BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008788
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis ...   130   5e-28
ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vit...   130   6e-28
ref|XP_002524681.1| conserved hypothetical protein [Ricinus comm...   125   1e-26
emb|CBI23311.3| unnamed protein product [Vitis vinifera]              122   2e-25
ref|XP_004134730.1| PREDICTED: F-box protein SKIP27-like [Cucumi...   121   3e-25

>ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis vinifera]
          Length = 172

 Score =  130 bits (327), Expect = 5e-28
 Identities = 84/179 (46%), Positives = 105/179 (58%), Gaps = 8/179 (4%)
 Frame = -2

Query: 845 MALQVKFGSLSKYGSWNEFDFDEMDKDFGVVRCTGAFGRKRV------EPSPCSSPFRTP 684
           MAL  + GS  K G       +E+   F  V  T +  RKR+      E S  SS  RTP
Sbjct: 1   MALGRRHGSQMKGGD------EELGLGFAPV--TRSLSRKRILVSSNTESSSPSSVLRTP 52

Query: 683 LKRQCS--VKLNFDKSLLEALPQDILVRILCGVEHDDLEQLQYVSRSIRDATLIAKNWHF 510
           LKR+C   V+   +KS+LEA+PQDIL+RILCGV+HDDL+QL +VS +IRDATLIAK  HF
Sbjct: 53  LKRRCGEMVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHF 112

Query: 509 AYHTPSSKTASLKSFRIVDDEYFDSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHSPE 333
           AY TPS            +   FD   TP+AP   +   SR +GR LS I++ALF S E
Sbjct: 113 AYSTPSKVQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRKLSGIAIALFSSDE 171


>ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vitis vinifera]
          Length = 172

 Score =  130 bits (326), Expect = 6e-28
 Identities = 82/179 (45%), Positives = 104/179 (58%), Gaps = 8/179 (4%)
 Frame = -2

Query: 845 MALQVKFGSLSKYGSWNEFDFDEMDKDFGVVRCTGAFGRKRV------EPSPCSSPFRTP 684
           MAL  + GS  K G        + +   G V  T +  RKR+      E S  SS  RTP
Sbjct: 1   MALGRRHGSQMKGG--------DEELGLGFVPVTRSLSRKRILVSSNTESSSPSSVLRTP 52

Query: 683 LKRQCS--VKLNFDKSLLEALPQDILVRILCGVEHDDLEQLQYVSRSIRDATLIAKNWHF 510
           LKR+C   V+   +KS+LEA+PQDIL+RILCGV+HDDL+QL +VS +IRDATLIAK  HF
Sbjct: 53  LKRRCGEMVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHF 112

Query: 509 AYHTPSSKTASLKSFRIVDDEYFDSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHSPE 333
           A+ TPS            +   FD   TP+AP   +   SR +GR LS I++ALF S E
Sbjct: 113 AFSTPSKVQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRRLSGIAIALFSSDE 171


>ref|XP_002524681.1| conserved hypothetical protein [Ricinus communis]
           gi|223536042|gb|EEF37700.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 221

 Score =  125 bits (314), Expect = 1e-26
 Identities = 79/172 (45%), Positives = 97/172 (56%), Gaps = 21/172 (12%)
 Frame = -2

Query: 788 DFDEMDKDFGVVRCTGAFGRKRVEPSPC------SSPFRTPLKRQCSVK----------- 660
           D DE  K  G VR T +FGRKR+  S         SP +TPLKR CS++           
Sbjct: 18  DSDEAFKRLGCVRYTRSFGRKRIVISNAVDLLTLDSPIKTPLKRLCSLEPENPIKTPLKR 77

Query: 659 ---LNFDKSLLEALPQDILVRILCGVEHDDLEQLQYVSRSIRDATLIAKNWHFAYHTPSS 489
              L  +KS LE LPQDILVR+LC V HDDL+QL +VS +IR+ATL+A+  HFAY TP  
Sbjct: 78  LCSLEPEKSTLETLPQDILVRVLCCVNHDDLKQLFHVSTAIREATLVARKLHFAYSTPRK 137

Query: 488 KTASLKSFRIVDD-EYFDSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHSP 336
             A        ++   FD    PNAP   + + SR   +NL DISVALF SP
Sbjct: 138 IPAFRTPIASTENPTEFDEFEAPNAPKVSRCYKSRLNRKNLMDISVALFASP 189


>emb|CBI23311.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  122 bits (305), Expect = 2e-25
 Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
 Frame = -2

Query: 692 RTPLKRQCS--VKLNFDKSLLEALPQDILVRILCGVEHDDLEQLQYVSRSIRDATLIAKN 519
           RTPLKR+C   V+   +KS+LEA+PQDIL+RILCGV+HDDL+QL +VS +IRDATLIAK 
Sbjct: 308 RTPLKRRCGEMVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKK 367

Query: 518 WHFAYHTPSSKTASLKSFRIVDDEYFDSHPTPNAPGPGKGHWSRTKGRNLSDISVALFHS 339
            HFAY TPS            +   FD   TP+AP   +   SR +GR LS I++ALF S
Sbjct: 368 SHFAYSTPSKVQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRKLSGIAIALFSS 427

Query: 338 PE 333
            E
Sbjct: 428 DE 429


>ref|XP_004134730.1| PREDICTED: F-box protein SKIP27-like [Cucumis sativus]
          Length = 190

 Score =  121 bits (303), Expect = 3e-25
 Identities = 73/154 (47%), Positives = 94/154 (61%), Gaps = 9/154 (5%)
 Frame = -2

Query: 767 DFGVVRCTGAFGRKRV------EPSPCSSPFRTPLKRQCSV---KLNFDKSLLEALPQDI 615
           DFGVVR T   GRKRV      E SP     + P KR+C+V    +  D+SLLEALPQ+I
Sbjct: 24  DFGVVRYTRGLGRKRVVISCHEEDSPTDLTPKAPSKRRCNVVSTAVEDDRSLLEALPQEI 83

Query: 614 LVRILCGVEHDDLEQLQYVSRSIRDATLIAKNWHFAYHTPSSKTASLKSFRIVDDEYFDS 435
           L+R+LCGVEHDDL+QL  VS++I +ATLIAK+ HFAY TPS       +  + D   FD 
Sbjct: 84  LIRVLCGVEHDDLKQLIRVSKTINEATLIAKDSHFAYSTPSKVRRFRTAIELDDSSDFDE 143

Query: 434 HPTPNAPGPGKGHWSRTKGRNLSDISVALFHSPE 333
              PNA  P +   +    + L++IS+ALF   E
Sbjct: 144 IEAPNA-CPTRRFRTPLNRKKLAEISIALFAEEE 176