BLASTX nr result

ID: Coptis21_contig00008863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008863
         (918 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326694.1| predicted protein [Populus trichocarpa] gi|2...   123   7e-26
ref|XP_002329544.1| predicted protein [Populus trichocarpa] gi|2...   117   4e-24
ref|XP_002282724.1| PREDICTED: uncharacterized protein LOC100257...   114   4e-23
emb|CAN64280.1| hypothetical protein VITISV_036896 [Vitis vinifera]   114   4e-23
ref|XP_003517388.1| PREDICTED: uncharacterized protein LOC100797...   110   5e-22

>ref|XP_002326694.1| predicted protein [Populus trichocarpa] gi|222834016|gb|EEE72493.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  123 bits (308), Expect = 7e-26
 Identities = 73/157 (46%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
 Frame = -3

Query: 820 RRPCFEEDDVGLACITSKEAGSPNSNNTPFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 641
           RRPCF ++D GLA +   EAGS + N+ PFF                             
Sbjct: 7   RRPCFIDEDDGLASLADMEAGS-SGNHHPFFSRSLCYARRGSFRNLSSLVSSPRSAR--- 62

Query: 640 RFYDTKCREQQLPHFLEACFLCKKPLGENRDIFMYRGDTPFCSEECRXXXXXXXXXXXKN 461
            + D++  + Q PHFLEACFLCKK LG+NRDIFMYRGDTPFCSEECR           KN
Sbjct: 63  -YCDSRYEDHQ-PHFLEACFLCKKSLGDNRDIFMYRGDTPFCSEECRQEQIDIDEANEKN 120

Query: 460 LKFASSMKTIRQDKQTKS-PPNKSQNYHVRTSTVAAA 353
              +SSMK +R+  Q KS  P K+Q+Y  RT TVAAA
Sbjct: 121 WNLSSSMKALRKKDQKKSTSPTKAQDYPSRTGTVAAA 157


>ref|XP_002329544.1| predicted protein [Populus trichocarpa] gi|222870253|gb|EEF07384.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  117 bits (293), Expect = 4e-24
 Identities = 70/159 (44%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
 Frame = -3

Query: 829 KNMRRPCFEEDDVGLACITSKEAGSPNSNNTPFFXXXXXXXXXXXXXXXXXXXXXXXXXX 650
           ++ +RPCF E+D GLA +    AG  + N+ PFF                          
Sbjct: 4   QSSKRPCFIEEDDGLASLADMGAGF-SGNHHPFFSRSLCYARRCSFRNLSSLVPSPRSAR 62

Query: 649 XXXRFYDTKCREQQLPHFLEACFLCKKPLGENRDIFMYRGDTPFCSEECRXXXXXXXXXX 470
               F D++  + Q PHFLEACFLCKKPLG+NRDIFMYRGD PFCSEECR          
Sbjct: 63  ----FCDSRFDDHQ-PHFLEACFLCKKPLGDNRDIFMYRGDMPFCSEECRQEQIDIDEAK 117

Query: 469 XKNLKFASSMKTIRQDKQTKS-PPNKSQNYHVRTSTVAA 356
            KN   +SSMK +R++ Q KS  P K+Q+Y  R  TVAA
Sbjct: 118 EKNWNLSSSMKALRKNDQKKSTSPTKAQDYSSRAGTVAA 156


>ref|XP_002282724.1| PREDICTED: uncharacterized protein LOC100257499 [Vitis vinifera]
          Length = 157

 Score =  114 bits (284), Expect = 4e-23
 Identities = 57/95 (60%), Positives = 68/95 (71%)
 Frame = -3

Query: 637 FYDTKCREQQLPHFLEACFLCKKPLGENRDIFMYRGDTPFCSEECRXXXXXXXXXXXKNL 458
           FYD +  + Q PHFLEACFLC KPLG+NRDI+MYRGDTPFCSEECR           KN 
Sbjct: 65  FYDARFEDHQ-PHFLEACFLCNKPLGDNRDIYMYRGDTPFCSEECRQEQIEMDEATEKN- 122

Query: 457 KFASSMKTIRQDKQTKSPPNKSQNYHVRTSTVAAA 353
           +  SS+K  R++++T S P+KSQNY  RT TVAAA
Sbjct: 123 RSISSIKAFRKEQKTSSTPSKSQNYPFRTGTVAAA 157


>emb|CAN64280.1| hypothetical protein VITISV_036896 [Vitis vinifera]
          Length = 157

 Score =  114 bits (284), Expect = 4e-23
 Identities = 57/95 (60%), Positives = 68/95 (71%)
 Frame = -3

Query: 637 FYDTKCREQQLPHFLEACFLCKKPLGENRDIFMYRGDTPFCSEECRXXXXXXXXXXXKNL 458
           FYD +  + Q PHFLEACFLC KPLG+NRDI+MYRGDTPFCSEECR           KN 
Sbjct: 65  FYDARFEDHQ-PHFLEACFLCNKPLGDNRDIYMYRGDTPFCSEECRQEQIEMDEATEKN- 122

Query: 457 KFASSMKTIRQDKQTKSPPNKSQNYHVRTSTVAAA 353
           +  SS+K  R++++T S P+KSQNY  RT TVAAA
Sbjct: 123 RSISSIKAFRKEQKTSSTPSKSQNYPFRTGTVAAA 157


>ref|XP_003517388.1| PREDICTED: uncharacterized protein LOC100797178 [Glycine max]
          Length = 156

 Score =  110 bits (275), Expect = 5e-22
 Identities = 56/96 (58%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
 Frame = -3

Query: 637 FYDTKCREQQLPHFLEACFLCKKPLGENRDIFMYRGDTPFCSEECRXXXXXXXXXXXKNL 458
           FYD +  + Q PHFL+AC LCKKPLG+NRDIFMYRGDTPFCSEECR           KN 
Sbjct: 62  FYDARFEDHQ-PHFLQACSLCKKPLGDNRDIFMYRGDTPFCSEECRQEQIERDEAKEKNK 120

Query: 457 KFASSMKTIRQDKQTKS-PPNKSQNYHVRTSTVAAA 353
             +SSMK +R+ +Q  S  PNK+Q+Y  R  TVAAA
Sbjct: 121 NLSSSMKALRKKEQRNSVSPNKTQDYSFRAGTVAAA 156


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