BLASTX nr result

ID: Coptis21_contig00008959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008959
         (1343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN40806.1| unknown [Picea sitchensis]                             223   9e-56
ref|XP_002336074.1| predicted protein [Populus trichocarpa] gi|2...   211   3e-52
ref|XP_002515961.1| conserved hypothetical protein [Ricinus comm...   204   3e-50
ref|XP_002314891.1| predicted protein [Populus trichocarpa] gi|2...   203   7e-50
gb|ABR17432.1| unknown [Picea sitchensis]                             203   7e-50

>gb|ACN40806.1| unknown [Picea sitchensis]
          Length = 332

 Score =  223 bits (568), Expect = 9e-56
 Identities = 131/327 (40%), Positives = 184/327 (56%), Gaps = 20/327 (6%)
 Frame = -1

Query: 1193 EISIPEEK-VFTGAVLPKTLI--------SIDTSRSSVEDLVVGITQNKDWLCATLAQHG 1041
            E  IPE+K +  G + PK +I        + D+    +  ++  I + KDW+   L + G
Sbjct: 8    EGKIPEQKQIENGRLFPKVVIPAAAGQYHNSDSQNEEMATVLEFIRKEKDWIQHELHESG 67

Query: 1040 AVLFRGF-NVESGGDFRRVVEAFGWDEMEYVGVAPRVKVDHRVYTANEAPLHLFIDFHHE 864
            A+LFRGF ++ +  DF   V+AFGW+E  Y G APR  V  RV+TANEAPL   I FHHE
Sbjct: 68   ALLFRGFKSMRTASDFNAFVDAFGWEEHTYQGAAPRNNVVGRVWTANEAPLDQDIFFHHE 127

Query: 863  MSLMKNQPSKIFFCCTIPSSEGGETSIARSWVLLREMEKRLPEFIEKLEGVGFVAELVFP 684
            M+L+K+ PSK+FF C I   EGG+T+I RS  +  EME + P  ++KLE  G +     P
Sbjct: 128  MALVKDFPSKLFFFCEIAPPEGGQTAIVRSDRVACEMESKFPSLVQKLEREGILTCTPLP 187

Query: 683  KEHTDQLVVGNTLASVLGTNDLXXXXXXXXXXXACSSIELMENGSTKVTFGPLEPIRTLQ 504
            KE      +G +  S L TND              S +  ME+GS  +  GPL   RT +
Sbjct: 188  KEENRDYFLGKSWQSHLQTND--PEEAQRRVEAGGSKLVWMEDGSANIIAGPLPATRTFE 245

Query: 503  G---KRLWTYNIRGDGQKP-------LLGDGSPMPPQVSETYMKILNEIGVDIRWQKGDV 354
            G   +++W   I     K        L GDGS +P  + E   +++N   V+++W+ GDV
Sbjct: 246  GYSDRKVWFNYIPAAVYKKAENYNILLCGDGSAIPKDIIEESARVMNNECVEVKWEAGDV 305

Query: 353  LLVDNLSTMHARRPGKPPRQILVSICK 273
            LL+DNL+ MHARRP KPPR++LVS+CK
Sbjct: 306  LLIDNLAVMHARRPSKPPRRVLVSMCK 332


>ref|XP_002336074.1| predicted protein [Populus trichocarpa]
            gi|224146078|ref|XP_002336285.1| predicted protein
            [Populus trichocarpa] gi|222833741|gb|EEE72218.1|
            predicted protein [Populus trichocarpa]
            gi|222869972|gb|EEF07103.1| predicted protein [Populus
            trichocarpa]
          Length = 321

 Score =  211 bits (537), Expect = 3e-52
 Identities = 108/308 (35%), Positives = 165/308 (53%), Gaps = 7/308 (2%)
 Frame = -1

Query: 1175 EKVFTGAVLPKTLISIDTSRSSVEDLVVGITQNKDWLCATLAQHGAVLFRGFNVESGGDF 996
            +KV  G  +P  L   + ++S  E L+  + QNKDW    L ++ AVL RGF+V++  DF
Sbjct: 16   QKVVDGETMPLVLQPPEPNKSDTESLISALKQNKDWFEQMLIKNSAVLLRGFDVKNAEDF 75

Query: 995  RRVVEAFGWDEMEYVGVAPRVKVDHRVYTANEAPLHLFIDFHHEMSLMKNQPSKIFFCCT 816
              ++EAFGWD++ Y+G APR +V  R++TANE PL  FI +HHEM L+K  P K+ F C 
Sbjct: 76   NDIIEAFGWDDIRYIGPAPRTQVYKRIWTANEGPLSEFIYYHHEMVLIKESPKKVMFFCE 135

