BLASTX nr result

ID: Coptis21_contig00008897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008897
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001131166.1| uncharacterized protein LOC100192474 [Zea ma...    83   8e-14
ref|NP_174536.1| putative plastid developmental protein DAG [Ara...    83   1e-13
ref|XP_002890997.1| hypothetical protein ARALYDRAFT_473448 [Arab...    83   1e-13
ref|XP_003580460.1| PREDICTED: DAG protein, chloroplastic-like [...    82   2e-13
emb|CAD41861.2| OSJNBa0041A02.8 [Oryza sativa Japonica Group] gi...    82   2e-13

>ref|NP_001131166.1| uncharacterized protein LOC100192474 [Zea mays]
           gi|194690760|gb|ACF79464.1| unknown [Zea mays]
          Length = 217

 Score = 83.2 bits (204), Expect = 8e-14
 Identities = 45/111 (40%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
 Frame = +3

Query: 276 PLKSG---DWTPPQVGPLAPDWDVGRWVFVFEFSKFKSYSSIELYHYFVKAVAPVLGSEE 446
           PL+SG   D  P ++ PL P  D   W+ V +    +  +  ++   +++ +A VLGSEE
Sbjct: 56  PLRSGQGGDRAPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAQVLGSEE 115

Query: 447 EAKKKIYLISCEPESVGFGAYVDEQTKDKIKFLPGVRDVFKDCFVRSRNMD 599
           EAKKKIY +SCE    GFG  +DE+T +K++ LPGV  V  D +V + N D
Sbjct: 116 EAKKKIYNVSCE-RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKD 165


>ref|NP_174536.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
           gi|12322451|gb|AAG51246.1|AC055769_5 plastid protein,
           putative; 23108-24430 [Arabidopsis thaliana]
           gi|17381078|gb|AAL36351.1| putative plastid protein
           [Arabidopsis thaliana] gi|20465721|gb|AAM20329.1|
           putative plastid protein [Arabidopsis thaliana]
           gi|332193385|gb|AEE31506.1| putative plastid
           developmental protein DAG [Arabidopsis thaliana]
          Length = 229

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 44/112 (39%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
 Frame = +3

Query: 276 PLKSG----DWTPPQVGPLAPDWDVGRWVFVFEFSKFKSYSSIELYHYFVKAVAPVLGSE 443
           PLKSG    D  P ++ PL P  D   W+ V +    ++ +  ++   +V+ +A ++GSE
Sbjct: 69  PLKSGSNFSDRAPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLAKIIGSE 128

Query: 444 EEAKKKIYLISCEPESVGFGAYVDEQTKDKIKFLPGVRDVFKDCFVRSRNMD 599
           EEAKKKIY +SCE    GFG  +DE+T +K++ LPGV  +  D +V   N D
Sbjct: 129 EEAKKKIYNVSCE-RYFGFGCEIDEETSNKLEGLPGVLFILPDSYVDQENKD 179


>ref|XP_002890997.1| hypothetical protein ARALYDRAFT_473448 [Arabidopsis lyrata subsp.
           lyrata] gi|297336839|gb|EFH67256.1| hypothetical protein
           ARALYDRAFT_473448 [Arabidopsis lyrata subsp. lyrata]
          Length = 229

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
 Frame = +3

Query: 276 PLKSG----DWTPPQVGPLAPDWDVGRWVFVFEFSKFKSYSSIELYHYFVKAVAPVLGSE 443
           PLKSG    D  P ++ PL P  D   W+ V +    ++ +  ++   +V+ +A +LGSE
Sbjct: 69  PLKSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGENATKQQMIDCYVQTLAKILGSE 128

Query: 444 EEAKKKIYLISCEPESVGFGAYVDEQTKDKIKFLPGVRDVFKDCFVRSRNMD 599
           EEAKKKIY +SCE    GFG  +DE+T +K + LPGV  V  D +V   N D
Sbjct: 129 EEAKKKIYNVSCE-RYFGFGCEIDEETSNKFEGLPGVLFVLPDSYVDQENKD 179


>ref|XP_003580460.1| PREDICTED: DAG protein, chloroplastic-like [Brachypodium
           distachyon]
          Length = 215

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
 Frame = +3

Query: 276 PLKSG---DWTPPQVGPLAPDWDVGRWVFVFEFSKFKSYSSIELYHYFVKAVAPVLGSEE 446
           PL+SG   D  P ++ PL P  D   W+ V +    +  +  ++   +++ +A V+GSEE
Sbjct: 54  PLRSGQGGDRAPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEE 113

Query: 447 EAKKKIYLISCEPESVGFGAYVDEQTKDKIKFLPGVRDVFKDCFVRSRNMD 599
           EAKKKIY +SCE    GFG  +DE+T +K++ LPGV  V  D +V + N D
Sbjct: 114 EAKKKIYNVSCE-RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKD 163


>emb|CAD41861.2| OSJNBa0041A02.8 [Oryza sativa Japonica Group]
           gi|116310924|emb|CAH67862.1| B0403H10-OSIGBa0105A11.14
           [Oryza sativa Indica Group] gi|218195501|gb|EEC77928.1|
           hypothetical protein OsI_17265 [Oryza sativa Indica
           Group] gi|222629485|gb|EEE61617.1| hypothetical protein
           OsJ_16041 [Oryza sativa Japonica Group]
          Length = 223

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
 Frame = +3

Query: 276 PLKSG---DWTPPQVGPLAPDWDVGRWVFVFEFSKFKSYSSIELYHYFVKAVAPVLGSEE 446
           PL+SG   D  P ++ PL P  D   W+ V +    +  +  ++   +++ +A V+GSEE
Sbjct: 62  PLRSGQGGDRAPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIQTLAKVVGSEE 121

Query: 447 EAKKKIYLISCEPESVGFGAYVDEQTKDKIKFLPGVRDVFKDCFVRSRNMD 599
           EAKKKIY +SCE    GFG  +DE+T +K++ LPGV  V  D +V + N D
Sbjct: 122 EAKKKIYNVSCE-RYFGFGCEIDEETSNKLEGLPGVLFVLPDSYVDAENKD 171