BLASTX nr result

ID: Coptis21_contig00008953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008953
         (1585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263125.1| PREDICTED: biotin synthase [Vitis vinifera] ...   591   e-166
ref|XP_002327854.1| predicted protein [Populus trichocarpa] gi|2...   589   e-166
ref|XP_002310445.1| predicted protein [Populus trichocarpa] gi|2...   587   e-165
ref|XP_002529753.1| biotin synthase, putative [Ricinus communis]...   584   e-164
ref|XP_004140874.1| PREDICTED: biotin synthase-like [Cucumis sat...   584   e-164

>ref|XP_002263125.1| PREDICTED: biotin synthase [Vitis vinifera]
            gi|297743757|emb|CBI36640.3| unnamed protein product
            [Vitis vinifera]
          Length = 381

 Score =  591 bits (1523), Expect = e-166
 Identities = 289/348 (83%), Positives = 313/348 (89%)
 Frame = +2

Query: 182  VQAERTIRDGPRNDWSTDEIKSIYNSPLLDLLFHGAQVHRYAHNFREVQQCTLLSVKTGG 361
            V+AER IRDGPRNDW+  EIKSIY+SPLLDLLFHGAQVHR+AHNFREVQQCTLLSVKTGG
Sbjct: 34   VEAERAIRDGPRNDWTRPEIKSIYDSPLLDLLFHGAQVHRHAHNFREVQQCTLLSVKTGG 93

Query: 362  CSEDCSYCPQSSRYDTGLKAQKLMNKDVVLEAAQKAKDAGSTRFCMGAAWRDTVGRKTNF 541
            CSEDCSYCPQSSRY TG+KAQ+LMNKD VL+AAQKAK+AGSTRFCMGAAWRDTVGRKTNF
Sbjct: 94   CSEDCSYCPQSSRYSTGVKAQRLMNKDAVLQAAQKAKEAGSTRFCMGAAWRDTVGRKTNF 153

Query: 542  NQILDYVKEIREMGMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSREYYPNVITTRSY 721
            NQIL+YVKEIR+MGMEVCCTLGMLEKQQA+ELKKAGLTAYNHNLDTSREYYPN+I TRSY
Sbjct: 154  NQILEYVKEIRDMGMEVCCTLGMLEKQQAIELKKAGLTAYNHNLDTSREYYPNIIRTRSY 213

Query: 722  DERLETLAFVREAGISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXXESVPINALVPVKGT 901
            DERLETL  VREAGI+VCSGGIIGLGEAE+DRVG            ESVPINAL+ VKGT
Sbjct: 214  DERLETLQLVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGT 273

Query: 902  PLENQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFSGEKL 1081
            PLE+QKPVEIWEM+RMIATARIVMPKAMVRLSAGRVRFS+ EQALCFLAGANSIF+G+KL
Sbjct: 274  PLEDQKPVEIWEMVRMIATARIVMPKAMVRLSAGRVRFSVPEQALCFLAGANSIFTGDKL 333

Query: 1082 LTTPNNDFDADQMMFKVLGLTPKAPKFSEETKSAFEGERCKEAVSA*G 1225
            LTTPNNDFDADQ MFK+LGL PKAP F E+     E E C++AVS  G
Sbjct: 334  LTTPNNDFDADQQMFKLLGLIPKAPSFDEDVAKTSEAENCEQAVSGSG 381


>ref|XP_002327854.1| predicted protein [Populus trichocarpa] gi|222837263|gb|EEE75642.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  589 bits (1518), Expect = e-166
 Identities = 289/360 (80%), Positives = 319/360 (88%), Gaps = 12/360 (3%)
 Frame = +2

Query: 182  VQAERTIRDGPRNDWSTDEIKSIYNSPLLDLLFHGAQVHRYAHNFREVQQCTLLSVKTGG 361
            +QAE+TI+DGPRNDW+ +EIK +Y+SPLLDLLFHGAQVHRYAHNFREVQQCTLLS+KTGG
Sbjct: 32   IQAEKTIKDGPRNDWTREEIKDVYDSPLLDLLFHGAQVHRYAHNFREVQQCTLLSIKTGG 91

Query: 362  CSEDCSYCPQSSRYDTGLKAQKLMNKDVVLEAAQKAKDAGSTRFCMGAAWRDTVGRKTNF 541
            CSEDCSYCPQSSRYDTG+KAQ+LM K+ V+EAA++AK+AGSTRFCMGAAWRDT+GRKTNF
Sbjct: 92   CSEDCSYCPQSSRYDTGVKAQRLMTKETVMEAAKRAKEAGSTRFCMGAAWRDTIGRKTNF 151

Query: 542  NQILDYVKEIREMGMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSREYYPNVITTRSY 721
            NQILDYVK+IR+MGMEVCCTLGMLEKQQA+ELKKAGLTAYNHNLDTSREYYPN+ITTRSY
Sbjct: 152  NQILDYVKDIRDMGMEVCCTLGMLEKQQAVELKKAGLTAYNHNLDTSREYYPNIITTRSY 211

