BLASTX nr result

ID: Coptis21_contig00008892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008892
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69261.1| hypothetical protein VITISV_004029 [Vitis vinifera]   163   1e-38
ref|XP_002273698.2| PREDICTED: charged multivesicular body prote...   159   2e-37
emb|CBI37046.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_002515169.1| Protein CHMP7, putative [Ricinus communis] g...   158   4e-37
ref|XP_002302811.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36

>emb|CAN69261.1| hypothetical protein VITISV_004029 [Vitis vinifera]
          Length = 418

 Score =  163 bits (413), Expect = 1e-38
 Identities = 86/153 (56%), Positives = 117/153 (76%)
 Frame = -1

Query: 460 GNKQVALRHVRQLKLSSESRERCTSLLNRVEEVLNVIVNAESTKKVSEAIQIGAKAIKEC 281
           GNK+VALRH + LKL+SESRE+C S LNRVEEVL++I NAESTKKVSEAIQIGA+AIKE 
Sbjct: 236 GNKKVALRHAKALKLASESREKCISFLNRVEEVLSLIANAESTKKVSEAIQIGAQAIKEN 295

Query: 280 GISMEEVQQCLEELDARVSSQKEVEEALGSAALAYTGIEDEDVEEEFKKLEMELGDEIPI 101
            I +EEVQ+CL+EL   + SQK+V+EAL  +  +Y  IEDED+EEEF+KLE+ELG++ P 
Sbjct: 296 RIDVEEVQRCLQELGDSIDSQKQVQEALAESDPSYADIEDEDIEEEFRKLELELGNQNPQ 355

Query: 100 KQIFETVADSSAVVQGSLVSAGSVDKTVSNMKV 2
             + +   D++A    +  S+ S+   +S++K+
Sbjct: 356 ILVSQAGVDTAAGETEASESSKSLCDALSDLKL 388


>ref|XP_002273698.2| PREDICTED: charged multivesicular body protein 7 [Vitis vinifera]
          Length = 478

 Score =  159 bits (403), Expect = 2e-37
 Identities = 85/153 (55%), Positives = 116/153 (75%)
 Frame = -1

Query: 460 GNKQVALRHVRQLKLSSESRERCTSLLNRVEEVLNVIVNAESTKKVSEAIQIGAKAIKEC 281
           GNK+VALRH + LKL+SESRE+C S LNRVEEVL++I NAESTKKVSEAIQIGA+AI+E 
Sbjct: 296 GNKKVALRHAKALKLASESREKCISFLNRVEEVLSLIANAESTKKVSEAIQIGARAIQEN 355

Query: 280 GISMEEVQQCLEELDARVSSQKEVEEALGSAALAYTGIEDEDVEEEFKKLEMELGDEIPI 101
            I +EEVQ+CL+EL   + SQK+VEEAL  +  +Y  IEDED+EEEF+KLE+ELG++   
Sbjct: 356 RIDVEEVQRCLQELGDSIDSQKQVEEALAESDPSYVDIEDEDIEEEFRKLELELGNQNLQ 415

Query: 100 KQIFETVADSSAVVQGSLVSAGSVDKTVSNMKV 2
             + +   D++A    +  S+ S+   +S++K+
Sbjct: 416 ILVSQAGVDTAAGETEASESSKSLCDALSDLKL 448


>emb|CBI37046.3| unnamed protein product [Vitis vinifera]
          Length = 438

 Score =  159 bits (403), Expect = 2e-37
 Identities = 85/153 (55%), Positives = 116/153 (75%)
 Frame = -1

Query: 460 GNKQVALRHVRQLKLSSESRERCTSLLNRVEEVLNVIVNAESTKKVSEAIQIGAKAIKEC 281
           GNK+VALRH + LKL+SESRE+C S LNRVEEVL++I NAESTKKVSEAIQIGA+AI+E 
Sbjct: 256 GNKKVALRHAKALKLASESREKCISFLNRVEEVLSLIANAESTKKVSEAIQIGARAIQEN 315

