BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008977
         (1553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529480.1| PREDICTED: putative DNA repair protein RAD23...   462   e-128
ref|NP_001240038.1| uncharacterized protein LOC100819019 [Glycin...   462   e-127
ref|XP_003637291.1| RAD23 protein [Medicago truncatula] gi|35550...   460   e-127
ref|XP_002512770.1| uv excision repair protein rad23, putative [...   459   e-127
ref|XP_003543713.1| PREDICTED: putative DNA repair protein RAD23...   458   e-126

>ref|XP_003529480.1| PREDICTED: putative DNA repair protein RAD23-1-like isoform 1
            [Glycine max]
          Length = 363

 Score =  462 bits (1190), Expect = e-128
 Identities = 247/380 (65%), Positives = 273/380 (71%)
 Frame = -2

Query: 1450 MKLTVKTLKGSHFEIRVHSNDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLE 1271
            MKLTVKTLKGSHFEIRV  +DT+MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 1270 ENSVSEDGFLVVMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG 1091
            EN VSEDGFLVVML                                            + 
Sbjct: 61   ENKVSEDGFLVVMLSKSKTSGSAAASSVQPASNPATTVSMSNSTPPSDPPVQTQAANNST 120

Query: 1090 SDSATGTSEAPADTYGQAASNLVAGSNLEPIIQQLMDMGGGSWDKETVTRALRAAYNNPE 911
            S +   T+   ADTYG AASNLVAGSNLE  IQQ+MDMGGG+WD++TV+RALRAAYNNPE
Sbjct: 121  SSTDAPTTNVSADTYGLAASNLVAGSNLEQTIQQIMDMGGGNWDRDTVSRALRAAYNNPE 180

Query: 910  RAVDYLYSGIPEAAEVAVQVPSYPTSQQSVGPNXXXXXXXXXXXXXASGVPNSAPLNLFP 731
            RA+DYLYSGIPEAAEVAV VP          P                  PNS+PLN+FP
Sbjct: 181  RAIDYLYSGIPEAAEVAVPVPQTAGMSSGAVPVG----------------PNSSPLNMFP 224

Query: 730  QEAVNXXXXXXXXALDFLRNNHQFQTLRTMVQANPQILQPMLQELSKQNPYLLRLIQEHH 551
            QE ++         LDFLRNN QFQ LR+MVQ+NPQILQP+LQEL KQNP LLRLIQEHH
Sbjct: 225  QETISSTGAGLGS-LDFLRNNPQFQALRSMVQSNPQILQPVLQELGKQNPGLLRLIQEHH 283

Query: 550  AEFLRLVNEPVDGAEEDMFEQPEQDMPHAISVTPAEQEAIGRLEAMGFDRDLVIEAFLAC 371
             EFL+L+NEPV+G+E DMFEQPEQDMPHAI+VTPAEQEAIGRLEAMGFDR  VIEAFLAC
Sbjct: 284  GEFLQLINEPVEGSEGDMFEQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLAC 343

Query: 370  DRNEELAANYLLENGGDYED 311
            DR+E+LAANYLLEN GD+ED
Sbjct: 344  DRDEQLAANYLLENAGDFED 363


>ref|NP_001240038.1| uncharacterized protein LOC100819019 [Glycine max]
            gi|255647960|gb|ACU24437.1| unknown [Glycine max]
          Length = 363

 Score =  462 bits (1189), Expect = e-127
 Identities = 247/380 (65%), Positives = 273/380 (71%)
 Frame = -2

Query: 1450 MKLTVKTLKGSHFEIRVHSNDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLE 1271
            MKLTVKTLKGSHFEIRV  +DT+MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 1270 ENSVSEDGFLVVMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG 1091
            EN VSEDGFLVVML                                            + 
Sbjct: 61   ENKVSEDGFLVVMLSKSKTSGSAAASSVQPASNPPTTVSTSNSTPPSDPPVQTQAANNST 120

Query: 1090 SDSATGTSEAPADTYGQAASNLVAGSNLEPIIQQLMDMGGGSWDKETVTRALRAAYNNPE 911
            S +   T+   ADTYG AASNLVAGSNLE  IQQ+MDMGGG+WD++TV+RALRAAYNNPE
Sbjct: 121  SSTDAPTTNVSADTYGLAASNLVAGSNLEQTIQQIMDMGGGNWDRDTVSRALRAAYNNPE 180

Query: 910  RAVDYLYSGIPEAAEVAVQVPSYPTSQQSVGPNXXXXXXXXXXXXXASGVPNSAPLNLFP 731
            RA+DYLYSGIPEAAEVAV VP          P                  PNS+PLN+FP
Sbjct: 181  RAIDYLYSGIPEAAEVAVPVPQTAGISSGAVPVG----------------PNSSPLNMFP 224

