BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008857
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis ...   114   2e-23
gb|ADO00336.1| F-box protein [Elaeis guineensis]                      114   2e-23
ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vit...   113   4e-23
ref|XP_002305655.1| f-box family protein [Populus trichocarpa] g...   108   9e-22
ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21

>ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis vinifera]
          Length = 172

 Score =  114 bits (285), Expect = 2e-23
 Identities = 70/163 (42%), Positives = 98/163 (60%), Gaps = 22/163 (13%)
 Frame = -2

Query: 465 RGATEEFDIEYVKQAREIRRKRVMVS-----------LKTPSKMKNGGKFVFNS--SIFD 325
           +G  EE  + +    R + RKR++VS           L+TP K + G      +  S+ +
Sbjct: 12  KGGDEELGLGFAPVTRSLSRKRILVSSNTESSSPSSVLRTPLKRRCGEMVEEKAEKSMLE 71

Query: 324 SLPQDILIRILCCVDHGDLKQLFKVSKTVKEAALIAKRDHFAYSTPSK--TVFGDMEIED 151
           ++PQDILIRILC VDH DLKQLF VS T+++A LIAK+ HFAYSTPSK  T    ++ E+
Sbjct: 72  AMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHFAYSTPSKVQTFRSPLDPEE 131

Query: 150 -------EAPNAPKQDRKNYRKSRIDGKKLGDITVALFHSPEK 43
                  + P+APKQ R  + +SR+ G+KL  I +ALF S E+
Sbjct: 132 SSGFDDLQTPDAPKQSR--HFRSRLRGRKLSGIAIALFSSDEE 172


>gb|ADO00336.1| F-box protein [Elaeis guineensis]
          Length = 178

 Score =  114 bits (284), Expect = 2e-23
 Identities = 74/160 (46%), Positives = 96/160 (60%), Gaps = 21/160 (13%)
 Frame = -2

Query: 441 IEYVKQAREIRRKRVMVS-----------LKTPSKMKNGGK-FVFNSSIFDSLPQDILIR 298
           +++V  +  + RKRV++S           L  P + + G + FV  S+  +SLPQD+L+R
Sbjct: 16  LKFVPGSCILGRKRVVISDSLDSSNSSSPLSGPLQKRRGARSFVERSNCLESLPQDVLVR 75

Query: 297 ILCCVDHGDLKQLFKVSKTVKEAALIAKRDHFAYSTP-SKTVFG--------DMEIEDEA 145
           ILC V+H DLKQL  VSK V  A LIAK  HFA+STP SK  F         D+E+ +EA
Sbjct: 76  ILCKVNHSDLKQLILVSKIVHGATLIAKEMHFAFSTPSSKPTFRREGNMGDIDLEVSEEA 135

Query: 144 PNAPKQDRKNYRKSRIDGKKLGDITVALFHSPEKQQWRRN 25
           PNAPKQ R    KSR+ GK L  I VALF SPE  +W +N
Sbjct: 136 PNAPKQRR--VAKSRLGGKTLSSIAVALFTSPE-DKWPKN 172


>ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vitis vinifera]
          Length = 172

 Score =  113 bits (282), Expect = 4e-23
 Identities = 69/163 (42%), Positives = 99/163 (60%), Gaps = 22/163 (13%)
 Frame = -2

Query: 465 RGATEEFDIEYVKQAREIRRKRVMVS-----------LKTPSKMKNGGKFVFNS--SIFD 325
           +G  EE  + +V   R + RKR++VS           L+TP K + G      +  S+ +
Sbjct: 12  KGGDEELGLGFVPVTRSLSRKRILVSSNTESSSPSSVLRTPLKRRCGEMVEEKAEKSMLE 71

Query: 324 SLPQDILIRILCCVDHGDLKQLFKVSKTVKEAALIAKRDHFAYSTPSK--TVFGDMEIED 151
           ++PQDILIRILC VDH DLKQLF VS T+++A LIAK+ HFA+STPSK  T    ++ E+
Sbjct: 72  AMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHFAFSTPSKVQTFRSPLDPEE 131

Query: 150 -------EAPNAPKQDRKNYRKSRIDGKKLGDITVALFHSPEK 43
                  + P+APKQ R  + +SR+ G++L  I +ALF S E+
Sbjct: 132 SSGFDDLQTPDAPKQSR--HFRSRLRGRRLSGIAIALFSSDEE 172


>ref|XP_002305655.1| f-box family protein [Populus trichocarpa]
           gi|222848619|gb|EEE86166.1| f-box family protein
           [Populus trichocarpa]
          Length = 189

 Score =  108 bits (270), Expect = 9e-22
 Identities = 62/108 (57%), Positives = 78/108 (72%), Gaps = 10/108 (9%)
 Frame = -2

Query: 336 SIFDSLPQDILIRILCCVDHGDLKQLFKVSKTVKEAALIAKRDHFAYSTPSKTVF----- 172
           S  +SLPQDILIR+LC VDH DLKQLF VSK ++EA LIAK  HFAYSTP K+       
Sbjct: 77  SNLESLPQDILIRVLCRVDHDDLKQLFHVSKVIREATLIAKESHFAYSTPRKSQGFRSPF 136

Query: 171 -----GDMEIEDEAPNAPKQDRKNYRKSRIDGKKLGDITVALFHSPEK 43
                G+++ E EAPNAPKQ R++Y KSR++ K + D++VALF SP+K
Sbjct: 137 DLENPGELD-EIEAPNAPKQ-RRSY-KSRLNRKSIADVSVALFASPKK 181


>ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|222859725|gb|EEE97272.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  107 bits (267), Expect = 2e-21
 Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 11/156 (7%)
 Frame = -2

Query: 477 LGVKRGATEEFDIEYVKQAREIRRKRVMVSLKTP--SKMKNGGKFVFNSSIFDSLPQDIL 304
           LG+K   +  F  + V  +  I     +++L +   S +K         S  +SLPQDIL
Sbjct: 28  LGLKFVRSYSFGRKRVLSSNNILNDEDLLNLDSTFISSLKRLRSLKPEKSNLESLPQDIL 87

Query: 303 IRILCCVDHGDLKQLFKVSKTVKEAALIAKRDHFAYSTPSKTV-------FGDME--IED 151
           IR+LC VDH DLKQLF VSK ++EA LIAK  HFAYSTP KT        FG+     E 
Sbjct: 88  IRVLCGVDHDDLKQLFHVSKVIREATLIAKEWHFAYSTPRKTQAFRTRIDFGNPSGLDEI 147

Query: 150 EAPNAPKQDRKNYRKSRIDGKKLGDITVALFHSPEK 43
           EAPNAPKQ R++Y KS ++ K + D++VALF SP+K
Sbjct: 148 EAPNAPKQ-RRSY-KSLLNRKSIADVSVALFASPKK 181