BLASTX nr result

ID: Coptis21_contig00008969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008969
         (1844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517855.1| DNA binding protein, putative [Ricinus commu...   303   1e-79
emb|CBI21901.3| unnamed protein product [Vitis vinifera]              285   4e-79
ref|XP_002275230.1| PREDICTED: transcription activator GLK1-like...   293   1e-76
ref|NP_001241943.1| uncharacterized protein LOC100799248 [Glycin...   269   2e-69
gb|AFF60405.1| golden 2-like 1 transcription factor [Capsicum an...   267   8e-69

>ref|XP_002517855.1| DNA binding protein, putative [Ricinus communis]
            gi|223542837|gb|EEF44373.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 424

 Score =  303 bits (775), Expect = 1e-79
 Identities = 192/385 (49%), Positives = 213/385 (55%), Gaps = 16/385 (4%)
 Frame = -2

Query: 1312 VLPDLEMDSDMLAXXXXXXXXXXXF----NTSYSNEKVXXXXXXXXXXXXXXXXXXXXXX 1145
            VLPDLEMD ++LA                NT  SNEK+                      
Sbjct: 46   VLPDLEMDPEILAEFSVSSAGSGGEESDINTPVSNEKLEDSSRKDEEDKISGSGLDSSLS 105

Query: 1144 XXXXXXEIVSKRHESVRVNSSPKEXXXXXXXXXXXXXXXK------MKVDWTPELHRRFV 983
                   IVSKR ESV VN   KE                      +KVDWTP+LHRRFV
Sbjct: 106  TRGEE--IVSKRDESVVVNLVSKESDKGRKSSSTQAKNSNHQGKRKVKVDWTPDLHRRFV 163

Query: 982  QAVEQLGMDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQRRHI 803
            QAVEQLG+DKAVPSRILELMGIDCLTRHNIASHLQKYRSH+KHL AREAEAA+W+ RR +
Sbjct: 164  QAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAATWSHRRQV 223

Query: 802  YG--GVGGGSKRDLTSW---XXXXXXXXXXXXXXXXXXPLHVWGHPAAVEKPVMPMWPKH 638
            YG  G GGG KR++T W                     PLHVWGHP  +E+P++ MWPKH
Sbjct: 224  YGAPGGGGGGKREVTPWHAPTMGFPPITPMHHHHPHFRPLHVWGHP-PMEQPLVHMWPKH 282

Query: 637  IAHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLVPSALTPGTPCFPPIHAPTRFP 458
            +AHS                                  VPS L PGTPCFP   APTRF 
Sbjct: 283  LAHSPSPPPPPPRTWSPHPPPDPSYWHHHPHQQR----VPSGLIPGTPCFPQPVAPTRFA 338

Query: 457  TPAVPGIPPPLAMYKVDQGIGVSSAQSHSH-PPFDFHPSKESIDAAIGDVLSKXXXXXXX 281
            TP VPGIPP  AMYKVD GIGV + QS  + PPFDFHPSKESIDAAIGDV+SK       
Sbjct: 339  TPPVPGIPPH-AMYKVDPGIGVPTRQSGPNPPPFDFHPSKESIDAAIGDVISKPWLPLPL 397

Query: 280  XXXXXXLDCVMVELQRQGVPKIPPT 206
                  LD V+ ELQRQGV KIPPT
Sbjct: 398  GLKPPSLDGVIGELQRQGVAKIPPT 422


>emb|CBI21901.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  285 bits (729), Expect(2) = 4e-79
 Identities = 170/315 (53%), Positives = 186/315 (59%), Gaps = 9/315 (2%)
 Frame = -2

Query: 1123 IVSKRHESVRVNSSPKEXXXXXXXXXXXXXXXK---MKVDWTPELHRRFVQAVEQLGMDK 953
            IVSKR ESV  N+SPKE                   +KVDWTPELHRRFVQAVEQLG+DK
Sbjct: 59   IVSKRSESVATNASPKEVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVEQLGVDK 118

Query: 952  AVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQRRHIYG--GVGGGS 779
            AVPSRILE+MGIDCLTRHNIASHLQKYRSH+KHL AREAEAASW+Q+R +YG    GGG 
Sbjct: 119  AVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQKRQMYGVAAGGGGH 178

Query: 778  KRDLTSW-XXXXXXXXXXXXXXXXXXPLHVWGHPAAVEKPVMPMWPKHIAHSXXXXXXXX 602
            KR++  W                   PLHVWGHP  V++  M MWPKH+ HS        
Sbjct: 179  KREMGGWIPPTMGFPHITPMHHHPFRPLHVWGHP-TVDQSAMHMWPKHLPHSPSPPPPPP 237

