BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008880
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]     151   6e-35
gb|ABA95799.2| retrotransposon protein, putative, unclassified, ...   147   7e-34
gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group]    144   6e-33
emb|CAN68274.1| hypothetical protein VITISV_032833 [Vitis vinifera]   143   1e-32
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   142   4e-32

>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1419

 Score =  151 bits (381), Expect = 6e-35
 Identities = 71/136 (52%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
 Frame = -2

Query: 407  KSTHLPFSSSNEISTVSPFTLVHSDVW-QSPTVSHSGYKYYVLFTDDFTRFTWLYFMKHK 231
            K   LP+ SS   ST SPF LVHSDVW  +P  S  G++YYV+F DDF+R+TW+YFMKH+
Sbjct: 677  KQVQLPYRSSMSRST-SPFALVHSDVWGPAPFHSKGGHRYYVIFVDDFSRYTWIYFMKHR 735

Query: 230  SEVFSHFENFLAYIKTQFSSNLQNFQSDGGGEFDNGNFKTLCSTHGIHHRFSCPHTPEQN 51
            SE++  +++F + + TQFS++++NF+SD GGE+ +  F+ L S HG   + SCP    QN
Sbjct: 736  SELYQVYKSFASMVHTQFSTSIKNFRSDSGGEYLSNAFRQLLSDHGTLPQLSCPGAHAQN 795

Query: 50   GLAERKHRHIADMART 3
            G+AERKHRHI + ART
Sbjct: 796  GVAERKHRHIIETART 811


>gb|ABA95799.2| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 2156

 Score =  147 bits (372), Expect = 7e-34
 Identities = 66/126 (52%), Positives = 89/126 (70%)
 Frame = -2

Query: 380  SNEISTVSPFTLVHSDVWQSPTVSHSGYKYYVLFTDDFTRFTWLYFMKHKSEVFSHFENF 201
            S  + ++ PF L+HSDVW SP VS SG KY+V F D ++R TWLY M+HK EVF  F+NF
Sbjct: 900  SRGLRSMLPFMLIHSDVWTSPMVSMSGMKYFVTFIDCYSRMTWLYLMRHKDEVFKCFQNF 959

Query: 200  LAYIKTQFSSNLQNFQSDGGGEFDNGNFKTLCSTHGIHHRFSCPHTPEQNGLAERKHRHI 21
             AYIK  F++ +Q  ++D GGE+ N  F +  S+ GI H+ SCP TP QNG+AERK+RH+
Sbjct: 960  YAYIKNHFNARVQFIRTDNGGEYINNEFSSFLSSEGILHQTSCPDTPPQNGVAERKNRHL 1019

Query: 20   ADMART 3
             + AR+
Sbjct: 1020 LETARS 1025


>gb|AAL68641.1|AF458765_1 polyprotein [Oryza sativa Japonica Group]
          Length = 1472

 Score =  144 bits (364), Expect = 6e-33
 Identities = 65/126 (51%), Positives = 87/126 (69%)
 Frame = -2

Query: 380 SNEISTVSPFTLVHSDVWQSPTVSHSGYKYYVLFTDDFTRFTWLYFMKHKSEVFSHFENF 201
           S  + ++ PF L+HSDVW SP VS SG KY+V F D ++R TWLY M+HK EV   F+NF
Sbjct: 549 SRGLRSILPFMLIHSDVWTSPVVSMSGMKYFVTFIDCYSRMTWLYLMRHKDEVLKCFQNF 608

Query: 200 LAYIKTQFSSNLQNFQSDGGGEFDNGNFKTLCSTHGIHHRFSCPHTPEQNGLAERKHRHI 21
            AYIK  F++ +Q  ++D GGE+ N  F    S  GI H+ SCP TP QNG+AERK+RH+
Sbjct: 609 YAYIKNHFNARVQFIRTDNGGEYMNSEFGHFLSLEGILHQTSCPDTPPQNGVAERKNRHL 668

Query: 20  ADMART 3
            ++AR+
Sbjct: 669 LEIARS 674


>emb|CAN68274.1| hypothetical protein VITISV_032833 [Vitis vinifera]
          Length = 715

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/135 (51%), Positives = 91/135 (67%)
 Frame = -2

Query: 407 KSTHLPFSSSNEISTVSPFTLVHSDVWQSPTVSHSGYKYYVLFTDDFTRFTWLYFMKHKS 228
           K   LPFS+S+  ST +P  L+HSDVW + T S SG  YYV+F D+FTRF WLY + +KS
Sbjct: 52  KFKQLPFSTSSREST-APLELIHSDVWSTSTPSLSGCLYYVIFIDEFTRFCWLYPISNKS 110

Query: 227 EVFSHFENFLAYIKTQFSSNLQNFQSDGGGEFDNGNFKTLCSTHGIHHRFSCPHTPEQNG 48
           +V++ F  F   ++ QF+  +   QSD GGE+ +  FK   S +GI HR SCPHT +QNG
Sbjct: 111 DVYATFVKFKILVEKQFNYPIXKLQSDNGGEYCSTIFKQFLSDNGIFHRLSCPHTSQQNG 170

Query: 47  LAERKHRHIADMART 3
           LAERKHRHI +M  T
Sbjct: 171 LAERKHRHIVEMGLT 185


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/133 (48%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
 Frame = -2

Query: 407 KSTHLPFSSSNEISTVSPFTLVHSDVW-QSPTVSHSGYKYYVLFTDDFTRFTWLYFMKHK 231
           KS+ LPF  S+    + P   +H D+W  SP VS+ G KYY +F DD++R++W Y + +K
Sbjct: 495 KSSRLPFLISDS-RVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPLHNK 553

Query: 230 SEVFSHFENFLAYIKTQFSSNLQNFQSDGGGEFDNGNFKTLCSTHGIHHRFSCPHTPEQN 51
           SE  S F +F   ++ Q ++ ++ FQSDGGGEF +   KT  S HGIHHR SCP+TP+QN
Sbjct: 554 SEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTPQQN 613

Query: 50  GLAERKHRHIADM 12
           GLAERKHRH+ ++
Sbjct: 614 GLAERKHRHLVEL 626