Query: 722  DERLETLAFVREAGISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXXESVPINALVPVKGT 901
            DERLETL  VREAGI+VCSGGIIGLGEAE+DRVG            ESVPINALV VKGT
Sbjct: 212  DERLETLQHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALVSVKGT 271

Query: 902  PLENQK------------PVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMSEQALCFL 1045
            PL+ QK            PVEIWEMIRMI TARIVMPKAMVRLSAGRVRFSMSEQALCFL
Sbjct: 272  PLQEQKVLLIPVSYKFSMPVEIWEMIRMIGTARIVMPKAMVRLSAGRVRFSMSEQALCFL 331

Query: 1046 AGANSIFSGEKLLTTPNNDFDADQMMFKVLGLTPKAPKFSEETKSAFEGERCKEAVSA*G 1225
            AGANSIF+GEKLLTTPNND+DADQ+MFKVLGL PKAP FS E + A E E+C+EAVS+ G
Sbjct: 332  AGANSIFTGEKLLTTPNNDYDADQLMFKVLGLIPKAPSFSGEEEKACEAEQCQEAVSSSG 391


>ref|XP_002310445.1| predicted protein [Populus trichocarpa] gi|222853348|gb|EEE90895.1|
            predicted protein [Populus trichocarpa]
          Length = 382

 Score =  587 bits (1512), Expect = e-165
 Identities = 288/348 (82%), Positives = 313/348 (89%), Gaps = 2/348 (0%)
 Frame = +2

Query: 182  VQAERTIRDGPRNDWSTDEIKSIYNSPLLDLLFHGAQVHRYAHNFREVQQCTLLSVKTGG 361
            +QAE+TI+DGPRNDW+  EIK +Y+SPLLDLLFHGAQVHRYAHNFREVQQCTLLS+KTGG
Sbjct: 32   IQAEKTIKDGPRNDWTRQEIKEVYDSPLLDLLFHGAQVHRYAHNFREVQQCTLLSIKTGG 91

Query: 362  CSEDCSYCPQSSRYDTGLKAQKLMNKDVVLEAAQKAKDAGSTRFCMGAAWRDTVGRKTNF 541
            CSEDCSYCPQSSRY+TGLK Q+LM K+ V+EAA++AK+AGSTRFCMGAAWRDT+GRKTNF
Sbjct: 92   CSEDCSYCPQSSRYNTGLKPQRLMTKETVIEAAKRAKEAGSTRFCMGAAWRDTIGRKTNF 151

Query: 542  NQILDYVKEIREMGMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSREYYPNVITTRSY 721
            NQILDYVKEIR MGMEVCCTLGMLEKQQA ELKKAGLTAYNHNLDTSREYYPN+ITTRSY
Sbjct: 152  NQILDYVKEIRGMGMEVCCTLGMLEKQQAAELKKAGLTAYNHNLDTSREYYPNIITTRSY 211

Query: 722  DERLETLAFVREAGISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXXESVPINALVPVKGT 901
            DERLETL  VREAGISVCSGGIIGLGEAE+DRVG            ESVPINALV VKGT
Sbjct: 212  DERLETLEHVREAGISVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALVAVKGT 271

Query: 902  PLENQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFSGEKL 1081
            PL+ QKPVEIWEMIRMI +ARIVMPKAMVRLSAGRV FSM+EQALCFLAGANSIF+GEKL
Sbjct: 272  PLQEQKPVEIWEMIRMIGSARIVMPKAMVRLSAGRVSFSMAEQALCFLAGANSIFTGEKL 331

Query: 1082 LTTPNNDFDADQMMFKVLGLTPKAPKFS--EETKSAFEGERCKEAVSA 1219
            LTTPNND+DADQ+MFKVLGL PKAP FS  EE   A E ERC+EAVS+
Sbjct: 332  LTTPNNDYDADQLMFKVLGLIPKAPSFSADEEKACACEAERCQEAVSS 379


>ref|XP_002529753.1| biotin synthase, putative [Ricinus communis]
            gi|223530751|gb|EEF32619.1| biotin synthase, putative
            [Ricinus communis]
          Length = 375

 Score =  584 bits (1506), Expect = e-164
 Identities = 287/377 (76%), Positives = 326/377 (86%)
 Frame = +2

Query: 95   IRSVQQQLRLRPFILXXXXXXXXXXXXXXVQAERTIRDGPRNDWSTDEIKSIYNSPLLDL 274
            +RS+ +  +LRP  +              +QAERTI++GPRNDW+  EIK++Y+SPLLDL
Sbjct: 4    VRSIFRPQQLRPSFVFSYSSSAAA-----IQAERTIKEGPRNDWTRQEIKNVYDSPLLDL 58

Query: 275  LFHGAQVHRYAHNFREVQQCTLLSVKTGGCSEDCSYCPQSSRYDTGLKAQKLMNKDVVLE 454
            LFHGAQVHR+  NFREVQQCTLLS+KTGGCSEDCSYCPQSSRY+TGLKAQKLM KD VL+
Sbjct: 59   LFHGAQVHRHFQNFREVQQCTLLSIKTGGCSEDCSYCPQSSRYNTGLKAQKLMTKDDVLQ 118

