BLASTX nr result

ID: Coptis21_contig00008912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008912
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   428   e-118
dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas]                          426   e-117
ref|XP_004171175.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   424   e-116
ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   423   e-116
ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116

>ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Vitis vinifera]
           gi|297743441|emb|CBI36308.3| unnamed protein product
           [Vitis vinifera]
          Length = 428

 Score =  428 bits (1101), Expect = e-118
 Identities = 212/249 (85%), Positives = 225/249 (90%)
 Frame = +2

Query: 98  MGEPKDNNNXXXXXXXXXXXXXXXKAPDSIGTKPTNESAKKGYVGIHSSGFRDFLLKPEL 277
           MGE +DN+                KAPDS+ +K   ESAKKGYVGIHSSGFRDFLLKPEL
Sbjct: 1   MGEARDND--AYEEELLDYEEEDEKAPDSVASKAAGESAKKGYVGIHSSGFRDFLLKPEL 58

Query: 278 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 457
           LR+IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA
Sbjct: 59  LRSIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 118

Query: 458 LVLCHTRELAYQICHEFERFSKYLPDIKVSVFYGGVSIKTHRDLLKNECPHIVVGTPGRV 637
           LVLCHTRELAYQICHEFERFS YLPDIKV+VFYGGVSIKTH+DLLKNECPHIVVGTPGR+
Sbjct: 119 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVSIKTHKDLLKNECPHIVVGTPGRI 178

Query: 638 LGLARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFRMTPHDKQVMMFSATLNKEIR 817
           L LARDKDL LK+VRHFILDECDKMLESLDMR+DVQ+IF+MTPHDKQVMMFSATL+KEIR
Sbjct: 179 LALARDKDLGLKHVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 238

Query: 818 PVCKKFMQD 844
           PVCKKFMQD
Sbjct: 239 PVCKKFMQD 247


>dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas]
          Length = 455

 Score =  426 bits (1096), Expect = e-117
 Identities = 212/249 (85%), Positives = 223/249 (89%)
 Frame = +2

Query: 98  MGEPKDNNNXXXXXXXXXXXXXXXKAPDSIGTKPTNESAKKGYVGIHSSGFRDFLLKPEL 277
           MGE KDN+                KAPDS+  K   ESAKKGYVGIHSSGFRDFLLKPEL
Sbjct: 1   MGEVKDND--AYEEELLDYEEEDEKAPDSVSAKAGAESAKKGYVGIHSSGFRDFLLKPEL 58

Query: 278 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 457
           LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA
Sbjct: 59  LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 118

Query: 458 LVLCHTRELAYQICHEFERFSKYLPDIKVSVFYGGVSIKTHRDLLKNECPHIVVGTPGRV 637
           LVLCHTRELAYQICHEFERFS YLPDIKV+VFYGGV+IK H+D+LKNECPHIVVGTPGR+
Sbjct: 119 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDILKNECPHIVVGTPGRI 178

Query: 638 LGLARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFRMTPHDKQVMMFSATLNKEIR 817
           L LARDKDL LKNVRHFILDECDKMLESLDMR+DVQ+IF+MTPHDKQVMMFSATL+KEIR
Sbjct: 179 LALARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 238

Query: 818 PVCKKFMQD 844
           PVCKKFMQD
Sbjct: 239 PVCKKFMQD 247


>ref|XP_004171175.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Cucumis
           sativus]
          Length = 427

 Score =  424 bits (1089), Expect = e-116
 Identities = 208/249 (83%), Positives = 223/249 (89%)
 Frame = +2

Query: 98  MGEPKDNNNXXXXXXXXXXXXXXXKAPDSIGTKPTNESAKKGYVGIHSSGFRDFLLKPEL 277
           MGE +DN                 KAPDS+G K   E+ KKGYVGIHSSGFRDFLLKPEL
Sbjct: 1   MGETRDNE---YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPEL 57

