYSFGCGESSSLGHN G DGQ NRH N+L+PELVTSLKQ+ ER VQ
Sbjct: 422  TGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPDGQGNRHANILSPELVTSLKQIKERMVQ 481

Query: 1930 ISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGLELAGQQSERGKPE 2073
            ISLTNSIYWNAHTFALTE+GKLYAFGAGDKGQLG+EL   Q+ERG PE
Sbjct: 482  ISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELVXNQTERGNPE 529



 Score =  120 bits (300), Expect(2) = 0.0
 Identities = 56/77 (72%), Positives = 61/77 (79%)
 Frame = +2

Query: 350 MDTTASGTPSIHYHNIVDQXXXXXXXXXXPTFQRQQRHCFGESTPGEFPLAANPSIVLHV 529
           MD T SGTP++ YHNI DQ          PTFQRQQRHCFG+S+PGEFPLAANPSIVLHV
Sbjct: 1   MDATRSGTPTVQYHNIPDQPIAAIVTSPLPTFQRQQRHCFGDSSPGEFPLAANPSIVLHV 60

Query: 530 LTGCNLDPQDLATLEAS 580
           LT CNL+PQDLA LEAS
Sbjct: 61  LTACNLEPQDLAKLEAS 77


>ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
            max]
          Length = 535

 Score =  710 bits (1833), Expect(2) = 0.0
 Identities = 352/476 (73%), Positives = 387/476 (81%), Gaps = 1/476 (0%)
 Frame = +1

Query: 664  LQATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVL 843
            L+ATCSFF+QPANFAPD +LS+SELAALDMC+KRA+FKPMTT ++++LK RCGGSWKL L
Sbjct: 74   LEATCSFFRQPANFAPDLDLSLSELAALDMCQKRAIFKPMTTEQRQDLKLRCGGSWKLAL 133

Query: 844  RFLLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIXX 1023
            R+L+AGEACCRREK QAIAGPGHSI VTSKG VYSFGSNSSGQLGHGT +EE RP PI  
Sbjct: 134  RYLMAGEACCRREKSQAIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTDEEWRPRPI-- 191

Query: 1024 XXXXXXXXXXXXXXRSLQGVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTK 1203
                          R+LQG+RIIQAAAGAGRTML+SD+G VYAFGKDSFGEAEYG QG+K
Sbjct: 192  --------------RTLQGIRIIQAAAGAGRTMLVSDSGQVYAFGKDSFGEAEYGVQGSK 237

Query: 1204 FVMTPHRLESLKNIFVVQAAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPL 1383
             V  P  +ESLKNIFVVQAAIGNFFTA+LSREGRVYTFSWG+D  LGH TD SD+EPHPL
Sbjct: 238  TVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDQSDVEPHPL 297

Query: 1384 LGPLENVPIVQIXXXXXXXXXXXXQPGGMSVYSVXXXXXXXXXXXSRTDERYPKLIEQFQ 1563
            LG LEN+P+VQI            QP GMSVYSV           SRTDE+YP+LIEQF 
Sbjct: 298  LGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFG 357

Query: 1564 TLNLQPXXXXXXXXXXXXXGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALAKIKAVH 1743
             LNLQP             GRDGRVCTWGWGRYGCLGHGNEECESVPKVVEAL+ +KAVH
Sbjct: 358  LLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSNVKAVH 417

Query: 1744 VATGDYTTFVVSEDGDVYSFGCGESSSLGHN-AGADGQENRHTNVLTPELVTSLKQVNER 1920
            VATGDYTTFVVS+DGDVYSFGCGES+SLGHN AG D Q NRH NVL+PELVTSLKQ+NER
Sbjct: 418  VATGDYTTFVVSDDGDVYSFGCGESASLGHNAAGNDEQGNRHANVLSPELVTSLKQINER 477

Query: 1921 FVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGLELAGQQSERGKPELVDID 2088
             VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL   Q+ERG PE V+ID
Sbjct: 478  VVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTERGNPERVEID 533



 Score =  119 bits (299), Expect(2) = 0.0
 Identities = 55/77 (71%), Positives = 61/77 (79%)
 Frame = +2