Query: 455  AAQKAKDAGSTRFCMGAAWRDTVGRKTNFNQILDYVKEIREMGMEVCCTLGMLEKQQAME 634
            AA++AK+AGSTRFCMGAAWRDT+GRKTNFNQILDYVKEIR+MGMEVCCTLGMLEKQQA E
Sbjct: 119  AAKRAKEAGSTRFCMGAAWRDTIGRKTNFNQILDYVKEIRDMGMEVCCTLGMLEKQQAAE 178

Query: 635  LKKAGLTAYNHNLDTSREYYPNVITTRSYDERLETLAFVREAGISVCSGGIIGLGEAEDD 814
            LKKAGLTAYNHNLDTSREYYPN+I+TRSYDERL+TL  VRE GI+VCSGGIIGLGEAE+D
Sbjct: 179  LKKAGLTAYNHNLDTSREYYPNIISTRSYDERLKTLEHVREVGINVCSGGIIGLGEAEED 238

Query: 815  RVGXXXXXXXXXXXXESVPINALVPVKGTPLENQKPVEIWEMIRMIATARIVMPKAMVRL 994
            RVG            ESVPINAL+ VKGTPLE+QKPVEIWEMIRMIATARI+MPKAMVRL
Sbjct: 239  RVGLLHTLSTLPMHPESVPINALIAVKGTPLEDQKPVEIWEMIRMIATARIIMPKAMVRL 298

Query: 995  SAGRVRFSMSEQALCFLAGANSIFSGEKLLTTPNNDFDADQMMFKVLGLTPKAPKFSEET 1174
            SAGRVRFS++EQALCFL+GANSIF+GEKLLTTPNNDFDADQ+MFK+LGL PKAP F E+ 
Sbjct: 299  SAGRVRFSIAEQALCFLSGANSIFTGEKLLTTPNNDFDADQLMFKLLGLIPKAPSFPEDE 358

Query: 1175 KSAFEGERCKEAVSA*G 1225
            + A E E C+EAVS+ G
Sbjct: 359  ERALESENCQEAVSSSG 375


>ref|XP_004140874.1| PREDICTED: biotin synthase-like [Cucumis sativus]
          Length = 385

 Score =  584 bits (1505), Expect = e-164
 Identities = 283/343 (82%), Positives = 313/343 (91%)
 Frame = +2

Query: 182  VQAERTIRDGPRNDWSTDEIKSIYNSPLLDLLFHGAQVHRYAHNFREVQQCTLLSVKTGG 361
            V+AER +RDGPRNDW+  +I+ IY+SPLLDLLFHGAQVHR+ HNFREVQQCTLLS+KTGG
Sbjct: 39   VEAERLLRDGPRNDWTRQQIRDIYDSPLLDLLFHGAQVHRHTHNFREVQQCTLLSIKTGG 98

Query: 362  CSEDCSYCPQSSRYDTGLKAQKLMNKDVVLEAAQKAKDAGSTRFCMGAAWRDTVGRKTNF 541
            CSEDCSYCPQSSRYDTGLKAQKLM KDVVLEAA+KAK+AGSTRFCMGAAWRDT+GRKTNF
Sbjct: 99   CSEDCSYCPQSSRYDTGLKAQKLMTKDVVLEAAKKAKEAGSTRFCMGAAWRDTIGRKTNF 158

Query: 542  NQILDYVKEIREMGMEVCCTLGMLEKQQAMELKKAGLTAYNHNLDTSREYYPNVITTRSY 721
            NQILDYVKEIREMGMEVCCTLGM+EKQQA++LKKAGLTAYNHNLDTSREYYPN+ITTRSY
Sbjct: 159  NQILDYVKEIREMGMEVCCTLGMIEKQQAIDLKKAGLTAYNHNLDTSREYYPNIITTRSY 218

Query: 722  DERLETLAFVREAGISVCSGGIIGLGEAEDDRVGXXXXXXXXXXXXESVPINALVPVKGT 901
            DERL+TL FVR+AGI+VCSGGIIGLGEAE+DRVG            ESVPINALV VKGT
Sbjct: 219  DERLKTLEFVRDAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALVAVKGT 278

Query: 902  PLENQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFSGEKL 1081
            PL++QKPVEIWEMIRMIATARI MPKAMVRLSAGRV+FS+ EQALCFLAGANSIF+GEKL
Sbjct: 279  PLQDQKPVEIWEMIRMIATARITMPKAMVRLSAGRVKFSVPEQALCFLAGANSIFTGEKL 338

Query: 1082 LTTPNNDFDADQMMFKVLGLTPKAPKFSEETKSAFEGERCKEA 1210
            LTTPNNDFDADQ+MFK+LGL PKAP F+E+ + A E E  +EA
Sbjct: 339  LTTPNNDFDADQLMFKMLGLIPKAPSFTEDAEKAPEEESLQEA 381