Query: 278 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 457
           LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+PVAGQV+A
Sbjct: 58  LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSA 117

Query: 458 LVLCHTRELAYQICHEFERFSKYLPDIKVSVFYGGVSIKTHRDLLKNECPHIVVGTPGRV 637
           LVLCHTRELAYQICHEFERFS YLPD+KV+VFYGGV+IK H+DLLKNECPHIVVGTPGR+
Sbjct: 118 LVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRI 177

Query: 638 LGLARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFRMTPHDKQVMMFSATLNKEIR 817
           L L+RDKDLSLKNVRHFILDECDKMLESLDMR+DVQ+IF+MTPHDKQVMMFSATL+KEIR
Sbjct: 178 LALSRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 237

Query: 818 PVCKKFMQD 844
           PVCKKFMQD
Sbjct: 238 PVCKKFMQD 246


>ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis
           vinifera]
          Length = 428

 Score =  423 bits (1088), Expect = e-116
 Identities = 210/249 (84%), Positives = 223/249 (89%)
 Frame = +2

Query: 98  MGEPKDNNNXXXXXXXXXXXXXXXKAPDSIGTKPTNESAKKGYVGIHSSGFRDFLLKPEL 277
           MGE +DN+                KAPDS+  K   E+AKKGYVGIHSSGFRDFLLKPEL
Sbjct: 1   MGETRDND--AYEEELLDYEEEEDKAPDSVTGKVNGEAAKKGYVGIHSSGFRDFLLKPEL 58

Query: 278 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 457
           LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPV GQVAA
Sbjct: 59  LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVTGQVAA 118

Query: 458 LVLCHTRELAYQICHEFERFSKYLPDIKVSVFYGGVSIKTHRDLLKNECPHIVVGTPGRV 637
           LVLCHTRELAYQICHEFERFS YLPDIKV+VFYGGV+IK H+DLLKNECPHIVVGTPGR+
Sbjct: 119 LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRI 178

Query: 638 LGLARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFRMTPHDKQVMMFSATLNKEIR 817
           L LARDKDL+LKNVRHFILDECDKMLESLDMR+DVQ+IF+MTPHDKQVMMFSATL+KEIR
Sbjct: 179 LALARDKDLALKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 238

Query: 818 PVCKKFMQD 844
           PVCKKFMQD
Sbjct: 239 PVCKKFMQD 247


>ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|222855599|gb|EEE93146.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  423 bits (1088), Expect = e-116
 Identities = 208/249 (83%), Positives = 222/249 (89%)
 Frame = +2

Query: 98  MGEPKDNNNXXXXXXXXXXXXXXXKAPDSIGTKPTNESAKKGYVGIHSSGFRDFLLKPEL 277
           MGE +DN+                KAPDS+G K   E+ KKGYVGIHSSGFRDFLLKPEL
Sbjct: 1   MGETRDNDTYEEELLDYEEEDE--KAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPEL 58

Query: 278 LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAA 457
           LR+IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP +GQV A
Sbjct: 59  LRSIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIA 118

Query: 458 LVLCHTRELAYQICHEFERFSKYLPDIKVSVFYGGVSIKTHRDLLKNECPHIVVGTPGRV 637
           LVLCHTRELAYQICHEFERFS YLPD KV+VFYGGV+IKTH+DLLKNECPHIVVGTPGR+
Sbjct: 119 LVLCHTRELAYQICHEFERFSTYLPDTKVAVFYGGVNIKTHKDLLKNECPHIVVGTPGRI 178

Query: 638 LGLARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFRMTPHDKQVMMFSATLNKEIR 817
           L LARDKDLSLKNVRHFILDECDKMLESLDMR+DVQ+IF+MTPHDKQVMMFSATL+KEIR
Sbjct: 179 LALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIR 238

Query: 818 PVCKKFMQD 844
           PVCKKFMQD
Sbjct: 239 PVCKKFMQD 247


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