BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008956
         (1114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39461.3| unnamed protein product [Vitis vinifera]              300   3e-79
ref|XP_002269673.1| PREDICTED: pentatricopeptide repeat-containi...   300   3e-79
ref|XP_002526313.1| conserved hypothetical protein [Ricinus comm...   298   1e-78
ref|XP_002515828.1| conserved hypothetical protein [Ricinus comm...   295   1e-77
ref|XP_002309089.1| predicted protein [Populus trichocarpa] gi|2...   287   4e-75

>emb|CBI39461.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  300 bits (769), Expect = 3e-79
 Identities = 145/202 (71%), Positives = 167/202 (82%)
 Frame = -2

Query: 993 ESKRDTSDSLKEPPGRNVSKKDKIKFLVDTLLGLKESKEAVYGALDAWVAWEKTFPIASL 814
           +S +D +   K   G NVS+KDKI FLV TLL LK+SKEAVYGALDAWVAWE+ FPIASL
Sbjct: 61  DSGKDAASVHKHQIGENVSRKDKINFLVTTLLDLKDSKEAVYGALDAWVAWEQNFPIASL 120

Query: 813 RIAMGTLEKEQEWHRVIQVIKWILSKGQGNTMGMYRQLINALDMDHRTEEAHNFWMKKIG 634
           +  + TLEKEQ+WHRVIQV+KW+LSKGQG TMG Y QLI ALDMDHR EEAH FW+KKIG
Sbjct: 121 KRVLITLEKEQQWHRVIQVVKWMLSKGQGTTMGTYGQLIRALDMDHRAEEAHEFWVKKIG 180

Query: 633 NDLHSVPWTICTLMISIYYRNNMMERLVKLFKGLEAFDRKPPEKSVVQKVANAYEMLGLL 454
            DLHSVPW +C  MIS+YYRNNM+E LVKLFKGLEAFDRKP +K VV+KVA+AYEMLGLL
Sbjct: 181 TDLHSVPWHLCHRMISVYYRNNMLENLVKLFKGLEAFDRKPQDKLVVKKVADAYEMLGLL 240

Query: 453 EEKNRVLEKFNDLFTDTWRGHP 388
           EEK R+ EK++ LFT+T  G P
Sbjct: 241 EEKERIFEKYDYLFTETVAGKP 262


>ref|XP_002269673.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18975,
           chloroplastic-like isoform 1 [Vitis vinifera]
          Length = 300

 Score =  300 bits (769), Expect = 3e-79
 Identities = 145/202 (71%), Positives = 167/202 (82%)
 Frame = -2

Query: 993 ESKRDTSDSLKEPPGRNVSKKDKIKFLVDTLLGLKESKEAVYGALDAWVAWEKTFPIASL 814
           +S +D +   K   G NVS+KDKI FLV TLL LK+SKEAVYGALDAWVAWE+ FPIASL
Sbjct: 65  DSGKDAASVHKHQIGENVSRKDKINFLVTTLLDLKDSKEAVYGALDAWVAWEQNFPIASL 124

Query: 813 RIAMGTLEKEQEWHRVIQVIKWILSKGQGNTMGMYRQLINALDMDHRTEEAHNFWMKKIG 634
           +  + TLEKEQ+WHRVIQV+KW+LSKGQG TMG Y QLI ALDMDHR EEAH FW+KKIG
Sbjct: 125 KRVLITLEKEQQWHRVIQVVKWMLSKGQGTTMGTYGQLIRALDMDHRAEEAHEFWVKKIG 184

Query: 633 NDLHSVPWTICTLMISIYYRNNMMERLVKLFKGLEAFDRKPPEKSVVQKVANAYEMLGLL 454
            DLHSVPW +C  MIS+YYRNNM+E LVKLFKGLEAFDRKP +K VV+KVA+AYEMLGLL
Sbjct: 185 TDLHSVPWHLCHRMISVYYRNNMLENLVKLFKGLEAFDRKPQDKLVVKKVADAYEMLGLL 244

Query: 453 EEKNRVLEKFNDLFTDTWRGHP 388
           EEK R+ EK++ LFT+T  G P
Sbjct: 245 EEKERIFEKYDYLFTETVAGKP 266


>ref|XP_002526313.1| conserved hypothetical protein [Ricinus communis]
            gi|223534394|gb|EEF36102.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 300

 Score =  298 bits (764), Expect = 1e-78
 Identities = 145/214 (67%), Positives = 170/214 (79%), Gaps = 2/214 (0%)
 Frame = -2

Query: 1023 PEGQ--YVDDLMESKRDTSDSLKEPPGRNVSKKDKIKFLVDTLLGLKESKEAVYGALDAW 850
            PE Q  Y      S +      K   G+NVS+K+KI FL+ TLL LK+SKEAVYGALDAW
Sbjct: 48   PEDQDDYKTTCHNSNQSAGGVQKNQIGKNVSRKEKIDFLLKTLLDLKDSKEAVYGALDAW 107

