BLASTX nr result

ID: Coptis21_contig00008807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008807
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling co...   171   8e-41
ref|XP_003609906.1| Chromatin structure-remodeling complex prote...   169   3e-40
gb|ABF85669.1| SNF5 [Pisum sativum]                                   169   3e-40
ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling co...   167   8e-40
ref|NP_566581.1| chromatin structure-remodeling complex protein ...   166   2e-39

>ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling complex protein BSH-like
           [Cucumis sativus] gi|449498785|ref|XP_004160633.1|
           PREDICTED: chromatin structure-remodeling complex
           protein BSH-like [Cucumis sativus]
          Length = 240

 Score =  171 bits (432), Expect = 8e-41
 Identities = 77/101 (76%), Positives = 96/101 (95%)
 Frame = +1

Query: 1   SQVTEFRSYEGQEMYSGDRIVPLKLDLRVNNTIVRDQFLWDLNNYESDPEEFARTFCRDL 180
           SQ+TEFRS+EGQ+MY+G++I+P+KLDLRVNNT+++DQFLWDLNNYESDPEEF+RT C+DL
Sbjct: 79  SQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDL 138

Query: 181 EIVDPEVGPAVAVAIREQLYEIVIQSVASAREFRVNKKGRQ 303
            I DPEVGPA+AVAIREQLYEI +Q+VASARE R++KKGR+
Sbjct: 139 GIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRR 179


>ref|XP_003609906.1| Chromatin structure-remodeling complex protein BSH [Medicago
           truncatula] gi|355510961|gb|AES92103.1| Chromatin
           structure-remodeling complex protein BSH [Medicago
           truncatula]
          Length = 240

 Score =  169 bits (427), Expect = 3e-40
 Identities = 77/101 (76%), Positives = 95/101 (94%)
 Frame = +1

Query: 1   SQVTEFRSYEGQEMYSGDRIVPLKLDLRVNNTIVRDQFLWDLNNYESDPEEFARTFCRDL 180
           SQ+ EFRSY+GQ+MY+G++IVP+KLDLRVN+T+V+DQFLWDLNN++SDPEEFARTFCRD+
Sbjct: 79  SQLAEFRSYDGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDLNNFDSDPEEFARTFCRDM 138

Query: 181 EIVDPEVGPAVAVAIREQLYEIVIQSVASAREFRVNKKGRQ 303
            I DPEVGPA+A AIREQLYEIV+QSV SARE R++KKGR+
Sbjct: 139 GIEDPEVGPAIAFAIREQLYEIVVQSVVSARESRLSKKGRR 179


>gb|ABF85669.1| SNF5 [Pisum sativum]
          Length = 240

 Score =  169 bits (427), Expect = 3e-40
 Identities = 78/101 (77%), Positives = 94/101 (93%)
 Frame = +1

Query: 1   SQVTEFRSYEGQEMYSGDRIVPLKLDLRVNNTIVRDQFLWDLNNYESDPEEFARTFCRDL 180
           SQ+ EFRSYEGQ+MY+G++I+P+KLDLRVN+T+V+DQFLWDLNN++SDPEEFARTFCRD+
Sbjct: 79  SQLAEFRSYEGQDMYAGEKIIPIKLDLRVNHTLVKDQFLWDLNNFDSDPEEFARTFCRDM 138

Query: 181 EIVDPEVGPAVAVAIREQLYEIVIQSVASAREFRVNKKGRQ 303
            I DPEVGPAVA AIREQLYEI IQSV SARE R++KKGR+
Sbjct: 139 GIEDPEVGPAVAFAIREQLYEIAIQSVVSARESRLSKKGRR 179


>ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling complex protein BSH
           [Vitis vinifera] gi|297736833|emb|CBI26034.3| unnamed
           protein product [Vitis vinifera]
          Length = 243

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/108 (72%), Positives = 97/108 (89%), Gaps = 3/108 (2%)
 Frame = +1

Query: 1   SQVTEFRSYEGQEMYSGDRIVPLKLDLRVNNTIVRDQFLWDLNNYESDPEEFARTFCRDL 180
           SQ+ EFRS+EGQ+M +G++IVP+KLDLRVN+T+++DQFLWDLNN+ESDPEEFARTFC+DL
Sbjct: 79  SQLAEFRSFEGQDMQTGEKIVPIKLDLRVNHTLIKDQFLWDLNNFESDPEEFARTFCKDL 138

Query: 181 EIVDPEVGPAVAVAIREQLYEIVIQSVASAREFRVNKKGR---QHVSA 315
            + DPEVGPA+AVAIREQLYEI IQSV SARE R++KKGR   +H+ A
Sbjct: 139 GVEDPEVGPAIAVAIREQLYEIAIQSVTSARETRISKKGRRGAEHIPA 186


>ref|NP_566581.1| chromatin structure-remodeling complex protein BSH [Arabidopsis
           thaliana] gi|71152345|sp|P93045.2|BSH_ARATH RecName:
           Full=Chromatin structure-remodeling complex protein BSH;
           Short=AtBSH; AltName: Full=Protein BUSHY; AltName:
           Full=SNF5 homolog gi|9294147|dbj|BAB02049.1| SNF5,
           transcription regulatory protein homolog BSH
           [Arabidopsis thaliana] gi|26449426|dbj|BAC41840.1|
           unknown protein [Arabidopsis thaliana]
           gi|88196751|gb|ABD43018.1| At3g17590 [Arabidopsis
           thaliana] gi|332642450|gb|AEE75971.1| chromatin
           structure-remodeling complex protein BSH [Arabidopsis
           thaliana]
          Length = 240

 Score =  166 bits (420), Expect = 2e-39
 Identities = 75/101 (74%), Positives = 95/101 (94%)
 Frame = +1

Query: 1   SQVTEFRSYEGQEMYSGDRIVPLKLDLRVNNTIVRDQFLWDLNNYESDPEEFARTFCRDL 180
           SQ+++FR+YEGQ+MY+G++I+P+KLDLRVN+T+++DQFLWDLNN+ESDPEEFART C+DL
Sbjct: 79  SQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDLNNFESDPEEFARTLCKDL 138

Query: 181 EIVDPEVGPAVAVAIREQLYEIVIQSVASAREFRVNKKGRQ 303
            + DPEVGPAVA AIREQLYEI IQSVASARE R++KKGR+
Sbjct: 139 GVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGRR 179


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