BLASTX nr result
ID: Coptis21_contig00008983
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00008983
(1150 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI30404.3| unnamed protein product [Vitis vinifera] 90 6e-31
emb|CAN60108.1| hypothetical protein VITISV_044328 [Vitis vinifera] 87 4e-30
ref|XP_002873018.1| glycoside hydrolase starch-binding domain-co... 83 2e-28
ref|XP_002322974.1| predicted protein [Populus trichocarpa] gi|2... 79 7e-28
ref|NP_974720.1| carbohydrate-binding domain-containing protein ... 77 4e-27
>emb|CBI30404.3| unnamed protein product [Vitis vinifera]
Length = 382
Score = 90.1 bits (222), Expect(2) = 6e-31
Identities = 62/171 (36%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Frame = +1
Query: 661 VLYKFVLKGTTQQVYWQPGPDRILQTWDTKNTILVLEDWENAENQKITEEPSKDIGLN-V 837
+ +KF+LKG T + WQPGPDRIL+TW T+NTI V+EDWE+AE QKITE P + V
Sbjct: 139 IQFKFILKGITGTILWQPGPDRILRTWATENTITVVEDWEDAELQKITEGPVSILNEEPV 198
Query: 838 TENDFYPKGETVVNTYV--------DTITGNTTAYVIEASKAEVVREKKDESLAKLKEGS 993
+D E V T ++ TTA+ E AE + + A++KE
Sbjct: 199 INSDTLIAAEDVTRTKYAHLSDINKESAITVTTAHPSEKPPAEAQNKLTNPGSAEIKENL 258
Query: 994 LVAENILKRNSIVETDKKLATIQDEDCWVAYVGEPVLVPGLTLLPNITTEE 1146
+ E PVLVPGLT L I TEE
Sbjct: 259 ITYEG-----------------------------PVLVPGLTPLSTIPTEE 280
Score = 71.6 bits (174), Expect(2) = 6e-31
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = +3
Query: 363 SLKTQANVDNSEALTDTTYESKTVRVRFQLQKECVFGEQFFLVGDDPIIGLWDPASAIPL 542
S + QA ++ +E S TV VR QLQK C +GEQF +VGDDP+ GLWDP+SA+PL
Sbjct: 60 SPEPQAELETAETKIQKKSRSNTVHVRLQLQKRCSYGEQFLIVGDDPMFGLWDPSSAVPL 119
>emb|CAN60108.1| hypothetical protein VITISV_044328 [Vitis vinifera]
Length = 430
Score = 87.4 bits (215), Expect(2) = 4e-30
Identities = 72/211 (34%), Positives = 93/211 (44%), Gaps = 49/211 (23%)
Frame = +1
Query: 661 VLYKFVLKGTTQQVYWQPGPDRILQTWDTKNTILVLEDWENAENQKITEEPSKDIGLN-V 837
+ +KF+LKG T + WQPGPDRIL+TW T+NTI V+EDWE+AE QKITE P + V
Sbjct: 115 IQFKFILKGJTGTILWQPGPDRILRTWATENTITVVEDWEDAELQKITEGPVSILNEEPV 174
Query: 838 TENDFYPKGETVVNTYVDTITGN--------TTAYVIE---------------------- 927
+D E V T ++ TTA+ E
Sbjct: 175 INSDTLIAAEDVTXTKXAHJSDXNKESAITVTTAHPSEKPPAEAQNKLTVADNIPKSQEK 234
Query: 928 --ASKAEVVREKKDESLAKLKE----------------GSLVAENILKRNSIVETDKKLA 1053
A AE + K+E LA E L+A N L N K
Sbjct: 235 LMAMVAENIIYPKEEPLANANEVLRTKTAXSPEATSEKDVLMAGNNLADNGRAXPIKNPG 294
Query: 1054 TIQDEDCWVAYVGEPVLVPGLTLLPNITTEE 1146
+ + ++ + Y G PVLVPGLT L I TEE
Sbjct: 295 SAEIKENLITYEG-PVLVPGLTPLSTIPTEE 324
Score = 71.6 bits (174), Expect(2) = 4e-30
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = +3
Query: 363 SLKTQANVDNSEALTDTTYESKTVRVRFQLQKECVFGEQFFLVGDDPIIGLWDPASAIPL 542
S + QA ++ +E S TV VR QLQK C +GEQF +VGDDP+ GLWDP+SA+PL
Sbjct: 36 SPEPQAELETAETKIQKKSRSNTVHVRLQLQKRCSYGEQFLIVGDDPMFGLWDPSSAVPL 95
>ref|XP_002873018.1| glycoside hydrolase starch-binding domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
gi|297318855|gb|EFH49277.1| glycoside hydrolase
