BLASTX nr result

ID: Coptis21_contig00008760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008760
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544361.1| PREDICTED: potassium channel SKOR-like [Glyc...   192   8e-47
ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glyc...   192   8e-47
ref|XP_002301665.1| predicted protein [Populus trichocarpa] gi|2...   182   8e-44
ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|2...   175   8e-42
emb|CAC10514.1| outwardly rectifying potassium channel [Samanea ...   173   4e-41

>ref|XP_003544361.1| PREDICTED: potassium channel SKOR-like [Glycine max]
          Length = 850

 Score =  192 bits (487), Expect = 8e-47
 Identities = 91/133 (68%), Positives = 110/133 (82%)
 Frame = -2

Query: 402 RIISSQGSRFKLITNEFGLRWDRRRFGSGSVMNGIRGFSKDFVINPDNRYYHIWTHIILI 223
           R+ SS+GSRF LI N+ GL     +F   ++++GIRGFS DFVI+PDNR+Y  WT  IL+
Sbjct: 56  RLKSSRGSRFDLIENQLGLNSTWSKFSRQALLHGIRGFSVDFVIHPDNRWYRAWTKFILL 115

Query: 222 WAVYSSFFTPIEFGFFRGLPKDLRFLDIAGQVAFLIDIVVNFFLAYRDSETYLMVYKRTP 43
           WAVYSSFFTP+EFGFFRGLP++L  LDI GQ+AFL+DIV+ FF+AYRDS+TY  VYKRTP
Sbjct: 116 WAVYSSFFTPMEFGFFRGLPENLFILDIIGQIAFLVDIVLQFFVAYRDSQTYRTVYKRTP 175

Query: 42  IALRYLKSNFIFD 4
           IALRYLKSNFIFD
Sbjct: 176 IALRYLKSNFIFD 188


>ref|XP_003518370.1| PREDICTED: potassium channel SKOR-like [Glycine max]
          Length = 849

 Score =  192 bits (487), Expect = 8e-47
 Identities = 93/137 (67%), Positives = 112/137 (81%), Gaps = 4/137 (2%)
 Frame = -2

Query: 402 RIISSQGSRFKLITNEFGLRWDRRRFGSGSVMNGIRGFS----KDFVINPDNRYYHIWTH 235
           R+ SSQGS F LI N+ GL     +F   ++++GIRGFS    KDFVI+PDNR+Y  WT+
Sbjct: 51  RLKSSQGSMFNLIENQLGLNSTWSKFSRQALLHGIRGFSMDLVKDFVIHPDNRWYRAWTN 110

Query: 234 IILIWAVYSSFFTPIEFGFFRGLPKDLRFLDIAGQVAFLIDIVVNFFLAYRDSETYLMVY 55
            IL+WAVYSSFFTP+EFGFFRGLP++L  LDI GQ+AFL+DIV+ FF+AYRDS+TY MVY
Sbjct: 111 FILVWAVYSSFFTPMEFGFFRGLPENLFILDIIGQIAFLVDIVLQFFVAYRDSQTYRMVY 170

Query: 54  KRTPIALRYLKSNFIFD 4
           KRTPIALRYLKSNFIFD
Sbjct: 171 KRTPIALRYLKSNFIFD 187


>ref|XP_002301665.1| predicted protein [Populus trichocarpa] gi|222843391|gb|EEE80938.1|
           predicted protein [Populus trichocarpa]
          Length = 841

 Score =  182 bits (461), Expect = 8e-44
 Identities = 93/143 (65%), Positives = 108/143 (75%), Gaps = 10/143 (6%)
 Frame = -2

Query: 402 RIISSQGSRFKLITNEFGL----------RWDRRRFGSGSVMNGIRGFSKDFVINPDNRY 253
           RI SS+GSRF LI  EFGL           W RR+    SV+NGIR  S  FVI+PDNR+
Sbjct: 32  RIKSSRGSRFNLIEKEFGLVNNNGSSSMTSW-RRKLSRESVINGIRYVSSGFVIHPDNRW 90

Query: 252 YHIWTHIILIWAVYSSFFTPIEFGFFRGLPKDLRFLDIAGQVAFLIDIVVNFFLAYRDSE 73
           Y  WT  IL+WAVYSSFFTP+EFGFFRGLP++L  LDI GQVAFL+DI++ FF+AYRDS+
Sbjct: 91  YRAWTKFILLWAVYSSFFTPMEFGFFRGLPENLFILDIVGQVAFLLDIILQFFIAYRDSQ 150

Query: 72  TYLMVYKRTPIALRYLKSNFIFD 4
           TY  VYKRTPIALRYLKS+FI D
Sbjct: 151 TYRTVYKRTPIALRYLKSHFIID 173


>ref|XP_002305894.1| predicted protein [Populus trichocarpa] gi|222848858|gb|EEE86405.1|
           predicted protein [Populus trichocarpa]
          Length = 821

 Score =  175 bits (444), Expect = 8e-42
 Identities = 89/142 (62%), Positives = 108/142 (76%), Gaps = 9/142 (6%)
 Frame = -2

Query: 402 RIISSQGSRFKLITNEFGLRWD---------RRRFGSGSVMNGIRGFSKDFVINPDNRYY 250
           RI SS+GSRF L+ NEFGL  +         RR+    SV+NGIR  S    I+PDNR+Y
Sbjct: 20  RIKSSRGSRFNLLENEFGLVNNTESSLITNLRRKLSRESVINGIRYVSTGPAIHPDNRWY 79

Query: 249 HIWTHIILIWAVYSSFFTPIEFGFFRGLPKDLRFLDIAGQVAFLIDIVVNFFLAYRDSET 70
             WT  IL+WAVYSSFFTP+EFGFFRGLP++L  +DI GQVAFL+DIV+ FF+AYRDS+T
Sbjct: 80  RAWTIFILLWAVYSSFFTPMEFGFFRGLPENLFIMDIVGQVAFLLDIVLQFFVAYRDSQT 139

Query: 69  YLMVYKRTPIALRYLKSNFIFD 4
           Y M+YKR+PIALRYLKS+FI D
Sbjct: 140 YRMIYKRSPIALRYLKSHFIID 161


>emb|CAC10514.1| outwardly rectifying potassium channel [Samanea saman]
          Length = 841

 Score =  173 bits (438), Expect = 4e-41
 Identities = 89/134 (66%), Positives = 109/134 (81%), Gaps = 1/134 (0%)
 Frame = -2

Query: 402 RIISSQGSRFKLITNEFGLRWDRRRFGSGSVMNGIRGFSKDFVINPD-NRYYHIWTHIIL 226
           R+ SS+GSRF+LI +E  L+   +R  S  V++GIRGFSKDF+I+P+ NR+Y  WT  IL
Sbjct: 47  RLKSSRGSRFRLIEDE--LKELNQRKLSRYVLDGIRGFSKDFIIHPEKNRWYQAWTKFIL 104

Query: 225 IWAVYSSFFTPIEFGFFRGLPKDLRFLDIAGQVAFLIDIVVNFFLAYRDSETYLMVYKRT 46
           +WA+YSSFFTP+EFGFFRGL KDL  LDI GQVAFL+DIVV F LAYRDS+TY M+YK +
Sbjct: 105 LWAIYSSFFTPMEFGFFRGLDKDLFILDIIGQVAFLVDIVVQFCLAYRDSQTYRMIYKPS 164

Query: 45  PIALRYLKSNFIFD 4
            IALRYLKS+FIFD
Sbjct: 165 SIALRYLKSSFIFD 178


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