Query: 730  QEAVNXXXXXXXXALDFLRNNHQFQTLRTMVQANPQILQPMLQELSKQNPYLLRLIQEHH 551
            QE ++         LDFLRNN QFQ LR+MVQ+NPQILQP+LQEL KQNP LLRLIQEHH
Sbjct: 225  QETISSTGAGLGS-LDFLRNNPQFQALRSMVQSNPQILQPVLQELGKQNPGLLRLIQEHH 283

Query: 550  AEFLRLVNEPVDGAEEDMFEQPEQDMPHAISVTPAEQEAIGRLEAMGFDRDLVIEAFLAC 371
             EFL+L+NEPVDG+E D+FEQPEQDMPHAI+VTPAEQEAIGRLEAMGFDR  VIEAFLAC
Sbjct: 284  GEFLQLINEPVDGSEGDIFEQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLAC 343

Query: 370  DRNEELAANYLLENGGDYED 311
            DR+E+LAANYLLEN GD+ED
Sbjct: 344  DRDEQLAANYLLENAGDFED 363


>ref|XP_003637291.1| RAD23 protein [Medicago truncatula] gi|355503226|gb|AES84429.1| RAD23
            protein [Medicago truncatula]
          Length = 366

 Score =  460 bits (1183), Expect = e-127
 Identities = 244/380 (64%), Positives = 272/380 (71%)
 Frame = -2

Query: 1450 MKLTVKTLKGSHFEIRVHSNDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLE 1271
            MKLTVKTLKGSHFEIRVH +D+IMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVHPSDSIMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 1270 ENSVSEDGFLVVMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG 1091
            +N VSEDGFLVVML                                              
Sbjct: 61   DNKVSEDGFLVVMLSKSKVLGSAGTSSTQTASNPPITVPTPDSTSVVQTQSANNN----A 116

Query: 1090 SDSATGTSEAPADTYGQAASNLVAGSNLEPIIQQLMDMGGGSWDKETVTRALRAAYNNPE 911
            S +    +    DTYGQAASNLVAGSNLE  IQQL+DMGGGSWD++TV RALRAA+NNPE
Sbjct: 117  SPAVLAPTNVTTDTYGQAASNLVAGSNLEQTIQQLIDMGGGSWDRDTVNRALRAAFNNPE 176

Query: 910  RAVDYLYSGIPEAAEVAVQVPSYPTSQQSVGPNXXXXXXXXXXXXXASGVPNSAPLNLFP 731
            RAVDYLYSGIPEAAEVAV    YP++    G                 GVPNS+PLN+FP
Sbjct: 177  RAVDYLYSGIPEAAEVAVPAAQYPSNPTETG---------GVTTGVVPGVPNSSPLNMFP 227

Query: 730  QEAVNXXXXXXXXALDFLRNNHQFQTLRTMVQANPQILQPMLQELSKQNPYLLRLIQEHH 551
            QE ++         LDFLRNN QFQ LRTMVQ+NPQILQP+LQEL KQNP LLRLI EHH
Sbjct: 228  QETISGAGAGAGS-LDFLRNNPQFQALRTMVQSNPQILQPVLQELGKQNPGLLRLIDEHH 286

Query: 550  AEFLRLVNEPVDGAEEDMFEQPEQDMPHAISVTPAEQEAIGRLEAMGFDRDLVIEAFLAC 371
            +EFL+L+NEP+DG E D F+Q EQDMPHA++VTPAEQEAIGRLEAMGFDR  VIEAFLAC
Sbjct: 287  SEFLQLINEPMDGTEGDNFDQAEQDMPHAVNVTPAEQEAIGRLEAMGFDRASVIEAFLAC 346

Query: 370  DRNEELAANYLLENGGDYED 311
            DR+E+LAANYLLEN GD+ED
Sbjct: 347  DRDEQLAANYLLENAGDFED 366


>ref|XP_002512770.1| uv excision repair protein rad23, putative [Ricinus communis]
            gi|223547781|gb|EEF49273.1| uv excision repair protein
            rad23, putative [Ricinus communis]
          Length = 359

 Score =  459 bits (1182), Expect = e-127
 Identities = 251/386 (65%), Positives = 274/386 (70%), Gaps = 6/386 (1%)
 Frame = -2

Query: 1450 MKLTVKTLKGSHFEIRVHSNDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLE 1271
            MKLTVKTLKGSHFEIRV  NDT+MAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA 60

Query: 1270 ENSVSEDGFLVVMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG 1091
            +N V+EDGFLVVML                                              
Sbjct: 61   DNKVTEDGFLVVMLSKSKTSGSSGTSSTQPAAATPPTTAP-------------------S 101

