BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008862
         (1385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus ...   324   3e-86
emb|CBI35119.3| unnamed protein product [Vitis vinifera]              318   2e-84
ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4...   318   2e-84
emb|CAN81127.1| hypothetical protein VITISV_005390 [Vitis vinifera]   318   2e-84
ref|XP_002299200.1| predicted protein [Populus trichocarpa] gi|2...   297   4e-78

>ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223548050|gb|EEF49542.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 310

 Score =  324 bits (831), Expect = 3e-86
 Identities = 169/282 (59%), Positives = 212/282 (75%), Gaps = 2/282 (0%)
 Frame = +3

Query: 108 MEVKVRTVRSLVNRLSSISERTQLDAICQLRLMTKHDPDSRSLIAESSALPILTETLYSP 287
           MEVK RT RSLV++LSS+SE+T+ +A+ +LRL+TKHDPDSR +IAE  A+P L ETLYS 
Sbjct: 1   MEVKRRTARSLVSKLSSVSEQTRSEALSELRLITKHDPDSRPIIAECGAIPYLAETLYSS 60

Query: 288 TQTAQENAVATLLNISISNRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXX- 464
           + TAQENA ATLLN+SIS RD LMSTRG+LDA                            
Sbjct: 61  SHTAQENAAATLLNLSISTRDSLMSTRGLLDALGHALSHHSTTTSPLAVQSSAATLHSLL 120

Query: 465 -VDSYRPIIGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVG 641
            VDSYRPIIG+KRDIVY+LI+I+K  NS PR++KD LKA+FG+ALYPLNR  +IDLG V 
Sbjct: 121 IVDSYRPIIGSKRDIVYSLIDIVKSPNSPPRSVKDALKAMFGIALYPLNRCTLIDLGAVA 180

Query: 642 PLFSLVVKDGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSMRARE 821
           PLFSLV+KDGR+GIVEDATAV+AQ+AGC ES   F + SG+G+L+DLLD  TGSS+R +E
Sbjct: 181 PLFSLVLKDGRVGIVEDATAVVAQIAGCEESEGEFARYSGVGILIDLLDLATGSSLRIKE 240

Query: 822 NAVSALLNMIRCGDEKIVEDVKEFGVEFLLESICDVAENGSS 947
           NAVSALLN++RCG E++  DV++     ++E I +VAENG+S
Sbjct: 241 NAVSALLNLVRCGGERVAADVRDMAA-IVVEGIKEVAENGTS 281


>emb|CBI35119.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  318 bits (816), Expect = 2e-84
 Identities = 167/279 (59%), Positives = 209/279 (74%)
 Frame = +3

Query: 108 MEVKVRTVRSLVNRLSSISERTQLDAICQLRLMTKHDPDSRSLIAESSALPILTETLYSP 287
           MEVK RT RSLV RLSS+S++T+ +A+C+LRL++KHDPDSR  IA++ A+P L ETLYS 
Sbjct: 1   MEVKRRTARSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSA 60

Query: 288 TQTAQENAVATLLNISISNRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXXV 467
               QENA ATLLN+SIS+R LLMSTRG+LDA                            
Sbjct: 61  LPLEQENAAATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSLLVD 120

Query: 468 DSYRPIIGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPL 647
           D YRPIIGAKRDIVYAL++II+  ++ PR+IKD LKALFG++LYPLNRA+M+ LG V  L
Sbjct: 121 DDYRPIIGAKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAAL 180

Query: 648 FSLVVKDGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSMRARENA 827
           F+L VKDGR+GIVEDATAVIAQ+AGC E G+AF+KVSGIG+LVDLLD  TGSS+R +ENA
Sbjct: 181 FTLAVKDGRVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGILVDLLDPSTGSSIRTKENA 240

Query: 828 VSALLNMIRCGDEKIVEDVKEFGVEFLLESICDVAENGS 944
           VSALLN+++CG E+I  D++E G+  L + I  VA+ GS
Sbjct: 241 VSALLNLVQCGGERIAGDMREAGMG-LYDGIAVVADGGS 278


>ref|XP_002264402.1| PREDICTED: U-box domain-containing protein 4 [Vitis vinifera]
          Length = 309

 Score =  318 bits (816), Expect = 2e-84
 Identities = 167/279 (59%), Positives = 209/279 (74%)
 Frame = +3

Query: 108 MEVKVRTVRSLVNRLSSISERTQLDAICQLRLMTKHDPDSRSLIAESSALPILTETLYSP 287
           MEVK RT RSLV RLSS+S++T+ +A+C+LRL++KHDPDSR  IA++ A+P L ETLYS 
Sbjct: 1   MEVKRRTARSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSA 60

Query: 288 TQTAQENAVATLLNISISNRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXXV 467
               QENA ATLLN+SIS+R LLMSTRG+LDA                            
Sbjct: 61  LPLEQENAAATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSLLVD 120

Query: 468 DSYRPIIGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPL 647
           D YRPIIGAKRDIVYAL++II+  ++ PR+IKD LKALFG++LYPLNRA+M+ LG V  L
Sbjct: 121 DDYRPIIGAKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAAL 180