Query: 601  XXXXXXXXXXXXXXXXXXXXXXXXQLVPSALTPGTPCFPPIHAPTRFPTPAVPGIPPPLA 422
                                      VP+ LT GTPCFP   A  RF TP V GIPP   
Sbjct: 238  PTWPPSATPPSPSPDPYWHPHHQR--VPNGLTQGTPCFPQPLAAARFATPPVTGIPPH-P 294

Query: 421  MYKVDQ---GIGVSSAQSHSHPPFDFHPSKESIDAAIGDVLSKXXXXXXXXXXXXXLDCV 251
            MYKVD    GIGV +  S   P FDFHPSKE+IDAAIGD LSK             LD V
Sbjct: 295  MYKVDHNHPGIGVPARHSGPFPLFDFHPSKETIDAAIGDALSKPWQPLPLGLKPPSLDGV 354

Query: 250  MVELQRQGVPKIPPT 206
            MVELQRQGVPKIPPT
Sbjct: 355  MVELQRQGVPKIPPT 369



 Score = 38.5 bits (88), Expect(2) = 4e-79
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = -3

Query: 1383 TSTGSLCLMILISMIYLLASVKETYCQTWRWIQTCWLSFHLVEARSQSLIR 1231
            TS    C  + IS I+  A   E YC+TWRW Q   L+F L   ++ +  R
Sbjct: 5    TSMKGTCSNVSISTIFSSAYTTERYCRTWRWTQKFSLNFPLAPEKNPTSSR 55


>ref|XP_002275230.1| PREDICTED: transcription activator GLK1-like [Vitis vinifera]
          Length = 432

 Score =  293 bits (749), Expect = 1e-76
 Identities = 184/381 (48%), Positives = 205/381 (53%), Gaps = 12/381 (3%)
 Frame = -2

Query: 1312 VLPDLEMDSDMLAXXXXXXXXXXXFNTSYSNEKVXXXXXXXXXXXXXXXXXXXXXXXXXX 1133
            +LPDLEMD ++LA            NTS + +KV                          
Sbjct: 54   ILPDLEMDPEILAEFSVSAGEESDVNTSVTEKKVEDNPKKEEEDKVSDTGSGSGLGYGSS 113

Query: 1132 XXE---IVSKRHESVRVNSSPKEXXXXXXXXXXXXXXXK---MKVDWTPELHRRFVQAVE 971
                  IVSKR ESV  N+SPKE                   +KVDWTPELHRRFVQAVE
Sbjct: 114  SSRGEEIVSKRSESVATNASPKEVEKGRKSSAQSKNPQGKRKVKVDWTPELHRRFVQAVE 173

Query: 970  QLGMDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQRRHIYG-- 797
            QLG+DKAVPSRILE+MGIDCLTRHNIASHLQKYRSH+KHL AREAEAASW+Q+R +YG  
Sbjct: 174  QLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQKRQMYGVA 233

Query: 796  GVGGGSKRDLTSW-XXXXXXXXXXXXXXXXXXPLHVWGHPAAVEKPVMPMWPKHIAHSXX 620
              GGG KR++  W                   PLHVWGHP  V++  M MWPKH+ HS  
Sbjct: 234  AGGGGHKREMGGWIPPTMGFPHITPMHHHPFRPLHVWGHP-TVDQSAMHMWPKHLPHSPS 292

Query: 619  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLVPSALTPGTPCFPPIHAPTRFPTPAVPG 440
                                            VP+ LT GTPCFP   A  RF TP V G
Sbjct: 293  PPPPPPPTWPPSATPPSPSPDPYWHPHHQR--VPNGLTQGTPCFPQPLAAARFATPPVTG 350

Query: 439  IPPPLAMYKVDQ---GIGVSSAQSHSHPPFDFHPSKESIDAAIGDVLSKXXXXXXXXXXX 269
            IPP   MYKVD    GIGV +  S   P FDFHPSKE+IDAAIGD LSK           
Sbjct: 351  IPPH-PMYKVDHNHPGIGVPARHSGPFPLFDFHPSKETIDAAIGDALSKPWQPLPLGLKP 409

Query: 268  XXLDCVMVELQRQGVPKIPPT 206
              LD VMVELQRQGVPKIPPT
Sbjct: 410  PSLDGVMVELQRQGVPKIPPT 430


>ref|NP_001241943.1| uncharacterized protein LOC100799248 [Glycine max]
            gi|255638900|gb|ACU19752.1| unknown [Glycine max]
          Length = 426

 Score =  269 bits (688), Expect = 2e-69
 Identities = 160/319 (50%), Positives = 186/319 (58%), Gaps = 11/319 (3%)
 Frame = -2

