BLASTX nr result

ID: Coptis21_contig00008825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008825
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269681.2| PREDICTED: transcription factor GTE9-like [V...    99   5e-19
emb|CBI30776.3| unnamed protein product [Vitis vinifera]               99   5e-19
emb|CAN72911.1| hypothetical protein VITISV_007433 [Vitis vinifera]    99   5e-19
ref|XP_004134581.1| PREDICTED: transcription factor GTE11-like [...    97   2e-18
ref|XP_002317311.1| global transcription factor group [Populus t...    95   5e-18

>ref|XP_002269681.2| PREDICTED: transcription factor GTE9-like [Vitis vinifera]
          Length = 588

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 64/133 (48%), Positives = 78/133 (58%), Gaps = 6/133 (4%)
 Frame = +1

Query: 1   LEKQQRDEKARIEAQMRVAEAASRMKEEMDLKIQREKEREAARIALQKMERTVQXXXXXX 180
           LEK+Q +EK R+EAQ+R AEAASRMK E + K+QREKEREAAR+ALQKM RTV+      
Sbjct: 461 LEKKQLEEKGRLEAQVRAAEAASRMKAETESKLQREKEREAARVALQKMARTVE------ 514

Query: 181 XXXXXXXXXXXXXXMERTVQIDENLEILKDLELLGGY-----SPVDCLDHN-GNPLARLG 342
                          E  VQI + LE L    L   Y     S V     N GNPL RLG
Sbjct: 515 --------------FENNVQIVKELEKLSGCVLTYQYYRQRDSKVQLRAFNFGNPLERLG 560

Query: 343 LFMKDEYLEDEEE 381
           L++KD++  DE+E
Sbjct: 561 LYIKDDFFVDEDE 573


>emb|CBI30776.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 64/133 (48%), Positives = 78/133 (58%), Gaps = 6/133 (4%)
 Frame = +1

Query: 1   LEKQQRDEKARIEAQMRVAEAASRMKEEMDLKIQREKEREAARIALQKMERTVQXXXXXX 180
           LEK+Q +EK R+EAQ+R AEAASRMK E + K+QREKEREAAR+ALQKM RTV+      
Sbjct: 446 LEKKQLEEKGRLEAQVRAAEAASRMKAETESKLQREKEREAARVALQKMARTVE------ 499

Query: 181 XXXXXXXXXXXXXXMERTVQIDENLEILKDLELLGGY-----SPVDCLDHN-GNPLARLG 342
                          E  VQI + LE L    L   Y     S V     N GNPL RLG
Sbjct: 500 --------------FENNVQIVKELEKLSGCVLTYQYYRQRDSKVQLRAFNFGNPLERLG 545

Query: 343 LFMKDEYLEDEEE 381
           L++KD++  DE+E
Sbjct: 546 LYIKDDFFVDEDE 558


>emb|CAN72911.1| hypothetical protein VITISV_007433 [Vitis vinifera]
          Length = 588

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 64/133 (48%), Positives = 78/133 (58%), Gaps = 6/133 (4%)
 Frame = +1

Query: 1   LEKQQRDEKARIEAQMRVAEAASRMKEEMDLKIQREKEREAARIALQKMERTVQXXXXXX 180
           LEK+Q +EK R+EAQ+R AEAASRMK E + K+QREKEREAAR+ALQKM RTV+      
Sbjct: 461 LEKKQLEEKGRLEAQVRAAEAASRMKAETESKLQREKEREAARVALQKMARTVE------ 514

Query: 181 XXXXXXXXXXXXXXMERTVQIDENLEILKDLELLGGY-----SPVDCLDHN-GNPLARLG 342
                          E  VQI + LE L    L   Y     S V     N GNPL RLG
Sbjct: 515 --------------FENNVQIVKELEKLSGCVLTYQYYRQRDSKVQLRAFNFGNPLERLG 560

Query: 343 LFMKDEYLEDEEE 381
           L++KD++  DE+E
Sbjct: 561 LYIKDDFFVDEDE 573


>ref|XP_004134581.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
           gi|449523269|ref|XP_004168646.1| PREDICTED:
           transcription factor GTE11-like [Cucumis sativus]
          Length = 569

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 63/140 (45%), Positives = 83/140 (59%), Gaps = 13/140 (9%)
 Frame = +1

Query: 1   LEKQQRDEKARIEAQMRVAEAASRMKEEMDLKIQREKEREAARIALQKMERTVQXXXXXX 180
           LE++QR+E+ RIEAQ++ A+ A R+K E + K QRE++REAARIALQK            
Sbjct: 442 LERKQREERERIEAQIKAADMALRLKAEAEKKQQRERDREAARIALQK------------ 489

Query: 181 XXXXXXXXXXXXXXMERTVQIDENLEILKDLE-LLGGY------------SPVDCLDHNG 321
                         +ERTV +D+NLEILK+LE L GG+            S  DC     
Sbjct: 490 --------------IERTVDLDQNLEILKELEKLCGGFLFIQHHRAMVKRSLDDC--QLE 533

Query: 322 NPLARLGLFMKDEYLEDEEE 381
           NPL RLGLF+KDE+L+D+EE
Sbjct: 534 NPLERLGLFIKDEFLDDDEE 553


>ref|XP_002317311.1| global transcription factor group [Populus trichocarpa]
           gi|222860376|gb|EEE97923.1| global transcription factor
           group [Populus trichocarpa]
          Length = 567

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 63/142 (44%), Positives = 86/142 (60%), Gaps = 16/142 (11%)
 Frame = +1

Query: 1   LEKQQRDEKARIEAQMRVAEAASRMKEEMDLKIQREKEREAARIALQKMERTVQXXXXXX 180
           LE++QR+EK+ IEAQ+R AEAASR +EEM+LK+QRE+EREAARIALQK            
Sbjct: 437 LERRQREEKSWIEAQIRAAEAASRRREEMELKMQREREREAARIALQK------------ 484

Query: 181 XXXXXXXXXXXXXXMERTVQIDENLEILKDLELLGGYS----------PVDCLDHN---- 318
                         ME+TV+I++NL+I ++LE L G S           ++ +       
Sbjct: 485 --------------MEKTVEIEQNLDIQRELERLCGCSISFDFRFGSGKMEVVKKGEIGA 530

Query: 319 --GNPLARLGLFMKDEYLEDEE 378
             G+PL RLGLFMKD+ +EDE+
Sbjct: 531 CIGSPLERLGLFMKDD-IEDED 551


Top