Query: 648 FSLVVKDGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSMRARENA 827
           F+L VKDGR+GIVEDATAVIAQ+AGC E G+AF+KVSGIG+LVDLLD  TGSS+R +ENA
Sbjct: 181 FTLAVKDGRVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGILVDLLDPSTGSSIRTKENA 240

Query: 828 VSALLNMIRCGDEKIVEDVKEFGVEFLLESICDVAENGS 944
           VSALLN+++CG E+I  D++E G+  L + I  VA+ GS
Sbjct: 241 VSALLNLVQCGGERIAGDMREAGMG-LYDGIAVVADGGS 278


>emb|CAN81127.1| hypothetical protein VITISV_005390 [Vitis vinifera]
          Length = 309

 Score =  318 bits (816), Expect = 2e-84
 Identities = 169/279 (60%), Positives = 208/279 (74%)
 Frame = +3

Query: 108 MEVKVRTVRSLVNRLSSISERTQLDAICQLRLMTKHDPDSRSLIAESSALPILTETLYSP 287
           MEVK RT RSLV RLSS+S++T+ +A+C+LRL++KHDPDSR  IA++ A+P L ETLYS 
Sbjct: 1   MEVKRRTARSLVARLSSVSQQTRTEALCELRLISKHDPDSRCFIADAGAVPYLCETLYSA 60

Query: 288 TQTAQENAVATLLNISISNRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXXV 467
               QENA ATLLN+SIS+R LLMSTRG+LDA                            
Sbjct: 61  LPLEQENAAATLLNLSISSRQLLMSTRGLLDALSHALRSPSSSPAAIQACAATLYSLLVD 120

Query: 468 DSYRPIIGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVGPL 647
           D YRPIIGAKRDIVYAL++II+  ++ PR+IKD LKALFG++LYPLNRA+M+ LG V  L
Sbjct: 121 DDYRPIIGAKRDIVYALVDIIRTPHAPPRSIKDALKALFGISLYPLNRASMVGLGAVAAL 180

Query: 648 FSLVVKDGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSMRARENA 827
           FSL VKDGR+GIVEDATAVIAQ+AGC E G+AF+KVSGIGVLVDLLD  TGSS+R +ENA
Sbjct: 181 FSLAVKDGRVGIVEDATAVIAQIAGCEEGGDAFRKVSGIGVLVDLLDPSTGSSIRTKENA 240

Query: 828 VSALLNMIRCGDEKIVEDVKEFGVEFLLESICDVAENGS 944
           VSALLN+ +CG E+I  D++E G+  L + I  VA+ GS
Sbjct: 241 VSALLNLAQCGGERIAGDMREAGMG-LYDGIAVVADGGS 278


>ref|XP_002299200.1| predicted protein [Populus trichocarpa] gi|222846458|gb|EEE84005.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  297 bits (761), Expect = 4e-78
 Identities = 166/282 (58%), Positives = 202/282 (71%), Gaps = 2/282 (0%)
 Frame = +3

Query: 108 MEVKVRTVRSLVNRLSSISERTQLDAICQLRLMTKHDPDSRSLIAESSALPILTETLYSP 287
           MEVK RT R LV RL S+SE+T+ +A+ +LRLMTK+D +SR +IAE+ A+P L ETLYS 
Sbjct: 1   MEVKRRTARLLVTRLGSVSEQTRSEALAELRLMTKNDAESRPIIAEAGAIPYLEETLYSS 60

Query: 288 TQTAQENAVATLLNISISNRDLLMSTRGILDAXXXXXXXXXXXXXXXXXXXXXXXXXXXV 467
           +  +Q+NA A LLNISIS+R  LMSTRG+LDA                           +
Sbjct: 61  SHDSQDNAAAILLNISISSRTALMSTRGLLDAISHVLRHHATNSSPFAVQSSAATLHSLL 120

Query: 468 --DSYRPIIGAKRDIVYALIEIIKCQNSVPRTIKDGLKALFGVALYPLNRANMIDLGIVG 641
             DSYRP+IGAKRDIVY+LIEIIK  NS PR++KD LKALFG+AL+PLNRAN+I LG V 
Sbjct: 121 VDDSYRPVIGAKRDIVYSLIEIIKRPNSPPRSVKDALKALFGIALFPLNRANLIGLGGVA 180

Query: 642 PLFSLVVKDGRLGIVEDATAVIAQVAGCYESGEAFKKVSGIGVLVDLLDKETGSSMRARE 821
            LFSLV+KDGR+GIVEDATAVIAQ+AGC ES   F KVSG+ VLVDLLD  TGSS R +E
Sbjct: 181 ALFSLVLKDGRVGIVEDATAVIAQIAGCAESEREFWKVSGVKVLVDLLDVGTGSSERVKE 240

Query: 822 NAVSALLNMIRCGDEKIVEDVKEFGVEFLLESICDVAENGSS 947
           NAV ALLN++ CG   +V+ VKE G    +E I DV ENG++
Sbjct: 241 NAVGALLNLVSCGGGGVVKQVKEMG-PGAVEGIRDVVENGTA 281