BLASTX nr result

ID: Coptis21_contig00008923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008923
         (1139 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270792.1| PREDICTED: uncharacterized protein LOC100261...   218   3e-54
ref|XP_002521956.1| DNA binding protein, putative [Ricinus commu...   209   8e-52
emb|CAN72947.1| hypothetical protein VITISV_034305 [Vitis vinifera]   204   3e-50
ref|XP_003521778.1| PREDICTED: uncharacterized protein LOC100809...   196   7e-48
ref|XP_003554726.1| PREDICTED: uncharacterized protein LOC100816...   193   6e-47

>ref|XP_002270792.1| PREDICTED: uncharacterized protein LOC100261576 [Vitis vinifera]
            gi|296087886|emb|CBI35169.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  218 bits (554), Expect = 3e-54
 Identities = 128/238 (53%), Positives = 156/238 (65%), Gaps = 14/238 (5%)
 Frame = -1

Query: 1001 KKNQLNALGNAGQNFVSHVITVAAGEDVAQKIMSFTQQRKRAVCILSASGSISNASLRQP 822
            KK+QL +LGNAGQ+F  HVITVA+GEDVAQKIM F QQ KR +CI+SASGSISNASLRQP
Sbjct: 118  KKSQLVSLGNAGQSFTPHVITVASGEDVAQKIMFFMQQSKREICIMSASGSISNASLRQP 177

Query: 821  ATLGGNVTYEGRFEILSLSGSFLHNETDGASSRTGGLSVCLSGTDXXXXXXXXXXXXXXX 642
            AT GGNV YEGRFEILSL+GS++  E  G   RTGGLSVCLS TD               
Sbjct: 178  ATSGGNVAYEGRFEILSLTGSYVRTEIGG---RTGGLSVCLSNTDGEIIGGGVGGPLKAA 234

Query: 641  XXVQVIIGSFVIDTNKETNVDQKFEISSSKLPPQVIGATFSSVVYHSP-DSMGRTSGRVN 465
              VQVI+G+F++D+ K+T+   K + +S K    V GA+ S+V + S  +S GR     N
Sbjct: 235  GPVQVIVGTFLVDSKKDTSTGLKAD-ASPKFTSPVGGASVSNVGFRSAVESSGRIPVMGN 293

Query: 464  NDHQNIGVNNFMIQSRGMHSMPS--TDWRDSPSFT-----------DQGACQSSEDGD 330
            +DHQ IG ++FMIQSRGM   P+  TDWR  P               +GACQS E+GD
Sbjct: 294  DDHQGIGGSHFMIQSRGMQMAPTRPTDWRSGPDARINVGYDLAGRGGRGACQSPENGD 351


>ref|XP_002521956.1| DNA binding protein, putative [Ricinus communis]
            gi|223538760|gb|EEF40360.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 364

 Score =  209 bits (533), Expect = 8e-52
 Identities = 124/231 (53%), Positives = 151/231 (65%), Gaps = 7/231 (3%)
 Frame = -1

Query: 1001 KKNQLNALGNAGQNFVSHVITVAAGEDVAQKIMSFTQQRKRAVCILSASGSISNASLRQP 822
            K  QL ALGNAGQ F  HVI+V+AGEDVAQKIM F QQ +R +CILSASGSISNASLRQP
Sbjct: 131  KSQQLVALGNAGQGFTPHVISVSAGEDVAQKIMLFMQQCRREMCILSASGSISNASLRQP 190

Query: 821  ATLGGNVTYEGRFEILSLSGSFLHNETDGASSRTGGLSVCLSGTDXXXXXXXXXXXXXXX 642
            AT GGN+TYEGRFEI+SLSGS++  E  G   R GGLSVCLS +D               
Sbjct: 191  ATSGGNITYEGRFEIISLSGSYVRTEIGG---RAGGLSVCLSNSDGQIIGGGIGGPLIAG 247

Query: 641  XXVQVIIGSFVIDTNKETNVDQKFEISSSKLPPQVIGATFSSVVYHSP-DSMGRTSGRVN 465
              VQVIIG+FV+D  K+     K + SSSKLP    GA+ S++ + +P D+ GR + R N
Sbjct: 248  GPVQVIIGTFVVDNKKDVGSGGKVDASSSKLPSPGGGASMSNIGFRTPTDTSGRHTFRGN 307

Query: 464  NDHQNIGVNNFMIQSRGMHSMPS-TDWRDSPSF-----TDQGACQSSEDGD 330
            +DHQ +G N FMI  RGMH   S ++ R + +F        GA QS E+GD
Sbjct: 308  DDHQTMGGNPFMIPPRGMHDWSSGSEARVNATFELTGRRGHGARQSPENGD 358


>emb|CAN72947.1| hypothetical protein VITISV_034305 [Vitis vinifera]
          Length = 285

 Score =  204 bits (520), Expect = 3e-50
 Identities = 121/225 (53%), Positives = 148/225 (65%), Gaps = 1/225 (0%)
 Frame = -1

Query: 1001 KKNQLNALGNAGQNFVSHVITVAAGEDVAQKIMSFTQQRKRAVCILSASGSISNASLRQP 822
            KK+QL +LGNAGQ+F  HVITVA+GEDVAQKIM F QQ KR +CI+SASGSISNASLRQP
Sbjct: 73   KKSQLVSLGNAGQSFTPHVITVASGEDVAQKIMFFMQQSKREICIMSASGSISNASLRQP 132

