BLASTX nr result
ID: Coptis21_contig00008792
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00008792 (543 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269948.1| PREDICTED: uncharacterized protein LOC100243... 60 2e-07 ref|XP_002530671.1| conserved hypothetical protein [Ricinus comm... 59 6e-07 ref|XP_002331464.1| predicted protein [Populus trichocarpa] gi|2... 55 9e-06 >ref|XP_002269948.1| PREDICTED: uncharacterized protein LOC100243925 [Vitis vinifera] Length = 396 Score = 60.1 bits (144), Expect = 2e-07 Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 12/81 (14%) Frame = +2 Query: 5 RDLRGDRRNFGPA-AGDYRQGAASSYSQ-----------SYPGPGEGQRFSQMEQRDGMQ 148 RD+RGD RN+ P +G+Y QG SY Q + G GEGQRFSQ++QR+ MQ Sbjct: 320 RDVRGDNRNYNPQHSGNYGQGTGGSYGQGMGSGPSGYGQAQQGHGEGQRFSQVDQRNDMQ 379 Query: 149 GGEQQNFNPPMGQMRNDQGQY 211 EQ+N+ PP G +QG+Y Sbjct: 380 -DEQRNY-PPTG--NTNQGRY 396 >ref|XP_002530671.1| conserved hypothetical protein [Ricinus communis] gi|223529764|gb|EEF31702.1| conserved hypothetical protein [Ricinus communis] Length = 394 Score = 58.5 bits (140), Expect = 6e-07 Identities = 36/72 (50%), Positives = 41/72 (56%), Gaps = 9/72 (12%) Frame = +2 Query: 5 RDLRGDRRNFGPAAGD---------YRQGAASSYSQSYPGPGEGQRFSQMEQRDGMQGGE 157 RD RGD RNF P+ + Y QG + Y Q YPG EG RFSQMEQR+ GE Sbjct: 328 RDFRGDNRNFSPSHAETCGQGTNAGYGQGTNAGYGQGYPG--EGPRFSQMEQRNIQ--GE 383 Query: 158 QQNFNPPMGQMR 193 Q N+ PMGQ R Sbjct: 384 QANYT-PMGQTR 394 >ref|XP_002331464.1| predicted protein [Populus trichocarpa] gi|222873542|gb|EEF10673.1| predicted protein [Populus trichocarpa] Length = 886 Score = 54.7 bits (130), Expect = 9e-06 Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 1/62 (1%) Frame = +2 Query: 5 RDLRGDRRNFGPA-AGDYRQGAASSYSQSYPGPGEGQRFSQMEQRDGMQGGEQQNFNPPM 181 RD RGD N+ P G+Y QG +SY Q + PGEGQR +QME R GMQ GEQ N+ PM Sbjct: 321 RDYRGDNWNYSPTHGGNYGQGGNTSYGQRH--PGEGQRSAQMELR-GMQ-GEQGNY-APM 375 Query: 182 GQ 187 GQ Sbjct: 376 GQ 377