starch-binding domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 387
Score = 82.8 bits (203), Expect(2) = 2e-28
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Frame = +1
Query: 661 VLYKFVLKGTTQQVYWQPGPDRILQTWDTKNTILVLEDWENAENQKITEEPSKDIGLNVT 840
V +KF+LK T ++ WQPGP+R L+TW+T TI + EDW+NA+ Q + EE N++
Sbjct: 146 VEFKFILKAQTGEILWQPGPNRALETWETNKTIRICEDWDNADLQMMIEEDLVPY-TNIS 204
Query: 841 ENDFYPKGETVVNTY--VDTITGNTTAYVIEASKAEVVREKKDESLAKLKEGSLVAENIL 1014
N + E +V T + YV + S + + E + G+L A +
Sbjct: 205 SNSEEEEDEVLVTTQQKASVVVVENAGYVSDESAENSSFDIQSEKTVEPSNGALTAREVT 264
Query: 1015 KRNSIVETDKKLATIQDEDCWVAYVGEPVLVPGLTLLPNITTEEV 1149
K E + PVLVPGL L ++ +E+V
Sbjct: 265 KEAMFTEEE-----------------SPVLVPGLIPLSDLDSEDV 292
Score = 70.9 bits (172), Expect(2) = 2e-28
Identities = 35/58 (60%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = +3
Query: 372 TQANVDNSEALTDTTYESKTVRVRFQLQKECVFGEQFFLVGDDPII-GLWDPASAIPL 542
+Q NV+ S D KTVRVRFQL+KECVFGE FF++GDDP+ GLWDP +A+PL
Sbjct: 73 SQVNVEAS----DIEAHRKTVRVRFQLRKECVFGEHFFILGDDPVFGGLWDPETALPL 126
>ref|XP_002322974.1| predicted protein [Populus trichocarpa] gi|222867604|gb|EEF04735.1|
predicted protein [Populus trichocarpa]
Length = 295
Score = 79.0 bits (193), Expect(2) = 7e-28
Identities = 32/50 (64%), Positives = 42/50 (84%)
Frame = +1
Query: 661 VLYKFVLKGTTQQVYWQPGPDRILQTWDTKNTILVLEDWENAENQKITEE 810
+ +KF+LKG ++++WQPGPDRIL TW+T NTI+V EDWE+A QKITEE
Sbjct: 154 IQFKFILKGIAEKIFWQPGPDRILPTWETSNTIVVWEDWEDAALQKITEE 203
Score = 72.4 bits (176), Expect(2) = 7e-28
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +3
Query: 390 NSEALTDTTYESKTVRVRFQLQKECVFGEQFFLVGDDPIIGLWDPASAIPL 542
N L+ + +SKTV V+FQL+KEC FGEQF +VGDDP++GLWDP S IPL
Sbjct: 84 NKTCLSLSADDSKTVHVKFQLRKECSFGEQFTIVGDDPLLGLWDPESGIPL 134
>ref|NP_974720.1| carbohydrate-binding domain-containing protein [Arabidopsis thaliana]
gi|6759449|emb|CAB69854.1| putative protein [Arabidopsis
thaliana] gi|332002935|gb|AED90318.1|
carbohydrate-binding domain-containing protein
[Arabidopsis thaliana]
Length = 385
Score = 77.0 bits (188), Expect(2) = 4e-27
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 3/166 (1%)
Frame = +1
Query: 661 VLYKFVLKGTTQQVYWQPGPDRILQTWDTKNTILVLEDWENAENQKITEE---PSKDIGL 831
V +K +LK T ++ WQPGP+R L+TW+T TI + EDW+NA+ Q + EE P +I
Sbjct: 144 VEFKLLLKAQTGEILWQPGPNRALETWETNKTIRICEDWDNADLQMMIEEDFVPYTNISS 203
Query: 832 NVTENDFYPKGETVVNTYVDTITGNTTAYVIEASKAEVVREKKDESLAKLKEGSLVAENI 1011
+E++ G N+ V + YV + S + E + G+L A +
Sbjct: 204 IGSEDEDEVLGSVQQNSSV--VAVENAGYVSDESAQNSSFSIQSEKTMEPSNGALTAREV 261
Query: 1012 LKRNSIVETDKKLATIQDEDCWVAYVGEPVLVPGLTLLPNITTEEV 1149
+K E + PVLVPGL L ++ E+V
Sbjct: 262 IKEAMFTEEE-----------------SPVLVPGLIPLSDLDNEQV 290
Score = 72.0 bits (175), Expect(2) = 4e-27
Identities = 35/58 (60%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +3
Query: 372 TQANVDNSEALTDTTYESKTVRVRFQLQKECVFGEQFFLVGDDPII-GLWDPASAIPL 542
+Q NV++ E +KTVRVRFQL+KECVFGE FF+VGDDP+ GLWDP +A+PL
Sbjct: 71 SQVNVEDEEIEAS----NKTVRVRFQLRKECVFGEHFFIVGDDPVFGGLWDPETALPL 124