BLASTX nr result

ID: Coptis21_contig00008752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008752
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ06405.1| VRN5-like protein [Aquilegia coerulea]                 382   e-104
ref|XP_002331732.1| predicted protein [Populus trichocarpa] gi|2...   306   4e-81
ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|2...   296   3e-78
ref|XP_002515582.1| conserved hypothetical protein [Ricinus comm...   294   2e-77
ref|XP_004148714.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   280   3e-73

>gb|AEZ06405.1| VRN5-like protein [Aquilegia coerulea]
          Length = 696

 Score =  382 bits (980), Expect = e-104
 Identities = 191/263 (72%), Positives = 215/263 (81%)
 Frame = -1

Query: 793  LWYCKSRDEPHQKEPICVFPSAQRRILISNLQPCTEYTFRIVSYTESGDLGHSEAKCFTK 614
            LWYC+SR+E H KEPICVFP AQRRILISNLQPCTEY FRIVSY+E+GDLGHSEAKCFTK
Sbjct: 346  LWYCQSRNESHAKEPICVFPRAQRRILISNLQPCTEYNFRIVSYSEAGDLGHSEAKCFTK 405

Query: 613  SVEIIHKISDLTEPLDCKMEKPSLVGSSSTKREPKFTEAVGSSGFKVRDLGKILRIAWAQ 434
            SVEI+ K  D  E  + K+      G SSTKREPK TEAVGSSGFKVRDLGKILRIAWAQ
Sbjct: 406  SVEILLKHPDSAEEFNPKI---CFYGGSSTKREPKLTEAVGSSGFKVRDLGKILRIAWAQ 462

Query: 433  EEGCFDRFCSADGEEECCGRNSSVEPETAFEDKRPYAANNFDLNVASVPDLNAEVIPMEY 254
            EEG FD  CSADGEEECCGRN++  PE  +ED+RPY  NNFDLNVASVPDLNAEVIP+EY
Sbjct: 463  EEGSFDGICSADGEEECCGRNNADAPEMTYEDQRPYVGNNFDLNVASVPDLNAEVIPIEY 522

Query: 253  SRDDIECSSEQLVEPDDDVVSHGNENNGRVRSNGSNDSQTWLVRPIRELPAVESRTGTGL 74
            SRDDIEC+S+Q    +DDVVS+G E   RV SNGS+DSQ WLV+ I+ LP VESR  TGL
Sbjct: 523  SRDDIECTSDQ---HEDDVVSNGTEKKDRVTSNGSDDSQAWLVKQIKGLPTVESR--TGL 577

Query: 73   CRKRMSSTNEDTYDCDSVLMDAS 5
            CRKR+S  +++ YDCDSVLM+ S
Sbjct: 578  CRKRISRNDDEAYDCDSVLMNNS 600


>ref|XP_002331732.1| predicted protein [Populus trichocarpa] gi|222874135|gb|EEF11266.1|
            predicted protein [Populus trichocarpa]
          Length = 612

 Score =  306 bits (783), Expect = 4e-81
 Identities = 160/266 (60%), Positives = 194/266 (72%), Gaps = 2/266 (0%)
 Frame = -1

Query: 793  LWYCKSRDEPHQKEPICVFPSAQRRILISNLQPCTEYTFRIVSYTESGDLGHSEAKCFTK 614
            LWYCKSR+E H KEPIC+FP +QRRILISNLQPCTEYTFRIVSYTE+GDLGHSEAKCFTK
Sbjct: 256  LWYCKSREETHAKEPICMFPRSQRRILISNLQPCTEYTFRIVSYTEAGDLGHSEAKCFTK 315

Query: 613  SVEIIHKISDLTEPLDCKMEKPSLVG-SSSTKREPKFTEAVGSSGFKVRDLGKILRIAWA 437
            S+EII K  + +   + K E     G +SS  R+ K T AV SSGF VRDLGKIL +A A
Sbjct: 316  SIEIIQKNPNPSVARNGKKENTVTGGYTSSYNRDSKTTTAVNSSGFMVRDLGKILHLAGA 375