Query: 1123 IVSKRHESVRVNSSPKEXXXXXXXXXXXXXXXK-----------MKVDWTPELHRRFVQA 977
            IVS+R ESV VN +PK+                           +KVDWTPELHRRFVQA
Sbjct: 132  IVSERDESVVVNPAPKDGGKGRKSSSAQSKNNSSSNNNPQGKRKVKVDWTPELHRRFVQA 191

Query: 976  VEQLGMDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQRRHIYG 797
            VEQLG+DKAVPSRILE+MGIDCLTRHNIASHLQKYRSH+KHL AREAEAASW+QRR +  
Sbjct: 192  VEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRQL-- 249

Query: 796  GVGGGSKRDLTSWXXXXXXXXXXXXXXXXXXPLHVWGHPAAVEKPVMPMWPKHIAHSXXX 617
               GG KR+ + W                  PLHVWGHP ++++  M MWPKH+ +S   
Sbjct: 250  -CAGGGKREGSPWLAPTMGFPPMTPPMHHFRPLHVWGHP-SMDQSFMHMWPKHLPNS--- 304

Query: 616  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLVPSALTPGTPCFPPIHAPTRFPTPAVPGI 437
                                         QLVP+AL PGT CFP +  PTRF +P VPGI
Sbjct: 305  ----------PPLSWPPPAAPPQEPSFWHQLVPNALIPGTACFPQLLTPTRFGSPPVPGI 354

Query: 436  PPPLAMYKVDQGIGVSSAQSHSHPPFDFHPSKESIDAAIGDVLSKXXXXXXXXXXXXXLD 257
            PP  AMYK D  IG+        P FDF+PSKE IDAAIGDVLSK             LD
Sbjct: 355  PPH-AMYKADHDIGLPG------PLFDFYPSKECIDAAIGDVLSKPWLPLPIGLKAPALD 407

Query: 256  CVMVELQRQGVPKIPPTTS 200
             VM ELQRQG+P IPP+++
Sbjct: 408  SVMSELQRQGIPNIPPSSA 426


>gb|AFF60405.1| golden 2-like 1 transcription factor [Capsicum annuum]
          Length = 447

 Score =  267 bits (682), Expect = 8e-69
 Identities = 178/393 (45%), Positives = 203/393 (51%), Gaps = 24/393 (6%)
 Frame = -2

Query: 1312 VLPDLEMDSDMLAXXXXXXXXXXXFNTSYSNEKVXXXXXXXXXXXXXXXXXXXXXXXXXX 1133
            VLPDLEMD+++LA            N   S+ K                           
Sbjct: 55   VLPDLEMDTEILAEFSVSSGDESDVNNYSSSNKTTFISTATKKVERKDETERAASDVGSG 114

Query: 1132 XXEI--------VSKRHES---VRVNSSPKEXXXXXXXXXXXXXXXK-MKVDWTPELHRR 989
               +          K  ES   V+ N +PKE               + +KVDWTPELHRR
Sbjct: 115  LTSLNQGEEIVSTQKSEESTLQVKQNITPKESDKGKKSSKNNLPVKRKVKVDWTPELHRR 174

Query: 988  FVQAVEQLGMDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLRAREAEAASWNQRR 809
            FVQAVEQLG+DKAVPSRILE+MGIDCLTRHNIASHLQKYRSH+KHL AREAEAASW+QRR
Sbjct: 175  FVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRR 234

Query: 808  HIYGGV----GGGSKRDLTSW----XXXXXXXXXXXXXXXXXXPLHVWGHPAAVEKPVMP 653
             +Y G     GGG KRD+T W                      PLHVWGHP +V++  M 
Sbjct: 235  QLYCGAAVVGGGGGKRDMTPWPAPTIGFPPPPTMAAPMPHHFRPLHVWGHP-SVDQSYMH 293

Query: 652  MWPKHIAHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLVPSALTPGTPCFPPIHA 473
            MWPKH+A S                                + VP+ LTPGTP FP   A
Sbjct: 294  MWPKHLAPSPSPQHPSPAWAPPPHLHPPPPSDPSFWHPHHQR-VPNPLTPGTPYFPAPIA 352

Query: 472  PTRFP--TPAVPGIPPPL-AMYKVDQGIGVS-SAQSHSHPPFDFHPSKESIDAAIGDVLS 305
            PTR+P     VPGIPP   AMYKVD     +   Q    PP DFHPSKESIDAAIGDVLS
Sbjct: 353  PTRYPGGHHPVPGIPPAAHAMYKVDHVRSTAPPTQPLPKPPCDFHPSKESIDAAIGDVLS 412

Query: 304  KXXXXXXXXXXXXXLDCVMVELQRQGVPKIPPT 206
            K             +D V+ ELQRQGVPKIPPT
Sbjct: 413  KPWLPLPLGLKPPAVDSVLGELQRQGVPKIPPT 445


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