Query: 815  IPSSEGGETSIARSWVLLREMEKRLPEFIEKLEGVGFVAELVFPKEHTDQLVVGNTLASV 636
            IP  EGG+T    S+ +   M +  PE +E++E  G       P +     + G      
Sbjct: 136  IPPPEGGQTPFVPSFRVTERMLEEFPEAVEEVEAKGLKYTFTAPSKDDTSSMRGRGWEHA 195

Query: 635  LGTNDLXXXXXXXXXXXACSSIELMENGSTKVTFGPLEPIRTL---QGKRLWTYNIRG-- 471
             GT+D                +E + NG  K   GP    +     +G+R+W   + G  
Sbjct: 196  FGTSDKAEAERRAKAIG--MDMEWLPNGGVKTIMGPPSLTKVFDGRKGRRMWFNTVVGMH 253

Query: 470  --DGQKPLLGDGSPMPPQVSETYMKILNEIGVDIRWQKGDVLLVDNLSTMHARRPGKPPR 297
              +    +L DG+ +P    +   +I+ E  +  +W+KGDVL +DN++ +H RRP  PPR
Sbjct: 254  GKESSSAMLADGTEIPENFVKRCGQIIEEESIQFKWEKGDVLFLDNMALLHGRRPSLPPR 313

Query: 296  QILVSICK 273
            ++LV+ICK
Sbjct: 314  KVLVAICK 321


>ref|XP_002515961.1| conserved hypothetical protein [Ricinus communis]
            gi|223544866|gb|EEF46381.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 322

 Score =  204 bits (520), Expect = 3e-50
 Identities = 119/327 (36%), Positives = 175/327 (53%), Gaps = 14/327 (4%)
 Frame = -1

Query: 1211 MDNLFVEISIPEEKVFTGAVLPKTLISIDTSRSSVEDLVVGITQNKDWLCATLAQHGAVL 1032
            M   F EI I  +K F   + P  L    ++ SS+ D    I   K +L + L + GA+L
Sbjct: 1    MAKQFKEIEISHQKHFNSLLFPSILSPNPSTLSSLTD---SIKSGKPYLTSLLHKSGAIL 57

Query: 1031 FRGFNVESGGDFRRVVEAFGWDEMEYVG-VAPRVKVDHRVYTANEAPLHLFIDFHHEMSL 855
            FRGF+V +  DF  VVEAFG+DE+ Y+G  APR  V  RV+TANE+P    I FHHEM+ 
Sbjct: 58   FRGFSVNTASDFNDVVEAFGFDELPYIGGAAPRTNVVGRVFTANESPPDQKIPFHHEMAQ 117

Query: 854  MKNQPSKIFFCCTIPSSEGGETSIARSWVLLREMEKRLPEFIEKLEGVGFVAELVFPKEH 675
            +   PSK+ F C +    GGET I  S ++  +M+++ PEF+E+L+  G +   V P+  
Sbjct: 118  VPEFPSKLLFFCEVEPGSGGETPIVLSHIVYEKMKEKYPEFVERLDKYGLIYNRVLPEVD 177

Query: 674  TDQLVVGNTLASVLGTNDLXXXXXXXXXXXACSSIELMENGSTKVTFGPLEPIR--TLQG 501
                 +G    S   TND                +E +E+G  K   GP+  I+   L+ 
Sbjct: 178  DPSSPIGRGWKSTFLTNDKTLAEERAAKLG--MKLEWLEDGGVKTIMGPIPAIKYDKLRN 235

Query: 500  KRLW----------TYNIRGDGQKPL-LGDGSPMPPQVSETYMKILNEIGVDIRWQKGDV 354
            +++W            ++R D  K +  GDG P+P  +    +KIL E  + I WQKGD+
Sbjct: 236  RKIWFNSMVAAYTGWKDMRNDPVKAVTFGDGKPLPGDIIYDCLKILEEESIAIPWQKGDI 295

Query: 353  LLVDNLSTMHARRPGKPPRQILVSICK 273
            LL+DN + +HAR+   PPR++L S+CK
Sbjct: 296  LLIDNWAVLHARKSFTPPRRVLASLCK 322


>ref|XP_002314891.1| predicted protein [Populus trichocarpa] gi|222863931|gb|EEF01062.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  203 bits (517), Expect = 7e-50
 Identities = 105/308 (34%), Positives = 162/308 (52%), Gaps = 7/308 (2%)
 Frame = -1

