BLASTX nr result

ID: Coptis21_contig00008980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008980
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002459014.1| hypothetical protein SORBIDRAFT_03g044480 [S...   294   2e-77
ref|NP_001150323.1| ubiquitin-conjugating enzyme E2-22 kDa [Zea ...   290   2e-76
ref|XP_002318760.1| predicted protein [Populus trichocarpa] gi|2...   288   2e-75
ref|XP_002322290.1| predicted protein [Populus trichocarpa] gi|1...   286   6e-75
ref|NP_001045259.1| Os01g0925800 [Oryza sativa Japonica Group] g...   284   2e-74

>ref|XP_002459014.1| hypothetical protein SORBIDRAFT_03g044480 [Sorghum bicolor]
           gi|241930989|gb|EES04134.1| hypothetical protein
           SORBIDRAFT_03g044480 [Sorghum bicolor]
          Length = 195

 Score =  294 bits (753), Expect = 2e-77
 Identities = 147/196 (75%), Positives = 155/196 (79%)
 Frame = -3

Query: 785 MVDYARVQKELVDCNRDKGLSGVSIDLHGSNDNLSHLSGKITGPISSPYEGGTFLIDIRL 606
           MVD +RVQKEL +CNRD+ +SGVSI LH    N+SHL+G I GP  SPYEGGTF+IDIRL
Sbjct: 1   MVDVSRVQKELTECNRDREVSGVSIALH-DGANISHLTGTIAGPADSPYEGGTFVIDIRL 59

Query: 605 PDGYPFEPPKMQFLTKVWHPNISSQNGAICLDILKDQWSPXXXXXXXXXXXXXXXXSPEP 426
           P GYPFEPPKMQF+TKVWHPNISSQNGAICLDILKDQWSP                SP P
Sbjct: 60  PGGYPFEPPKMQFVTKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSSPAP 119

Query: 425 DDPQDAVVAQQYLRDYPTFVGTARYWTETFAKRASMGTEEKVQKLVEMGFPEVLVRKTLD 246
           DDPQDAVVAQQYLRDYPTF  TARYWTE FAK AS G EEKVQKLVEMGFPE LVR TL 
Sbjct: 120 DDPQDAVVAQQYLRDYPTFAATARYWTEAFAKSASTGMEEKVQKLVEMGFPEDLVRSTLK 179

Query: 245 SVGGDENAALEKLCSG 198
           SV GDEN ALEKLCSG
Sbjct: 180 SVDGDENMALEKLCSG 195


>ref|NP_001150323.1| ubiquitin-conjugating enzyme E2-22 kDa [Zea mays]
           gi|195638356|gb|ACG38646.1| ubiquitin-conjugating enzyme
           E2-22 kDa [Zea mays] gi|413951438|gb|AFW84087.1|
           ubiquitin carrier protein [Zea mays]
          Length = 197

 Score =  290 bits (743), Expect = 2e-76
 Identities = 145/196 (73%), Positives = 153/196 (78%)
 Frame = -3

Query: 785 MVDYARVQKELVDCNRDKGLSGVSIDLHGSNDNLSHLSGKITGPISSPYEGGTFLIDIRL 606
           MVD +RVQKEL +CNRD+ +SGVSI LH    N+SHL+G I GP  SPYEGGTF+IDIRL
Sbjct: 1   MVDVSRVQKELTECNRDREVSGVSIALH-DGANISHLTGTIAGPADSPYEGGTFVIDIRL 59

Query: 605 PDGYPFEPPKMQFLTKVWHPNISSQNGAICLDILKDQWSPXXXXXXXXXXXXXXXXSPEP 426
           P GYPFEPPKMQF+TKVWHPNISSQNGAICLDILKDQWSP                SP P
Sbjct: 60  PGGYPFEPPKMQFITKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSSPAP 119

Query: 425 DDPQDAVVAQQYLRDYPTFVGTARYWTETFAKRASMGTEEKVQKLVEMGFPEVLVRKTLD 246
           DDPQDAVVAQQYLRDYPTF  TARYWTE FAK AS G EEKVQKLVEMGFPE  VR  L 
Sbjct: 120 DDPQDAVVAQQYLRDYPTFAATARYWTEAFAKSASTGMEEKVQKLVEMGFPEDQVRSALK 179

Query: 245 SVGGDENAALEKLCSG 198
           SV GDEN ALEKLCSG
Sbjct: 180 SVDGDENMALEKLCSG 195


>ref|XP_002318760.1| predicted protein [Populus trichocarpa] gi|222859433|gb|EEE96980.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  288 bits (736), Expect = 2e-75
 Identities = 141/196 (71%), Positives = 156/196 (79%)
 Frame = -3

Query: 785 MVDYARVQKELVDCNRDKGLSGVSIDLHGSNDNLSHLSGKITGPISSPYEGGTFLIDIRL 606
           M+D+ARVQKEL +C+RD   SG+ +     +DNL+ L+G I GPISSPYEGGTF IDI L
Sbjct: 1   MIDFARVQKELQECSRDMEASGIKVA--PKSDNLARLTGTIPGPISSPYEGGTFQIDITL 58