Query: 1090 SDSATGTSEAP---ADTYGQAASNLVAGSNLEPIIQQLMDMGGGSWDKETVTRALRAAYN 920
            S+S       P    DTYG+AASNLVAG NLE  IQQ+MDMGGG+WDKETVTRALRAAYN
Sbjct: 102  SNSTPAVEVQPPTQTDTYGEAASNLVAGDNLEQTIQQIMDMGGGTWDKETVTRALRAAYN 161

Query: 919  NPERAVDYLYSGIPEAAEVAVQVPSYPTSQQSVGPNXXXXXXXXXXXXXASGVPNSAPLN 740
            NPERAVDYLYSGIPE AEVAV V   P  Q +                  SGVPNS+PLN
Sbjct: 162  NPERAVDYLYSGIPETAEVAVPVAHLPAGQAT--------ETGAAPAAPLSGVPNSSPLN 213

Query: 739  LFPQEAVNXXXXXXXXAL---DFLRNNHQFQTLRTMVQANPQILQPMLQELSKQNPYLLR 569
            +FPQEA++         L   DFLRNN QFQTLR+MVQANPQILQPMLQEL KQNP LLR
Sbjct: 214  MFPQEALSAAGGGSAGGLGSLDFLRNNAQFQTLRSMVQANPQILQPMLQELGKQNPQLLR 273

Query: 568  LIQEHHAEFLRLVNEPVDGAEEDMFEQPEQDMPHAISVTPAEQEAIGRLEAMGFDRDLVI 389
            +IQEHHAEFL+L+NEP++G+E D+F+Q EQDMPHAI+VTPAEQ AI RL AMGFDR LVI
Sbjct: 274  MIQEHHAEFLQLLNEPLEGSEGDIFDQGEQDMPHAINVTPAEQAAIERLVAMGFDRALVI 333

Query: 388  EAFLACDRNEELAANYLLENGGDYED 311
            EAFLACDRNE LAANYLLENGGD+ED
Sbjct: 334  EAFLACDRNEVLAANYLLENGGDFED 359


>ref|XP_003543713.1| PREDICTED: putative DNA repair protein RAD23-1-like isoform 1
            [Glycine max]
          Length = 367

 Score =  458 bits (1179), Expect = e-126
 Identities = 247/379 (65%), Positives = 273/379 (72%)
 Frame = -2

Query: 1450 MKLTVKTLKGSHFEIRVHSNDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLE 1271
            MKLTVKTLKGSHFEIRV  +DTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTL 
Sbjct: 1    MKLTVKTLKGSHFEIRVQPSDTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLS 60

Query: 1270 ENSVSEDGFLVVMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG 1091
            +N VSEDGFLVVML                                              
Sbjct: 61   DNKVSEDGFLVVMLSKGKTLGSAGISSTQFASNPPTTVSTPNSTPLVQPQSANNN----A 116

Query: 1090 SDSATGTSEAPADTYGQAASNLVAGSNLEPIIQQLMDMGGGSWDKETVTRALRAAYNNPE 911
            S +   T+    +TYGQAASNLVAGSNLE  IQQLMDMGGGSWD++TVT ALRAAYNNPE
Sbjct: 117  SATDVTTTNVTTNTYGQAASNLVAGSNLEQTIQQLMDMGGGSWDRDTVTCALRAAYNNPE 176

Query: 910  RAVDYLYSGIPEAAEVAVQVPSYPTSQQSVGPNXXXXXXXXXXXXXASGVPNSAPLNLFP 731
            RAVDYLYSGIP AAE+AV   SYP SQ +                   GVPNS+PLN+FP
Sbjct: 177  RAVDYLYSGIPVAAEIAVPAASYPISQTT--------ETGGASVGAVPGVPNSSPLNMFP 228

Query: 730  QEAVNXXXXXXXXALDFLRNNHQFQTLRTMVQANPQILQPMLQELSKQNPYLLRLIQEHH 551
            QE ++         LDFLRNN QFQ LR+MVQ+NPQILQP+LQEL KQNP LL LIQEHH
Sbjct: 229  QETISGAGAEIGS-LDFLRNNPQFQALRSMVQSNPQILQPVLQELGKQNPSLLTLIQEHH 287

Query: 550  AEFLRLVNEPVDGAEEDMFEQPEQDMPHAISVTPAEQEAIGRLEAMGFDRDLVIEAFLAC 371
            AEFL+L+NEPV+G+E D+F+QPEQDMPHAI+VTPAEQEAIGRLEAMGFDR  VIEAFLAC
Sbjct: 288  AEFLQLINEPVEGSEGDIFDQPEQDMPHAINVTPAEQEAIGRLEAMGFDRASVIEAFLAC 347

Query: 370  DRNEELAANYLLENGGDYE 314
            D +E+LAANYLLEN GD+E
Sbjct: 348  DHDEQLAANYLLENAGDFE 366