BLASTX nr result

ID: Coptis21_contig00008963 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008963
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634984.1| PREDICTED: uncharacterized protein LOC100852...   303   4e-80
ref|XP_002270450.2| PREDICTED: protein FAR1-RELATED SEQUENCE 3-l...   296   4e-78
emb|CAN81121.1| hypothetical protein VITISV_030391 [Vitis vinifera]   218   2e-54
ref|XP_002527271.1| conserved hypothetical protein [Ricinus comm...   206   8e-51
ref|XP_004150340.1| PREDICTED: protein FAR-RED IMPAIRED RESPONSE...   199   1e-48

>ref|XP_003634984.1| PREDICTED: uncharacterized protein LOC100852466 [Vitis vinifera]
          Length = 664

 Score =  303 bits (776), Expect = 4e-80
 Identities = 148/207 (71%), Positives = 174/207 (84%), Gaps = 1/207 (0%)
 Frame = -3

Query: 669  EHEDENGGMANEMELTAHDGSEDPCVGMQFESEQTAMVYYDAYAKRVGFIIRVGNCHRSG 490
            E +DEN     E  +   DG+ DP VGM+FESE+ AMVYYDAYAKRVGFIIRVGNCHRSG
Sbjct: 456  EDDDEND---REFIVNELDGTVDPYVGMEFESEEAAMVYYDAYAKRVGFIIRVGNCHRSG 512

Query: 489  RDNSIISRRFLCNKEGFRLANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWVISKLE 310
            RD S+ISRRFLCNKEGFR++N K KR E RKPR+ TREGC+AMIMVRK++SG+W+++KLE
Sbjct: 513  RDGSVISRRFLCNKEGFRVSNKKMKRLEVRKPREITREGCRAMIMVRKDKSGKWIVTKLE 572

Query: 309  KEHTHPLGLPASKGRRGSVQ-ARPQDEKDKKIRELSLELHRANLRLAECREQLDTILNDA 133
             EH HPLG+P  KGRRGSVQ  +  DEKDKKIRELS ELHRAN +LAECREQL+ +L D 
Sbjct: 573  TEHCHPLGIPTGKGRRGSVQLPKLMDEKDKKIRELSSELHRANQQLAECREQLEMVLKDI 632

Query: 132  ERHTDHLSKTVQDIVENVKEIEAEDQE 52
            ERHT+HL+K+VQDIVENVKE+EAED+E
Sbjct: 633  ERHTNHLTKSVQDIVENVKEVEAEDEE 659


>ref|XP_002270450.2| PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Vitis vinifera]
          Length = 245

 Score =  296 bits (758), Expect = 4e-78
 Identities = 145/203 (71%), Positives = 170/203 (83%), Gaps = 1/203 (0%)
 Frame = -3

Query: 669 EHEDENGGMANEMELTAHDGSEDPCVGMQFESEQTAMVYYDAYAKRVGFIIRVGNCHRSG 490
           E +DEN     E  +   DG+ DP VGM+FESE+ AMVYYDAYAKRVGFIIRVGNCHRSG
Sbjct: 32  EDDDEND---REFIVNELDGTVDPYVGMEFESEEAAMVYYDAYAKRVGFIIRVGNCHRSG 88

Query: 489 RDNSIISRRFLCNKEGFRLANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWVISKLE 310
           RD S+ISRRFLCNKEGFR++N K KR E RKPR+ TREGC+AMIMVRK++SG+W+++KLE
Sbjct: 89  RDGSVISRRFLCNKEGFRVSNKKMKRLEVRKPREITREGCRAMIMVRKDKSGKWIVTKLE 148

Query: 309 KEHTHPLGLPASKGRRGSVQ-ARPQDEKDKKIRELSLELHRANLRLAECREQLDTILNDA 133
            EH HPLG+P  KGRRGSVQ  +  DEKDKKIRELS ELHRAN +LAECREQL+ +L D 
Sbjct: 149 TEHCHPLGIPTGKGRRGSVQLPKLMDEKDKKIRELSSELHRANQQLAECREQLEMVLKDI 208

Query: 132 ERHTDHLSKTVQDIVENVKEIEA 64
           ERHT+HL+K+VQDIVENVKE+EA
Sbjct: 209 ERHTNHLTKSVQDIVENVKEVEA 231


>emb|CAN81121.1| hypothetical protein VITISV_030391 [Vitis vinifera]
          Length = 542

 Score =  218 bits (555), Expect = 2e-54
 Identities = 104/150 (69%), Positives = 122/150 (81%)
 Frame = -3

Query: 669 EHEDENGGMANEMELTAHDGSEDPCVGMQFESEQTAMVYYDAYAKRVGFIIRVGNCHRSG 490
           E +DEN     E  +   DG+ DP VGM+FESE+ AMVYYDAYAKRVGFIIRVGNCHRSG
Sbjct: 32  EDDDEND---REFIVNELDGTVDPYVGMEFESEEAAMVYYDAYAKRVGFIIRVGNCHRSG 88