Query: 849  VAWEKTFPIASLRIAMGTLEKEQEWHRVIQVIKWILSKGQGNTMGMYRQLINALDMDHRT 670
            VAWE  FPIASL+  +  LEKEQ+WH+V+QVIKW+LSKGQGNTMG Y QLI ALDMDHR 
Sbjct: 108  VAWEHNFPIASLKRVLILLEKEQQWHKVVQVIKWMLSKGQGNTMGTYGQLIRALDMDHRA 167

Query: 669  EEAHNFWMKKIGNDLHSVPWTICTLMISIYYRNNMMERLVKLFKGLEAFDRKPPEKSVVQ 490
             EAH FW+KKIG DLHSVPW +C  MIS+YYRNNM+E LVKLFKGLEAFDRKPP+KS++Q
Sbjct: 168  NEAHMFWLKKIGLDLHSVPWQLCHRMISVYYRNNMLESLVKLFKGLEAFDRKPPDKSILQ 227

Query: 489  KVANAYEMLGLLEEKNRVLEKFNDLFTDTWRGHP 388
            KVA+AYEMLG+LEEK RVL+K+ DLF +T +G P
Sbjct: 228  KVADAYEMLGMLEEKERVLQKYKDLFKETEKGRP 261


>ref|XP_002515828.1| conserved hypothetical protein [Ricinus communis]
            gi|223545057|gb|EEF46570.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 317

 Score =  295 bits (755), Expect = 1e-77
 Identities = 144/214 (67%), Positives = 168/214 (78%), Gaps = 2/214 (0%)
 Frame = -2

Query: 1023 PEGQ--YVDDLMESKRDTSDSLKEPPGRNVSKKDKIKFLVDTLLGLKESKEAVYGALDAW 850
            PE Q  Y      S +      K   G+NVS+K+KI FL+ TLL LK+SKEAVYGA+DAW
Sbjct: 16   PEDQDDYKTTCHNSNQSAGGVQKNQIGKNVSRKEKIDFLLKTLLDLKDSKEAVYGAVDAW 75

Query: 849  VAWEKTFPIASLRIAMGTLEKEQEWHRVIQVIKWILSKGQGNTMGMYRQLINALDMDHRT 670
            VAWE  FPIASL+  +  LEKEQ+WHRV+QVIKWI+SKGQGNTMG Y QLI ALDMDHR 
Sbjct: 76   VAWEHNFPIASLKRVLILLEKEQQWHRVVQVIKWIISKGQGNTMGTYGQLIRALDMDHRA 135

Query: 669  EEAHNFWMKKIGNDLHSVPWTICTLMISIYYRNNMMERLVKLFKGLEAFDRKPPEKSVVQ 490
             EAH FW+KKIG DLHSVPW +C  MIS+YYRNNM+E LVKL KGLEAFD KPP+KS+VQ
Sbjct: 136  NEAHMFWLKKIGLDLHSVPWQLCHRMISVYYRNNMLESLVKLSKGLEAFDHKPPDKSIVQ 195

Query: 489  KVANAYEMLGLLEEKNRVLEKFNDLFTDTWRGHP 388
            KVA+AYEMLG+LEEK RVL+K+ DLF +T +G P
Sbjct: 196  KVADAYEMLGMLEEKERVLQKYKDLFKETEKGRP 229


>ref|XP_002309089.1| predicted protein [Populus trichocarpa] gi|222855065|gb|EEE92612.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  287 bits (734), Expect = 4e-75
 Identities = 138/202 (68%), Positives = 161/202 (79%), Gaps = 16/202 (7%)
 Frame = -2

Query: 951 GRNVSKKDKIKFLVDTL----------------LGLKESKEAVYGALDAWVAWEKTFPIA 820
           G NVSKKDKIKFL+ TL                L L +SK+AVYGALDAWVAWE+ FPIA
Sbjct: 40  GDNVSKKDKIKFLITTLVLYQLLYDKTILHMQLLDLNDSKDAVYGALDAWVAWEQKFPIA 99

Query: 819 SLRIAMGTLEKEQEWHRVIQVIKWILSKGQGNTMGMYRQLINALDMDHRTEEAHNFWMKK 640
           S++  +  LEKEQ+WHR++QVIKW+LSKGQG TM  Y QLI ALDMDHR +EAH FW+KK
Sbjct: 100 SIKQVLIALEKEQQWHRIVQVIKWMLSKGQGTTMATYAQLIRALDMDHRAKEAHEFWLKK 159

Query: 639 IGNDLHSVPWTICTLMISIYYRNNMMERLVKLFKGLEAFDRKPPEKSVVQKVANAYEMLG 460
           IG DLHSVPW +C  MI+IYYRNNM+E L+KLFKGLEAFDRKPPEKS+VQKVA+AYEMLG
Sbjct: 160 IGRDLHSVPWKLCNSMITIYYRNNMLENLIKLFKGLEAFDRKPPEKSIVQKVADAYEMLG 219

Query: 459 LLEEKNRVLEKFNDLFTDTWRG 394
           LLEEK R+LEK+N LF +T +G
Sbjct: 220 LLEEKGRLLEKYNHLFIETGKG 241