Query: 436  QEEGCFDRFCSADGEEECCGRNSSVEPETAFEDKRPYAANNFDLNVASVPDLNAEVIPME 257
            Q++GCF+ FCSAD  E+CCG +  V+P+T+ ED  P  ++  DLNV SVPDLN E+ P E
Sbjct: 376  QKQGCFEGFCSAD-TEKCCGGSKVVKPQTS-EDPVPSISHGLDLNVVSVPDLNEELTPFE 433

Query: 256  YSRD-DIECSSEQLVEPDDDVVSHGNENNGRVRSNGSNDSQTWLVRPIRELPAVESRTGT 80
             SRD D  C+ EQ +E DDD  SH  E N   RS+G+ DSQTW+  P RE+P V+SR  +
Sbjct: 434  SSRDEDNGCTLEQAIEADDDAASHDVEKNDLARSHGTGDSQTWMHGPSREVPTVDSR--S 491

Query: 79   GLCRKRMSSTNEDTYDCDSVLMDASP 2
             LCRKR + TNED +DCDS L++ SP
Sbjct: 492  ELCRKRAAHTNEDVHDCDSTLINESP 517


>ref|XP_002324971.1| predicted protein [Populus trichocarpa] gi|222866405|gb|EEF03536.1|
            predicted protein [Populus trichocarpa]
          Length = 717

 Score =  296 bits (758), Expect = 3e-78
 Identities = 157/267 (58%), Positives = 191/267 (71%), Gaps = 3/267 (1%)
 Frame = -1

Query: 793  LWYCKSRDEPHQKEPICVFPSAQRRILISNLQPCTEYTFRIVSYTESGDLGHSEAKCFTK 614
            LWYCKSR+E H KEPICVFP +QRRILISNLQPCTEYTFRIVSYTE+GDLGHSEAKCFTK
Sbjct: 360  LWYCKSREETHAKEPICVFPRSQRRILISNLQPCTEYTFRIVSYTEAGDLGHSEAKCFTK 419

Query: 613  SVEIIHKISDLTEPLDCKMEKPSLVG-SSSTKREPKFTEAVGSSGFKVRDLGKILRIAWA 437
            S+EIIHK  + +   + K E     G +SS  R+ +    V SSGFKVRDLGKIL +A A
Sbjct: 420  SIEIIHKNPNPSVARNSKKENTITGGCTSSYNRDSETATGVNSSGFKVRDLGKILHLAGA 479

Query: 436  QEEGCFDRFCSADGEEECCGRNSSVEPETAFEDKRPYAANNFDLNVASVPDLNAEVI-PM 260
            Q++GCF+ FCSAD  E+CCG +  V+ +T+ ED  P  ++  DLNV S+PDLN E+  P 
Sbjct: 480  QQQGCFEGFCSAD-TEKCCGASKLVKLQTS-EDPVPSVSHGLDLNVVSMPDLNEELTPPF 537

Query: 259  EYSRD-DIECSSEQLVEPDDDVVSHGNENNGRVRSNGSNDSQTWLVRPIRELPAVESRTG 83
            E SRD D  C+ EQ +E DDD  SH  E NG   S+GS DSQTW+  P  E+P V+SR  
Sbjct: 538  ESSRDEDNGCTLEQAIEADDDAASHEVEKNGLATSHGSGDSQTWMHGPSGEVPTVDSR-- 595

Query: 82   TGLCRKRMSSTNEDTYDCDSVLMDASP 2
            + LCRKR +  NED +DCDS L++ SP
Sbjct: 596  SELCRKRAAHANEDLHDCDSTLINGSP 622


>ref|XP_002515582.1| conserved hypothetical protein [Ricinus communis]
            gi|223545526|gb|EEF47031.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 725

