BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008915
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|2...   549   e-154
ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, p...   541   e-151
ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS ...   540   e-151
ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|2...   533   e-149
ref|XP_002891277.1| transcription factor [Arabidopsis lyrata sub...   514   e-143

>ref|XP_002302200.1| predicted protein [Populus trichocarpa] gi|222843926|gb|EEE81473.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  549 bits (1415), Expect = e-154
 Identities = 270/353 (76%), Positives = 309/353 (87%)
 Frame = -3

Query: 1222 IVQPVGQKRLTNVAVVRLKKHGLRFEIACFKNKVLSYRSGVEKDLDEVLQSHTVYSNVSK 1043
            ++QPVGQKRLTNVAVVRLKKHG+RFEIAC+KNKVLS+RSGVEKDLDEVLQSHTVYSNVSK
Sbjct: 5    LLQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYSNVSK 64

Query: 1042 GVLAKSRELNLAFGTDDHSKICLEILDKGELQVAGKERESQLSSQFRDIATIVMQKTINP 863
            GVLAK+ +L  AFG DDH+KICLEIL+KGELQVAGKER+SQLSSQFRDIATIVMQKTINP
Sbjct: 65   GVLAKNSDLVKAFGHDDHTKICLEILEKGELQVAGKERDSQLSSQFRDIATIVMQKTINP 124

Query: 862  ETQRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIHELQKQFPIKRAPMGLRLIIPQEK 683
            ETQRPYTISM+ERLMHEIHFAVDPH+SSKKQAL+VI ELQK FPIKR+PM LRL +  +K
Sbjct: 125  ETQRPYTISMVERLMHEIHFAVDPHSSSKKQALDVIRELQKHFPIKRSPMRLRLAVIGQK 184

Query: 682  FTSLSEKLNAWKTNIVSKDESGEHLAVVCEIEPSYFRDCDAMVRNLQGRVEILAVSVHFE 503
            F +L EKLNAW  N+VSKDESG H +V+CE++P +FRDCDA+VRNLQGR+EILAVSVHFE
Sbjct: 185  FPNLLEKLNAWDANVVSKDESGSHQSVICEMDPGFFRDCDALVRNLQGRMEILAVSVHFE 244

Query: 502  GDTSVDHYDDQEEFSSSHSKVLTDAVVKLSEKVQKPAISEGNGSTGAEAKQNKCSTCDAV 323
            GDT VD +DD E+   +  K   D+ V+LSEK+QK  ISE        AKQNKCSTC+A 
Sbjct: 245  GDTHVDDFDDYEDVPPALPKESADSEVQLSEKIQKQTISE-EKKADTLAKQNKCSTCNAF 303

Query: 322  IGDTKQYRDHFKSEWHKHNLKRKTRQLPPLTAEECMADVELGDVKNDLKEYSF 164
            +GD KQ+RDHFKS+WHKHNLKRKT+QLPPLTAEEC+AD++L D K DLKEYSF
Sbjct: 304  VGDAKQFRDHFKSDWHKHNLKRKTKQLPPLTAEECLADMDLNDSKADLKEYSF 356


>ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus
            communis] gi|223540466|gb|EEF42033.1|
            Shwachman-Bodian-Diamond syndrome protein, putative
            [Ricinus communis]
          Length = 356

 Score =  541 bits (1394), Expect = e-151
 Identities = 266/353 (75%), Positives = 305/353 (86%)
 Frame = -3

Query: 1222 IVQPVGQKRLTNVAVVRLKKHGLRFEIACFKNKVLSYRSGVEKDLDEVLQSHTVYSNVSK 1043
            ++QP+GQKRLTNVAVVRLKKHG RFEIAC+KNKVLS+RSGVEKDLDEVLQSHTVYSNVSK
Sbjct: 5    LMQPIGQKRLTNVAVVRLKKHGFRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYSNVSK 64

Query: 1042 GVLAKSRELNLAFGTDDHSKICLEILDKGELQVAGKERESQLSSQFRDIATIVMQKTINP 863
            GVLAKS++L  AFGTDD +KICLEIL+KGELQVAGKERESQL+SQFRDIAT+VMQKT+NP
Sbjct: 65   GVLAKSKDLEKAFGTDDQTKICLEILEKGELQVAGKERESQLTSQFRDIATMVMQKTVNP 124

Query: 862  ETQRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIHELQKQFPIKRAPMGLRLIIPQEK 683
            ETQRPYTISMIERLMHEIHFAVDPH+SSKKQALEVI ELQK FPIKR+PM LRL I +  
Sbjct: 125  ETQRPYTISMIERLMHEIHFAVDPHSSSKKQALEVIRELQKHFPIKRSPMRLRLAISEPN 184

Query: 682  FTSLSEKLNAWKTNIVSKDESGEHLAVVCEIEPSYFRDCDAMVRNLQGRVEILAVSVHFE 503
             +SL EKLN W   +VSKDESG  L+V+CE++P  FR+CD +VRNLQGR+EILA+SVHFE
Sbjct: 185  ISSLLEKLNTWNATVVSKDESGSQLSVICELDPGLFRECDVLVRNLQGRLEILAMSVHFE 244