Query: 350 MDTTASGTPSIHYHNIVDQXXXXXXXXXXPTFQRQQRHCFGESTPGEFPLAANPSIVLHV 529
           MD T SGTP++ YHNI DQ          PTFQRQQRHCFG+STPGEFPL+ANPSIVLHV
Sbjct: 1   MDATTSGTPTVQYHNIPDQPITAIIATPLPTFQRQQRHCFGDSTPGEFPLSANPSIVLHV 60

Query: 530 LTGCNLDPQDLATLEAS 580
           LT CNL+PQDLA LEA+
Sbjct: 61  LTACNLEPQDLAKLEAT 77


>ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
            gi|355490917|gb|AES72120.1| RCC1 domain-containing
            protein [Medicago truncatula]
          Length = 535

 Score =  709 bits (1830), Expect(2) = 0.0
 Identities = 348/475 (73%), Positives = 385/475 (81%)
 Frame = +1

Query: 664  LQATCSFFKQPANFAPDYELSISELAALDMCRKRAVFKPMTTSEQEELKQRCGGSWKLVL 843
            L+ATCSFF+QPANFAPD+ LS++ELAA DMC KRA+FKPMTT E+++LKQRCGGSWKLVL
Sbjct: 75   LEATCSFFRQPANFAPDFALSLAELAAFDMCMKRAIFKPMTTEERQDLKQRCGGSWKLVL 134

Query: 844  RFLLAGEACCRREKFQAIAGPGHSIVVTSKGKVYSFGSNSSGQLGHGTLEEESRPHPIXX 1023
            R+LLAGEACCRREK QAIAGPGHSI VTSKG VYSFGSNSSGQLGHGT EEE RP PI  
Sbjct: 135  RYLLAGEACCRREKSQAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPI-- 192

Query: 1024 XXXXXXXXXXXXXXRSLQGVRIIQAAAGAGRTMLISDAGHVYAFGKDSFGEAEYGAQGTK 1203
                          R+LQG+RIIQAAAGAGRTMLI+D+G VYAFGKDSFGEAEYG QG+K
Sbjct: 193  --------------RTLQGIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYGGQGSK 238

Query: 1204 FVMTPHRLESLKNIFVVQAAIGNFFTAILSREGRVYTFSWGNDATLGHQTDPSDLEPHPL 1383
             V+ P  +ESLKNIFVVQAAIGNFFTA+LSREGRVYTFSWG+D  LGH TD +D+EPHPL
Sbjct: 239  TVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPL 298

Query: 1384 LGPLENVPIVQIXXXXXXXXXXXXQPGGMSVYSVXXXXXXXXXXXSRTDERYPKLIEQFQ 1563
            LG LE++P+VQI            QP GMSVYSV           +RTDE++P+LIEQFQ
Sbjct: 299  LGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQ 358

Query: 1564 TLNLQPXXXXXXXXXXXXXGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALAKIKAVH 1743
            TLNLQP             GRDGRVCTWGWGRYGCLGHGNEECE+ PKVV+AL  +KAVH
Sbjct: 359  TLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVH 418

Query: 1744 VATGDYTTFVVSEDGDVYSFGCGESSSLGHNAGADGQENRHTNVLTPELVTSLKQVNERF 1923
            VATGDYTTFVV+EDGDVYSFGCGES+SLGHNA  D + NRH NVL PELVTSLKQ+NER 
Sbjct: 419  VATGDYTTFVVAEDGDVYSFGCGESASLGHNAVIDAEGNRHANVLNPELVTSLKQINERV 478

Query: 1924 VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGLELAGQQSERGKPELVDID 2088
            VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL   Q+ER  PE VDID
Sbjct: 479  VQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVANQTERVNPEQVDID 533



 Score =  109 bits (273), Expect(2) = 0.0
 Identities = 54/78 (69%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
 Frame = +2

Query: 350 MDTTASGTPSIHYHNIVDQXXXXXXXXXX-PTFQRQQRHCFGESTPGEFPLAANPSIVLH 526
           MD T SGTP+I YHNI DQ           PTFQRQQR C G STPGEFPL+A+PSIVLH
Sbjct: 1   MDATTSGTPTIQYHNITDQTITAIVVATPLPTFQRQQRQCLGNSTPGEFPLSASPSIVLH 60

Query: 527 VLTGCNLDPQDLATLEAS 580
           VLT CNLDPQDLA LEA+
Sbjct: 61  VLTSCNLDPQDLAKLEAT 78