BLASTX nr result

ID: Coptis21_contig00008803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008803
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871866.1| hypothetical protein ARALYDRAFT_351018 [Arab...    68   2e-09
ref|NP_197417.1| protein trichome birefringence-like 11 [Arabido...    67   5e-09
ref|XP_003547244.1| PREDICTED: uncharacterized protein LOC100789...    65   2e-08
ref|NP_974235.1| uncharacterized protein [Arabidopsis thaliana] ...    65   3e-08
ref|XP_002884558.1| hypothetical protein ARALYDRAFT_896718 [Arab...    65   3e-08

>ref|XP_002871866.1| hypothetical protein ARALYDRAFT_351018 [Arabidopsis lyrata subsp.
           lyrata] gi|297317703|gb|EFH48125.1| hypothetical protein
           ARALYDRAFT_351018 [Arabidopsis lyrata subsp. lyrata]
          Length = 464

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
 Frame = -3

Query: 197 KWGVFENGGEGCDLFKGKWV*NETNALYREREIVCVWMKV---LGVLRMVDLFYTKWRWQ 27
           K G  E  G GCDLF GKWV +E+  LY+ ++  C ++           +DLFYTKWRWQ
Sbjct: 88  KVGFLEESGNGCDLFDGKWVWDESYPLYQSKD--CTFLDEGFRCTEFGRLDLFYTKWRWQ 145

Query: 26  PKYCNLPR 3
           P +C+LPR
Sbjct: 146 PNHCDLPR 153


>ref|NP_197417.1| protein trichome birefringence-like 11 [Arabidopsis thaliana]
           gi|60547899|gb|AAX23913.1| hypothetical protein
           At5g19160 [Arabidopsis thaliana]
           gi|71905561|gb|AAZ52758.1| expressed protein
           [Arabidopsis thaliana] gi|71905563|gb|AAZ52759.1|
           expressed protein [Arabidopsis thaliana]
           gi|332005280|gb|AED92663.1| protein trichome
           birefringence-like 11 [Arabidopsis thaliana]
          Length = 464

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 32/68 (47%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
 Frame = -3

Query: 197 KWGVFENGGEGCDLFKGKWV*NETNALYREREIVCVWMKV---LGVLRMVDLFYTKWRWQ 27
           K G  E  G GCDLF GKWV +E+  LY+ ++  C ++            DLFYTKWRWQ
Sbjct: 88  KVGFLEESGNGCDLFNGKWVWDESYPLYQSKD--CTFIDEGFRCTEFGRPDLFYTKWRWQ 145

Query: 26  PKYCNLPR 3
           P +C+LPR
Sbjct: 146 PNHCDLPR 153


>ref|XP_003547244.1| PREDICTED: uncharacterized protein LOC100789071 [Glycine max]
          Length = 439

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
 Frame = -3

Query: 218 KKVWLFKKWGVFENGGEGCDLFKGKWV*NETNALYREREIVCVWMKVLGVLRMV-----D 54
           K+V   +  G    GG GCDLF+G WV +E+  LY+ ++  C ++   G  R       D
Sbjct: 69  KRVHRVEFLGEKGGGGGGCDLFEGNWVWDESYPLYQSKD--CSFLD--GGFRCSENGRPD 124

Query: 53  LFYTKWRWQPKYCNLPR 3
           LFYTKWRWQPK CNLPR
Sbjct: 125 LFYTKWRWQPKACNLPR 141


>ref|NP_974235.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6862912|gb|AAF30301.1|AC018907_1 unknown protein
           [Arabidopsis thaliana] gi|7658346|gb|AAF66136.1| unknown
           protein; 23105-20540 [Arabidopsis thaliana]
           gi|332640820|gb|AEE74341.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 469

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = -3

Query: 200 KKWGVFENGGEGCDLFKGKWV*NETNALYREREIVCVWMKV---LGVLRMVDLFYTKWRW 30
           K+ G  E  G GCD+F G WV +E+  LY+ ++  C ++            DLFYT+WRW
Sbjct: 91  KRVGFLEESGSGCDVFDGDWVWDESYPLYQSKD--CRFLDEGFRCSDFGRSDLFYTQWRW 148

Query: 29  QPKYCNLPR 3
           QP++CNLPR
Sbjct: 149 QPRHCNLPR 157


>ref|XP_002884558.1| hypothetical protein ARALYDRAFT_896718 [Arabidopsis lyrata subsp.
           lyrata] gi|297330398|gb|EFH60817.1| hypothetical protein
           ARALYDRAFT_896718 [Arabidopsis lyrata subsp. lyrata]
          Length = 465

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = -3

Query: 200 KKWGVFENGGEGCDLFKGKWV*NETNALYREREIVCVWMKV---LGVLRMVDLFYTKWRW 30
           K+ G  E  G GCD+F G WV +E+  LY+ ++  C ++            DLFYT+WRW
Sbjct: 90  KRVGFLEESGNGCDVFDGDWVWDESYPLYQSKD--CRFLDEGFRCSDFGRSDLFYTQWRW 147

Query: 29  QPKYCNLPR 3
           QP++CNLPR
Sbjct: 148 QPRHCNLPR 156