Query: 502  GDTSVDHYDDQEEFSSSHSKVLTDAVVKLSEKVQKPAISEGNGSTGAEAKQNKCSTCDAV 323
            GD  VD YDD E+  +S  K  TD+VV+LSEK+QK  IS    + G E KQ+KC+TC+A 
Sbjct: 245  GDAHVDDYDDYEDVPASIPKESTDSVVQLSEKIQKQTISAEKKNEG-EVKQHKCNTCNAF 303

Query: 322  IGDTKQYRDHFKSEWHKHNLKRKTRQLPPLTAEECMADVELGDVKNDLKEYSF 164
            +GD K+YRDHFKSEWHKHNL+RKTR L PLTAEEC+ADVEL D K DLK+YSF
Sbjct: 304  VGDAKEYRDHFKSEWHKHNLRRKTRHLLPLTAEECLADVELDDSKADLKDYSF 356


>ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS [Vitis vinifera]
            gi|302142747|emb|CBI19950.3| unnamed protein product
            [Vitis vinifera]
          Length = 358

 Score =  540 bits (1391), Expect = e-151
 Identities = 270/359 (75%), Positives = 308/359 (85%), Gaps = 1/359 (0%)
 Frame = -3

Query: 1237 MSRTMIVQPVGQKRLTNVAVVRLKKHGLRFEIACFKNKVLSYRSGVEKDLDEVLQSHTVY 1058
            MSR ++ QP+GQKRLTNVAVVRLKK G+RFEIAC+KNKVLS+RSGVEKDLDEVLQSH VY
Sbjct: 1    MSR-VVQQPIGQKRLTNVAVVRLKKKGIRFEIACYKNKVLSWRSGVEKDLDEVLQSHIVY 59

Query: 1057 SNVSKGVLAKSRELNLAFGTD-DHSKICLEILDKGELQVAGKERESQLSSQFRDIATIVM 881
            SNVSKGVLAKS++L  AFG + D ++I LEILDKGELQVAGKERESQLSSQFRDIATIVM
Sbjct: 60   SNVSKGVLAKSKDLEAAFGKERDQTEILLEILDKGELQVAGKERESQLSSQFRDIATIVM 119

Query: 880  QKTINPETQRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIHELQKQFPIKRAPMGLRL 701
            QKTINPETQRPYT SMIERLMHEIHF+VDP++SSKKQALEVI ELQK FPIKR PM LRL
Sbjct: 120  QKTINPETQRPYTSSMIERLMHEIHFSVDPNSSSKKQALEVIRELQKHFPIKRCPMRLRL 179

Query: 700  IIPQEKFTSLSEKLNAWKTNIVSKDESGEHLAVVCEIEPSYFRDCDAMVRNLQGRVEILA 521
             +PQ+ F+SL EKLN W  +IVSKDESG  L+++CE+EP  FRDCDA+VRNLQGR+EILA
Sbjct: 180  TVPQQNFSSLLEKLNVWNASIVSKDESGGQLSIICEMEPGIFRDCDALVRNLQGRLEILA 239

Query: 520  VSVHFEGDTSVDHYDDQEEFSSSHSKVLTDAVVKLSEKVQKPAISEGNGSTGAEAKQNKC 341
            VS+H EGDT VD YDD E   S   K   D V++LSEKVQ+  IS G+ ST  E KQNKC
Sbjct: 240  VSLHMEGDTHVDDYDDHEHVPSRLPKESADPVLQLSEKVQRQTISVGSSSTEGEVKQNKC 299

Query: 340  STCDAVIGDTKQYRDHFKSEWHKHNLKRKTRQLPPLTAEECMADVELGDVKNDLKEYSF 164
            STCDA +GD+KQYR+HFKSEWHKHNL RKTRQLPPL+AEEC+ D+E+ D+K DLK+YSF
Sbjct: 300  STCDAFVGDSKQYREHFKSEWHKHNLGRKTRQLPPLSAEECLTDMEMNDLKADLKDYSF 358


>ref|XP_002306675.1| predicted protein [Populus trichocarpa] gi|222856124|gb|EEE93671.1|
            predicted protein [Populus trichocarpa]
          Length = 357

 Score =  533 bits (1374), Expect = e-149
 Identities = 261/352 (74%), Positives = 302/352 (85%), Gaps = 1/352 (0%)
 Frame = -3

Query: 1216 QPVGQKRLTNVAVVRLKKHGLRFEIACFKNKVLSYRSGVEKDLDEVLQSH-TVYSNVSKG 1040
            QPVGQKRLTNVAVVRLKKHG+RFEIAC+KNKVLS+RSGVEKDLDEVLQSH TVYSNVSKG
Sbjct: 7    QPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHHTVYSNVSKG 66

Query: 1039 VLAKSRELNLAFGTDDHSKICLEILDKGELQVAGKERESQLSSQFRDIATIVMQKTINPE 860
            +LAKS +LN AFG DD ++ICLEILDKGELQVAGKERESQLSSQFRDIATIVMQKTINPE
Sbjct: 67   ILAKSLDLNKAFGHDDQTRICLEILDKGELQVAGKERESQLSSQFRDIATIVMQKTINPE 126