Query: 1175 EKVFTGAVLPKTLISIDTSRSSVEDLVVGITQNKDWLCATLAQHGAVLFRGFNVESGGDF 996
            +KV  G  +P  L   + ++S  E L+  + QNKDW    L ++ AVL RGF+V++  DF
Sbjct: 16   QKVVDGETMPLVLQPPEPNKSDTESLISALKQNKDWFEQMLIKNSAVLLRGFDVKNAEDF 75

Query: 995  RRVVEAFGWDEMEYVGVAPRVKVDHRVYTANEAPLHLFIDFHHEMSLMKNQPSKIFFCCT 816
              ++EAFGWD++ Y+G APR +V  R++TANE PL  FI +HHEM L+K  P K+   C 
Sbjct: 76   NDIIEAFGWDDIRYIGPAPRTQVYKRIWTANEGPLSEFIYYHHEMVLIKESPKKVVLFCE 135

Query: 815  IPSSEGGETSIARSWVLLREMEKRLPEFIEKLEGVGFVAELVFPKEHTDQLVVGNTLASV 636
            IP  EGG+T    S+ +   M +  PE +E++E  G         +     + G      
Sbjct: 136  IPPPEGGQTPFVPSFRVTERMLEEFPEAVEEVEAKGLKYTFTALSKDDTSSMRGRGWEDA 195

Query: 635  LGTNDLXXXXXXXXXXXACSSIELMENGSTKVTFGPLEPIRTL---QGKRLWTYNIRG-- 471
             GT+D                +E + NG  K   GP    +     +G+R+W   + G  
Sbjct: 196  FGTSDKAEAERRAKALG--MDMEWLPNGGVKTILGPRSLTKVFDGRKGRRMWFNTVVGMH 253

Query: 470  --DGQKPLLGDGSPMPPQVSETYMKILNEIGVDIRWQKGDVLLVDNLSTMHARRPGKPPR 297
              +    +L DG+ +P    +   +I+ E  +  +W+KGDVL +DN++ +H RRP  PPR
Sbjct: 254  GKESSSAMLADGTEIPENFVKRCGQIIEEESIQFKWEKGDVLFLDNMALLHGRRPSLPPR 313

Query: 296  QILVSICK 273
            ++LV+ CK
Sbjct: 314  KVLVATCK 321


>gb|ABR17432.1| unknown [Picea sitchensis]
          Length = 319

 Score =  203 bits (517), Expect = 7e-50
 Identities = 113/300 (37%), Positives = 163/300 (54%), Gaps = 4/300 (1%)
 Frame = -1

Query: 1160 GAVLPKTLISIDTSRSSVEDLVVGITQNKDWLCATLAQHGAVLFRGFNVESGGDFRRVVE 981
            G++ P  L+  D +  S+   +  I  N+DW+   L + G +LFRGF + S  DF   VE
Sbjct: 21   GSLFPMVLLPPDEN-PSIGSFLNAIHHNRDWIDNQLKRVGVLLFRGFPLRSASDFNAAVE 79

Query: 980  AFGWDEMEYVGVAPRVKVDHRVYTANEAPLHLFIDFHHEMSLMKNQPSKIFFCCTIPSSE 801
            AFGW+E  Y+G+A R +++ RVYTANEAPL   I FHHEM++    P+K+ F C I   E
Sbjct: 80   AFGWEEHPYLGLASRTRIEGRVYTANEAPLDQPIKFHHEMAMFDEFPTKLIFFCEIAPPE 139

Query: 800  GGETSIARSWVLLREMEKRLPEFIEKLEGVGFVAELVFPKEHTDQLVVGNTLASVLGTND 621
            GG+T+I  S  + + ME+R PE ++KLE  G    +  P+E   Q  +    +     N 
Sbjct: 140  GGQTAIVLSHKITQRMEQRYPELVKKLEKEGVTYPVSVPQEDDPQSFIKGWQSRYETDNK 199

Query: 620  LXXXXXXXXXXXACSSIELMENGSTKVTFGPLEPIRTLQG---KRLWTYNIRGDGQ-KPL 453
                          S I   ++G      GP+  IRT+ G   KR   +N    G+  P+
Sbjct: 200  QEAERRLANSGFPVSKITWADDGRMSFEMGPIVSIRTVDGDADKRKAWFNPSALGKTTPM 259

Query: 452  LGDGSPMPPQVSETYMKILNEIGVDIRWQKGDVLLVDNLSTMHARRPGKPPRQILVSICK 273
            LGDG   P    E++++I+ E  VDI W+ GDVL++DN    HARRP  PPR++L + CK
Sbjct: 260  LGDGPLFPEDAIESFIQIIEEECVDITWEVGDVLVLDNRFVQHARRPSTPPRRVLAAFCK 319


Top