Query: 821  ATLGGNVTYEGRFEILSLSGSFLHNETDGASSRTGGLSVCLSGTDXXXXXXXXXXXXXXX 642
            AT GGNV YEGRFEILSL+GS++  E  G   RTGGLSVCLS TD               
Sbjct: 133  ATSGGNVAYEGRFEILSLTGSYVRTEIGG---RTGGLSVCLSNTDGEIIGGGVGGPLKAA 189

Query: 641  XXVQVIIGSFVIDTNKETNVDQKFEISSSKLPPQVIGATFSSVVYHSP-DSMGRTSGRVN 465
              VQVI+G+F++D+ K+T+   K + +S K    V GA+ S+V + S  +S GR     N
Sbjct: 190  GPVQVIVGTFLVDSKKDTSTGLKAD-ASPKFTSPVGGASVSNVGFRSAVESSGRIPVMGN 248

Query: 464  NDHQNIGVNNFMIQSRGMHSMPSTDWRDSPSFTDQGACQSSEDGD 330
            +DHQ IG ++FMIQSRG                 +GACQS E+GD
Sbjct: 249  DDHQGIGGSHFMIQSRGRGG--------------RGACQSPENGD 279


>ref|XP_003521778.1| PREDICTED: uncharacterized protein LOC100809675 [Glycine max]
          Length = 346

 Score =  196 bits (499), Expect = 7e-48
 Identities = 121/235 (51%), Positives = 146/235 (62%), Gaps = 12/235 (5%)
 Frame = -1

Query: 1001 KKNQLNALGNAGQNFVSHVITVAAGEDVAQKIMSFTQQRKRAVCILSASGSISNASLRQP 822
            KK+   ALGNAGQ F  HVI+VAAGEDV QKIM F QQ +R +CILSASGSISNASLRQP
Sbjct: 109  KKSHSFALGNAGQGFTPHVISVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQP 168

Query: 821  ATLGGNVTYEGRFEILSLSGSFLHNETDGASSRTGGLSVCLSGTDXXXXXXXXXXXXXXX 642
            AT GG++ YEGRFEI+SL+GS++ NE     +RTGGLSVCLS TD               
Sbjct: 169  ATSGGSIAYEGRFEIISLTGSYVRNE---LGTRTGGLSVCLSNTDGQIIGGGVGGPLKAA 225

Query: 641  XXVQVIIGSFVIDTNKETNVDQKFEISSSKLPPQVIGATFSSVVY-HSPDSMGRTSGRVN 465
              VQVI+G+F ID  K+T    K +IS+SKLP  V G   SS+ +  S DS      R N
Sbjct: 226  GPVQVIVGTFFIDNKKDTGAGVKGDISASKLPSPV-GEPVSSLGFRQSVDSPSGNPIRGN 284

Query: 464  NDHQNIGVNNFMIQSRGMHSMP--STDWRDSPSFT---------DQGACQSSEDG 333
            ++HQ +G ++FMIQ  G+H  P  STDW    S             GA QS E+G
Sbjct: 285  DEHQAMGGSHFMIQQLGLHGTPPRSTDWGHPDSRNTGFELTGRIGHGAHQSPENG 339


>ref|XP_003554726.1| PREDICTED: uncharacterized protein LOC100816781 [Glycine max]
          Length = 356

 Score =  193 bits (491), Expect = 6e-47
 Identities = 118/234 (50%), Positives = 141/234 (60%), Gaps = 11/234 (4%)
 Frame = -1

Query: 1001 KKNQLNALGNAGQNFVSHVITVAAGEDVAQKIMSFTQQRKRAVCILSASGSISNASLRQP 822
            KK+   ALGNAGQ F  HVI+VAAGEDV QKIM F QQ +R +CILSASGSISNASLRQP
Sbjct: 119  KKSLSFALGNAGQGFTPHVISVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQP 178

Query: 821  ATLGGNVTYEGRFEILSLSGSFLHNETDGASSRTGGLSVCLSGTDXXXXXXXXXXXXXXX 642
            AT GG++TYEGRFEI+SL+GS++ NE     +RTGGLSVCLS TD               
Sbjct: 179  ATSGGSITYEGRFEIISLTGSYVRNE---LGTRTGGLSVCLSNTDGQIIGGGVGGPLKAA 235

Query: 641  XXVQVIIGSFVIDTNKETNVDQKFEISSSKLPPQVIGATFSSVVYHSPDSMGRTSGRVNN 462
              VQVI+G+F ID  K+     K + S+SKLP  V     S     S DS      R N+
Sbjct: 236  GPVQVIVGTFFIDNKKDNGAGLKGDASASKLPSPVSEPVSSLGFRQSVDSSSGNPIRGND 295

Query: 461  DHQNIGVNNFMIQSRGMHSMP--STDWRDSPS---------FTDQGACQSSEDG 333
            +HQ +  ++FMIQ  G+H  P  STDW    S          T  GA QS E+G
Sbjct: 296  EHQAMDGSHFMIQQLGLHGTPPRSTDWGRPDSRNTGFELTGRTGHGAHQSPENG 349


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