BLASTX nr result

ID: Coptis21_contig00008830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008830
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275561.2| PREDICTED: actin-related protein 4-like [Vit...   192   2e-46
ref|XP_003521054.1| PREDICTED: actin-related protein 4-like [Gly...   192   2e-46
emb|CBI15426.3| unnamed protein product [Vitis vinifera]              192   2e-46
ref|XP_003529017.1| PREDICTED: actin-related protein 4-like [Gly...   191   3e-46
ref|XP_003615307.1| Actin-related protein [Medicago truncatula] ...   191   3e-46

>ref|XP_002275561.2| PREDICTED: actin-related protein 4-like [Vitis vinifera]
          Length = 444

 Score =  192 bits (487), Expect = 2e-46
 Identities = 97/117 (82%), Positives = 102/117 (87%)
 Frame = -3

Query: 1056 EGFADSASSIRGLPQMVIESINKCDVDIRRELFSSILLSGGTASMQQXXXXXXXXXXXES 877
            E FAD A S+RGLPQMVIESINKCDVDIRRELFSSILL+GGTASMQQ           ES
Sbjct: 328  ESFADIAPSVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEES 387

Query: 876  PQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGSSYVQRKCP 706
            PQ ARVKVLASGN+TERRFSVWIGGSILASLGSFQQMWFSKAEYEEHG+SY+QRKCP
Sbjct: 388  PQTARVKVLASGNSTERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGASYIQRKCP 444


>ref|XP_003521054.1| PREDICTED: actin-related protein 4-like [Glycine max]
          Length = 445

 Score =  192 bits (487), Expect = 2e-46
 Identities = 97/117 (82%), Positives = 103/117 (88%)
 Frame = -3

Query: 1056 EGFADSASSIRGLPQMVIESINKCDVDIRRELFSSILLSGGTASMQQXXXXXXXXXXXES 877
            E FA+ A S+RGLPQMVIESINKCDVDIRRELFSSILL+GGTASMQQ           ES
Sbjct: 329  ESFAEIAPSVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEES 388

Query: 876  PQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGSSYVQRKCP 706
            PQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSK+EYEEHG+SY+QRKCP
Sbjct: 389  PQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP 445


>emb|CBI15426.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  192 bits (487), Expect = 2e-46
 Identities = 97/117 (82%), Positives = 102/117 (87%)
 Frame = -3

Query: 1056 EGFADSASSIRGLPQMVIESINKCDVDIRRELFSSILLSGGTASMQQXXXXXXXXXXXES 877
            E FAD A S+RGLPQMVIESINKCDVDIRRELFSSILL+GGTASMQQ           ES
Sbjct: 326  ESFADIAPSVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEES 385

Query: 876  PQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGSSYVQRKCP 706
            PQ ARVKVLASGN+TERRFSVWIGGSILASLGSFQQMWFSKAEYEEHG+SY+QRKCP
Sbjct: 386  PQTARVKVLASGNSTERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGASYIQRKCP 442


>ref|XP_003529017.1| PREDICTED: actin-related protein 4-like [Glycine max]
          Length = 446

 Score =  191 bits (484), Expect = 3e-46
 Identities = 96/117 (82%), Positives = 103/117 (88%)
 Frame = -3

Query: 1056 EGFADSASSIRGLPQMVIESINKCDVDIRRELFSSILLSGGTASMQQXXXXXXXXXXXES 877
            E FA+ A S+RGLPQMVIESINKCDVDIRRELF+SILL+GGTASMQQ           ES
Sbjct: 330  ESFAEIAPSVRGLPQMVIESINKCDVDIRRELFNSILLAGGTASMQQLKERLEKDLLEES 389

Query: 876  PQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGSSYVQRKCP 706
            PQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSK+EYEEHG+SY+QRKCP
Sbjct: 390  PQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP 446


>ref|XP_003615307.1| Actin-related protein [Medicago truncatula]
            gi|355516642|gb|AES98265.1| Actin-related protein
            [Medicago truncatula]
          Length = 445

 Score =  191 bits (484), Expect = 3e-46
 Identities = 96/117 (82%), Positives = 103/117 (88%)
 Frame = -3

Query: 1056 EGFADSASSIRGLPQMVIESINKCDVDIRRELFSSILLSGGTASMQQXXXXXXXXXXXES 877
            E FA+ A S+RGLPQMVI+SINKCDVDIRRELFSSILL+GGTASMQQ           ES
Sbjct: 329  ESFAEIAPSVRGLPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEES 388

Query: 876  PQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKAEYEEHGSSYVQRKCP 706
            PQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSK+EYEEHG+SY+QRKCP
Sbjct: 389  PQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP 445


Top