BLASTX nr result

ID: Coptis21_contig00008877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008877
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21205.3| unnamed protein product [Vitis vinifera]               62   2e-07
ref|XP_002323899.1| predicted protein [Populus trichocarpa] gi|2...    62   3e-07
ref|XP_002527612.1| conserved hypothetical protein [Ricinus comm...    58   4e-06

>emb|CBI21205.3| unnamed protein product [Vitis vinifera]
          Length = 659

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 31/48 (64%), Positives = 35/48 (72%), Gaps = 3/48 (6%)
 Frame = +2

Query: 488 KSTSDPVPDTLIKLMEYGDDDDDP---AEESQKSNVKPISAPKPFWAL 622
           KS SD VPDTL KLMEYG++DDDP    EES K+N     APKPFWA+
Sbjct: 612 KSKSDTVPDTLSKLMEYGEEDDDPDEAGEESCKNNSSVAVAPKPFWAV 659


>ref|XP_002323899.1| predicted protein [Populus trichocarpa] gi|222866901|gb|EEF04032.1|
           predicted protein [Populus trichocarpa]
          Length = 97

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 38/103 (36%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
 Frame = +2

Query: 323 IPPPKKLVHXXXXXXXXXXXXXXXXXXXXXXXXXXLELMSSTPFSEAGHSISNPTKSTSD 502
           +P PKKLVH                           +  SSTP +      +   K+ SD
Sbjct: 1   MPAPKKLVHPSSNGMPPPPPRAMPPPPPPP------KFTSSTPAARLQDKSNCWNKTMSD 54

Query: 503 PVPDTLIKLMEYGDDDDDP---AEESQKSNVKPISAPKPFWAL 622
            VPDTL+KLMEYG++DDDP   +EES       ++  KPFWAL
Sbjct: 55  AVPDTLVKLMEYGEEDDDPEDTSEESPNGKSSVVAVRKPFWAL 97


>ref|XP_002527612.1| conserved hypothetical protein [Ricinus communis]
           gi|223532986|gb|EEF34751.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 586

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
 Frame = +2

Query: 467 HSISNPTKSTSDPVPDTLIKLMEYGDDDDDP--AEESQKSNVKPISAPKPFWAL 622
           + +SN  KS  D VPDTL+KLMEYG++DDDP  +EE    N + ++  KPFWAL
Sbjct: 535 NGVSN--KSKYDTVPDTLVKLMEYGEEDDDPEESEEPDLGNSRVVADRKPFWAL 586


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