Query: 605 PDGYPFEPPKMQFLTKVWHPNISSQNGAICLDILKDQWSPXXXXXXXXXXXXXXXXSPEP 426
           PDGYPFEPPKMQF TKVWHPNISSQ+GAICLDILKDQWSP                +PEP
Sbjct: 59  PDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPEP 118

Query: 425 DDPQDAVVAQQYLRDYPTFVGTARYWTETFAKRASMGTEEKVQKLVEMGFPEVLVRKTLD 246
           DDPQDAVVAQQYLRD  TFVGTARYWTETFAK +S+G EEKVQKLVEMGFPE L R  L+
Sbjct: 119 DDPQDAVVAQQYLRDRQTFVGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEALARSALE 178

Query: 245 SVGGDENAALEKLCSG 198
           SVGGDEN+ALEKLCSG
Sbjct: 179 SVGGDENSALEKLCSG 194


>ref|XP_002322290.1| predicted protein [Populus trichocarpa] gi|118481915|gb|ABK92892.1|
           unknown [Populus trichocarpa]
           gi|222869286|gb|EEF06417.1| predicted protein [Populus
           trichocarpa]
          Length = 194

 Score =  286 bits (731), Expect = 6e-75
 Identities = 140/196 (71%), Positives = 154/196 (78%)
 Frame = -3

Query: 785 MVDYARVQKELVDCNRDKGLSGVSIDLHGSNDNLSHLSGKITGPISSPYEGGTFLIDIRL 606
           M+D+ARVQKEL +C+RD   SG+ +     +DNL  L+G I GPI +PYEGGTF IDI L
Sbjct: 1   MIDFARVQKELQECSRDMEASGIKVA--PKSDNLGRLTGTIPGPIGTPYEGGTFQIDITL 58

Query: 605 PDGYPFEPPKMQFLTKVWHPNISSQNGAICLDILKDQWSPXXXXXXXXXXXXXXXXSPEP 426
           PDGYPFEPPKMQF TKVWHPNISSQ+GAICLDILKDQWSP                +PEP
Sbjct: 59  PDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPEP 118

Query: 425 DDPQDAVVAQQYLRDYPTFVGTARYWTETFAKRASMGTEEKVQKLVEMGFPEVLVRKTLD 246
           DDPQDAVVAQQYLRDY TFVGTARYWTETFAK +S+G EEKVQKLVEMGFPE L R  L+
Sbjct: 119 DDPQDAVVAQQYLRDYQTFVGTARYWTETFAKTSSLGVEEKVQKLVEMGFPESLARGALE 178

Query: 245 SVGGDENAALEKLCSG 198
           SVGGDEN ALEKLCSG
Sbjct: 179 SVGGDENLALEKLCSG 194


>ref|NP_001045259.1| Os01g0925800 [Oryza sativa Japonica Group]
           gi|20160720|dbj|BAB89662.1| putative ubiquitin
           conjugating enzyme [Oryza sativa Japonica Group]
           gi|20805218|dbj|BAB92885.1| putative ubiquitin
           conjugating enzyme [Oryza sativa Japonica Group]
           gi|113534790|dbj|BAF07173.1| Os01g0925800 [Oryza sativa
           Japonica Group] gi|125528935|gb|EAY77049.1| hypothetical
           protein OsI_05005 [Oryza sativa Indica Group]
           gi|125573172|gb|EAZ14687.1| hypothetical protein
           OsJ_04611 [Oryza sativa Japonica Group]
           gi|215706954|dbj|BAG93414.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 195

 Score =  284 bits (727), Expect = 2e-74
 Identities = 140/196 (71%), Positives = 153/196 (78%)
 Frame = -3

Query: 785 MVDYARVQKELVDCNRDKGLSGVSIDLHGSNDNLSHLSGKITGPISSPYEGGTFLIDIRL 606
           MVD +RVQKEL +CNRD+ +SGVSI LH  +  +SHL+G I GP  +PYEGGTF+IDIRL
Sbjct: 1   MVDVSRVQKELTECNRDREVSGVSIALHDGS-TISHLTGTIAGPQGTPYEGGTFVIDIRL 59

Query: 605 PDGYPFEPPKMQFLTKVWHPNISSQNGAICLDILKDQWSPXXXXXXXXXXXXXXXXSPEP 426
           P GYPFEPPKMQF+TKVWHPNISSQNGAICLDILKDQWSP                +P P
Sbjct: 60  PGGYPFEPPKMQFITKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSAPAP 119

Query: 425 DDPQDAVVAQQYLRDYPTFVGTARYWTETFAKRASMGTEEKVQKLVEMGFPEVLVRKTLD 246
           DDPQDAVVAQQYLRDY TF  TARYWTE FAK +S G EEKVQKLVEMGFPE +VR  L 
Sbjct: 120 DDPQDAVVAQQYLRDYSTFSATARYWTEAFAKNSSTGMEEKVQKLVEMGFPEDMVRSVLK 179

Query: 245 SVGGDENAALEKLCSG 198
           SV GDEN ALEKLCSG
Sbjct: 180 SVNGDENMALEKLCSG 195


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