BLASTX nr result

ID: Coptis21_contig00008925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008925
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61239.1| hypothetical protein VITISV_003190 [Vitis vinifera]    82   1e-13
ref|XP_002510318.1| conserved hypothetical protein [Ricinus comm...    74   3e-11
ref|XP_002301211.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-10
ref|XP_002327086.1| predicted protein [Populus trichocarpa] gi|2...    65   1e-08
ref|XP_002283824.1| PREDICTED: uncharacterized protein LOC100257...    62   1e-07

>emb|CAN61239.1| hypothetical protein VITISV_003190 [Vitis vinifera]
          Length = 99

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
 Frame = -1

Query: 595 MAFTLSSKTNHSEKQNKISNNSVDXXXXXXXXXTITRHLYLKPTHSTETLEKDAVLRRIR 416
           M+F +S     S    KI+N+  D         T+T +L+LKP  S++TL+KD VLRRIR
Sbjct: 1   MSFLVSKPQPSSSDSEKITNS--DDREDSDTLXTVTSYLHLKPAZSSQTLDKDLVLRRIR 58

Query: 415 HCKRVNKVRNALQAMFGSPFSGGSTV---DKMWLEDAFSAP 302
           H KRVNKVRN  Q +  SPFS   +    +K W++DAF+AP
Sbjct: 59  HRKRVNKVRNLFQTLVSSPFSTTDSFRVQEKKWVDDAFAAP 99


>ref|XP_002510318.1| conserved hypothetical protein [Ricinus communis]
           gi|223551019|gb|EEF52505.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
 Frame = -1

Query: 583 LSSKTNH--SEKQNKISNNSVDXXXXXXXXXT--ITRHLYLKPTHSTETLEKDAVLRRIR 416
           L SKT    SE +N  +NNS +            +T H++LKP HS++TL+KD VLRRIR
Sbjct: 4   LVSKTQPALSEAENNAANNSTEDQEDQEMLCGARVTTHVHLKPAHSSQTLDKDVVLRRIR 63

Query: 415 HCKRVNKVRNALQAMFGSPFSG-GSTVDKMWLEDAFSAP 302
             K  NKVR+ LQ   G P S     V   W++DAF+AP
Sbjct: 64  QRKCANKVRSVLQGFLGFPTSSKPDKVSVRWVDDAFAAP 102


>ref|XP_002301211.1| predicted protein [Populus trichocarpa] gi|222842937|gb|EEE80484.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
 Frame = -1

Query: 583 LSSKTNHSEKQNKISNNSVDXXXXXXXXXTITRHLYLKPTHSTETLEKDAVLRRIRHCKR 404
           +++ TN   K  +I  NSV            T  +YLKP HSTET +K+ VL+RIR  KR
Sbjct: 18  INNSTNTHTKDQEILINSV------------TSFIYLKPVHSTETRDKEEVLQRIRQRKR 65

Query: 403 VNKVRNALQAMFGSPFSGGS--TVDKMWLEDAFSAP 302
           VNKVR+ LQ   G  FS  S   V   W++DAF+AP
Sbjct: 66  VNKVRDRLQGFLGWLFSSKSENEVSVKWVDDAFAAP 101


>ref|XP_002327086.1| predicted protein [Populus trichocarpa] gi|222835401|gb|EEE73836.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
 Frame = -1

Query: 586 TLSSKTNHS-EKQNKISNNS---VDXXXXXXXXXTITRHLYLKPTHSTETLEKDAVLRRI 419
           +L+SKT  +  K  KI++N+              ++T  +Y+KP HST+T +K+ VL+RI
Sbjct: 3   SLASKTQSTLSKSEKITSNTSTATKDQEDPEIFNSVTSFVYIKPVHSTKTRDKEEVLQRI 62

Query: 418 RHCKRVNKVRNALQAMFGSPFSGGS--TVDKMWLEDAFSAP 302
           R  K  NKVR +LQ   G  FS  S   V   W++DAF+AP
Sbjct: 63  RQRKGANKVRGSLQGFLGWLFSSKSENKVSAKWVDDAFAAP 103


>ref|XP_002283824.1| PREDICTED: uncharacterized protein LOC100257464 [Vitis vinifera]
           gi|302142411|emb|CBI19614.3| unnamed protein product
           [Vitis vinifera]
          Length = 77

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 38/98 (38%), Positives = 52/98 (53%)
 Frame = -1

Query: 595 MAFTLSSKTNHSEKQNKISNNSVDXXXXXXXXXTITRHLYLKPTHSTETLEKDAVLRRIR 416
           M+F +S     S    KI+N+  D         T+T +L+LKP  S++TL+KD VLRRIR
Sbjct: 1   MSFLVSKPQPSSSDSEKITNS--DDREDSDTLLTVTSYLHLKPAQSSQTLDKDLVLRRIR 58

Query: 415 HCKRVNKVRNALQAMFGSPFSGGSTVDKMWLEDAFSAP 302
           H KRVNK                   +K W++DAF+AP
Sbjct: 59  HRKRVNK-------------------EKKWVDDAFAAP 77