Query: 280 GISMEEVQQCLEELDARVSSQKEVEEALGSAALAYTGIEDEDVEEEFKKLEMELGDEIPI 101
            I +EEVQ+CL+EL   + SQK+VEEAL  +  +Y  IEDED+EEEF+KLE+ELG++   
Sbjct: 316 RIDVEEVQRCLQELGDSIDSQKQVEEALAESDPSYVDIEDEDIEEEFRKLELELGNQNLQ 375

Query: 100 KQIFETVADSSAVVQGSLVSAGSVDKTVSNMKV 2
             + +   D++A    +  S+ S+   +S++K+
Sbjct: 376 ILVSQAGVDTAAGETEASESSKSLCDALSDLKL 408


>ref|XP_002515169.1| Protein CHMP7, putative [Ricinus communis]
           gi|223545649|gb|EEF47153.1| Protein CHMP7, putative
           [Ricinus communis]
          Length = 438

 Score =  158 bits (400), Expect = 4e-37
 Identities = 88/156 (56%), Positives = 119/156 (76%), Gaps = 3/156 (1%)
 Frame = -1

Query: 460 GNKQVALRHVRQLKLSSESRERCTSLLNRVEEVLNVIVNAESTKKVSEAIQIGAKAIKEC 281
           GNK++ALRH R +KL+S+SRE+CTSL NRVEEVLN+I +AESTKKV+EAIQIGA+A+K+ 
Sbjct: 257 GNKKMALRHARDMKLASDSREKCTSLFNRVEEVLNIIADAESTKKVTEAIQIGAQAMKQN 316

Query: 280 GISMEEVQQCLEELDARVSSQKEVEEALGSAALAYTGIEDEDVEEEFKKLEMELGD---E 110
            I++EEV  CLEEL+  + SQK+VE+AL S   +YT IEDED+EEEFKKLEME+G    +
Sbjct: 317 KITVEEVDLCLEELEENIDSQKQVEKALESTP-SYTVIEDEDIEEEFKKLEMEVGTVDLQ 375

Query: 109 IPIKQIFETVADSSAVVQGSLVSAGSVDKTVSNMKV 2
            P+ +I   ++ +S     S VS  S+   +SN+K+
Sbjct: 376 SPVPRI--GMSSTSGETDNS-VSTDSLSDALSNLKL 408


>ref|XP_002302811.1| predicted protein [Populus trichocarpa] gi|222844537|gb|EEE82084.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score =  154 bits (389), Expect = 7e-36
 Identities = 85/153 (55%), Positives = 117/153 (76%)
 Frame = -1

Query: 460 GNKQVALRHVRQLKLSSESRERCTSLLNRVEEVLNVIVNAESTKKVSEAIQIGAKAIKEC 281
           GNK+VALRH R++KL+ ESRERCTSLLNRVEEVLNVI NAEST+KV+EAI+IGA+A+K+ 
Sbjct: 258 GNKKVALRHAREMKLALESRERCTSLLNRVEEVLNVIANAESTQKVTEAIRIGAEAMKQN 317

Query: 280 GISMEEVQQCLEELDARVSSQKEVEEALGSAALAYTGIEDEDVEEEFKKLEMELGDEIPI 101
            I++EEV+ CLEEL+  + +QK+VE+AL S  +  +GIEDED+EEE +KLE+EL  E   
Sbjct: 318 KITVEEVENCLEELEESIDAQKQVEKALESNPI--SGIEDEDIEEELEKLELELESE--N 373

Query: 100 KQIFETVADSSAVVQGSLVSAGSVDKTVSNMKV 2
            QI +    +++    +L S  S+   +SN+K+
Sbjct: 374 LQISKVEVGNTSGEMDALGSPDSLTDALSNLKL 406


Top