Query: 489 RDNSIISRRFLCNKEGFRLANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWVISKLE 310
           RD S+ISRRFLCNKEGFR++N K KR E RKPR+ TREGC+AMIMVRK++SG+W+++KLE
Sbjct: 89  RDGSVISRRFLCNKEGFRVSNKKMKRLEVRKPREITREGCRAMIMVRKDKSGKWIVTKLE 148

Query: 309 KEHTHPLGLPASKGRRGSVQARPQDEKDKK 220
            EH HPLG+P  KGRRGSVQARPQ    +K
Sbjct: 149 TEHCHPLGIPTGKGRRGSVQARPQGRGRRK 178



 Score =  103 bits (258), Expect = 4e-20
 Identities = 49/62 (79%), Positives = 57/62 (91%)
 Frame = -3

Query: 237 DEKDKKIRELSLELHRANLRLAECREQLDTILNDAERHTDHLSKTVQDIVENVKEIEAED 58
           DEKDKKIRELS ELHRAN +LAECREQL+ +L D ERHT+HL+K+VQDIVENVKE+EAED
Sbjct: 289 DEKDKKIRELSSELHRANQQLAECREQLEMVLKDIERHTNHLTKSVQDIVENVKEVEAED 348

Query: 57  QE 52
           +E
Sbjct: 349 EE 350


>ref|XP_002527271.1| conserved hypothetical protein [Ricinus communis]
           gi|223533364|gb|EEF35115.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score =  206 bits (523), Expect = 8e-51
 Identities = 104/205 (50%), Positives = 144/205 (70%), Gaps = 2/205 (0%)
 Frame = -3

Query: 669 EHEDENGGMANEMELTAHDGSED--PCVGMQFESEQTAMVYYDAYAKRVGFIIRVGNCHR 496
           E  D+    +N  E+T  + S D  P VGM+FESE+ A V+YDAYA R+GFI+RV    R
Sbjct: 6   EDMDQTVDSSNGKEVTTAEESSDMEPYVGMEFESEEAAKVFYDAYATRLGFIMRVDAFRR 65

Query: 495 SGRDNSIISRRFLCNKEGFRLANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWVISK 316
           S RD  ++ RR +CNKEGFR    + +R+ENRKPR  TREGCKAMI+V+KE++G+WV+++
Sbjct: 66  SMRDGKVVWRRLVCNKEGFRKL--RPRRSENRKPRAITREGCKAMIVVKKEKTGKWVVTR 123

Query: 315 LEKEHTHPLGLPASKGRRGSVQARPQDEKDKKIRELSLELHRANLRLAECREQLDTILND 136
             KEH HPL    S GRR  + ++  DEKD KIREL+ EL R   R A  +EQL T+L D
Sbjct: 124 FVKEHNHPLVAIPSNGRRSVLLSQTPDEKDVKIRELTAELQRERKRSAAYQEQLYTVLRD 183

Query: 135 AERHTDHLSKTVQDIVENVKEIEAE 61
            E H++HLS+ ++D+V++V+EIE++
Sbjct: 184 MEEHSNHLSRNIEDVVQSVREIESK 208


>ref|XP_004150340.1| PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis
           sativus] gi|449507905|ref|XP_004163163.1| PREDICTED:
           protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis
           sativus]
          Length = 222

 Score =  199 bits (505), Expect = 1e-48
 Identities = 93/190 (48%), Positives = 139/190 (73%)
 Frame = -3

Query: 627 LTAHDGSEDPCVGMQFESEQTAMVYYDAYAKRVGFIIRVGNCHRSGRDNSIISRRFLCNK 448
           +T+++   +P VGM+FESE++  V+YDAYA R+GFI+RV    RS RD +++ RR +CNK
Sbjct: 29  ITSNNSDTEPFVGMEFESEESVKVFYDAYASRLGFIMRVDAFRRSMRDGAVVWRRLVCNK 88

Query: 447 EGFRLANNKTKRNENRKPRDTTREGCKAMIMVRKERSGRWVISKLEKEHTHPLGLPASKG 268
           EGFR    K KR+ENRKPR  TREGCKAM++V+KE++G+WV++K  K+H HPL +  +  
Sbjct: 89  EGFR--KFKPKRSENRKPRAVTREGCKAMVVVKKEKTGKWVVTKFVKDHNHPLIVTPASA 146

Query: 267 RRGSVQARPQDEKDKKIRELSLELHRANLRLAECREQLDTILNDAERHTDHLSKTVQDIV 88
           RR  + +  +DEKD KIREL+ EL +   R A  +EQL  IL D E H++HL++ + +I+
Sbjct: 147 RRNVLLSHTRDEKDAKIRELTAELQQERKRCAAYQEQLAMILGDMEEHSNHLARNIDNII 206

Query: 87  ENVKEIEAED 58
           ++V++IE+E+
Sbjct: 207 QSVRDIESEN 216


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