Query: 859  TQRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIHELQKQFPIKRAPMGLRLIIPQEKF 680
            TQRPYTISMIERLMHE HFAV+PHNSSKKQAL+VI ELQK FPIKR+PM L L +  + F
Sbjct: 127  TQRPYTISMIERLMHETHFAVEPHNSSKKQALDVIRELQKHFPIKRSPMRLGLTVSGQNF 186

Query: 679  TSLSEKLNAWKTNIVSKDESGEHLAVVCEIEPSYFRDCDAMVRNLQGRVEILAVSVHFEG 500
            ++L EKL AW  N+VSKDESG   +++CE++P +FRDCD +VRNLQGR+EILAVSVHFE 
Sbjct: 187  STLLEKLGAWDANVVSKDESGSRQSIICEMDPGFFRDCDTLVRNLQGRLEILAVSVHFEE 246

Query: 499  DTSVDHYDDQEEFSSSHSKVLTDAVVKLSEKVQKPAISEGNGSTGAEAKQNKCSTCDAVI 320
            DT VD YDD E+  S+  K  TD+ V+LSEK+QK  +S+     GAE KQNKCSTC+  +
Sbjct: 247  DTHVDDYDDYEDVPSALPKGSTDSAVQLSEKIQKQTLSD-EKKAGAEVKQNKCSTCNVSV 305

Query: 319  GDTKQYRDHFKSEWHKHNLKRKTRQLPPLTAEECMADVELGDVKNDLKEYSF 164
            GD KQ+RDHFKS+WHKHNLKRKT+QLPPLT+EEC+ D+++ D   D+KEYSF
Sbjct: 306  GDAKQFRDHFKSDWHKHNLKRKTKQLPPLTSEECLGDMDMNDSNTDIKEYSF 357


>ref|XP_002891277.1| transcription factor [Arabidopsis lyrata subsp. lyrata]
            gi|297337119|gb|EFH67536.1| transcription factor
            [Arabidopsis lyrata subsp. lyrata]
          Length = 370

 Score =  514 bits (1325), Expect = e-143
 Identities = 253/371 (68%), Positives = 310/371 (83%), Gaps = 13/371 (3%)
 Frame = -3

Query: 1237 MSRTMIVQPVGQKRLTNVAVVRLKKHGLRFEIACFKNKVLSYRSGVEKDLDEVLQSHTVY 1058
            MS+T+ VQPVGQKRLTNVAVVRLKK G RFEIAC+KNKVLS+RSGVEKD+DEVLQSHTVY
Sbjct: 1    MSKTL-VQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVY 59

Query: 1057 SNVSKGVLAKSRELNLAFGTDDHSKICLEILDKGELQVAGKERESQLSSQFRDIATIVMQ 878
            SNVSKGVLAKS++L  AFG+DDH+KIC++IL+KGELQVAGKERESQ SSQFRDIATIVMQ
Sbjct: 60   SNVSKGVLAKSKDLMKAFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQ 119

Query: 877  KTINPETQRPYTISMIERLMHEIHFAVDPHNSSKKQALEVIHELQKQFPIKRAPMGLRLI 698
            KTINPETQRPYTI M+ERLMHEIHFAVDPH++SKKQAL+VI ELQKQFPIKR+PM LRL 
Sbjct: 120  KTINPETQRPYTIGMVERLMHEIHFAVDPHSNSKKQALDVIRELQKQFPIKRSPMRLRLT 179

Query: 697  IPQEKFTSLSEKLNAWKTNIVSKDESGEHLAVVCEIEPSYFRDCDAMVRNLQGRVEILAV 518
            +P + F SL EKL  W+ ++VSKDESG  ++ VCE+EP  FR+CD+ VRN+QGR+EILAV
Sbjct: 180  VPVQNFPSLLEKLKEWEASVVSKDESGTQMSTVCEMEPGLFRECDSHVRNMQGRLEILAV 239

Query: 517  SVHFEGDTSVDHYDDQEEF----------SSSHSKVLTDAVVKLSEKVQKPAISEGN--- 377
            SVH EGDT++DHYD+ ++           + + +K LTD V++LS+K+QK  IS  +   
Sbjct: 240  SVHAEGDTNMDHYDEHDDMAFQTHKPLLPADTETKDLTDPVIELSKKMQKQEISTADTIK 299

Query: 376  GSTGAEAKQNKCSTCDAVIGDTKQYRDHFKSEWHKHNLKRKTRQLPPLTAEECMADVELG 197
               G E K  KCSTC+  +G+ K+YR+H KS+WHKHNLKRKTR+LPPL+AEECM+++++ 
Sbjct: 300  QEGGEEKKGTKCSTCNTFVGEAKEYREHCKSDWHKHNLKRKTRKLPPLSAEECMSEIDMD 359

Query: 196  DVKNDLKEYSF 164
            D + DLK+YSF
Sbjct: 360  DSRADLKDYSF 370