 Score =  294 bits (752), Expect = 2e-77
 Identities = 157/267 (58%), Positives = 189/267 (70%), Gaps = 3/267 (1%)
 Frame = -1

Query: 793  LWYCKSRDEPHQKEPICVFPSAQRRILISNLQPCTEYTFRIVSYTESGDLGHSEAKCFTK 614
            LWYCKS +E   K+P+CVFP  QRRILISNLQPCTEYTFRIVSYTE+GD GHSEAKCFTK
Sbjct: 371  LWYCKSIEEAQTKDPLCVFPRTQRRILISNLQPCTEYTFRIVSYTEAGDFGHSEAKCFTK 430

Query: 613  SVEIIHKISDLTEPLDCKMEKPSLVGS-SSTKREPKFTEAVGSSGFKVRDLGKILRIAWA 437
            S+EIIHK  + +   + K    SL G  S ++RE K T    SSGFKVR+LGKIL +AWA
Sbjct: 431  SIEIIHKNPNSSVSTNGKNANNSLEGGMSGSRRESKST---NSSGFKVRELGKILHLAWA 487

Query: 436  QEEGCFDRFCSADGEEECCGRNSSVEPETAFEDKRPYAANNFDLNVASVPDLNAEVI-PM 260
            Q++GCF+ FCSAD  E+CCG     +PET  ED+ P  +   DLNV SVPDLN E+  P+
Sbjct: 488  QKQGCFEGFCSAD-TEKCCGATEVTKPETP-EDELPSISRGLDLNVVSVPDLNEELTPPL 545

Query: 259  EYSRD-DIECSSEQLVEPDDDVVSHGNENNGRVRSNGSNDSQTWLVRPIRELPAVESRTG 83
            E SRD D  C+ EQ VE DDD  SH  + NG  RS+GS DSQTW   P  E+PAV+SR  
Sbjct: 546  ESSRDEDNGCTLEQTVEADDDAASHDIKKNGLARSHGSGDSQTWTDGPSGEVPAVDSR-- 603

Query: 82   TGLCRKRMSSTNEDTYDCDSVLMDASP 2
              LCRKR + +NE+ +DCDS L++ SP
Sbjct: 604  AELCRKRAAHSNEEMHDCDSTLINGSP 630


>ref|XP_004148714.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis sativus]
            gi|449508259|ref|XP_004163265.1| PREDICTED: protein
            VERNALIZATION INSENSITIVE 3-like [Cucumis sativus]
          Length = 652

 Score =  280 bits (716), Expect = 3e-73
 Identities = 154/267 (57%), Positives = 185/267 (69%), Gaps = 3/267 (1%)
 Frame = -1

Query: 793  LWYCKSRDEPHQKEPICVFPSAQRRILISNLQPCTEYTFRIVSYTESGDLGHSEAKCFTK 614
            LWY KSR+E + KEPICVFP  QRRILISNLQPCTEYTFRIVSYTE+GD+GHSEAKCFTK
Sbjct: 296  LWYSKSREEEYTKEPICVFPRTQRRILISNLQPCTEYTFRIVSYTENGDIGHSEAKCFTK 355

Query: 613  SVEIIHKISDLTEPLDCKMEKPSLVGSSSTKREPKFTEAV-GSSGFKVRDLGKILRIAWA 437
            SVEIIH  S    P   + E P +  S   K+ P  T  V  SS F+VRDLGKIL++A  
Sbjct: 356  SVEIIHN-SHSPAPSIHRKESPVIEESCIRKKGPDNTFIVCSSSRFQVRDLGKILQLARD 414

Query: 436  QEEGCFDRFCSADGEEECCGRNSSVEPETAFEDKRPYAANNFDLNVASVPDLNAEVI-PM 260
            Q EGC +R CSA+     CG  + V+PET  E++ P  +   DLNV SVPDLN E+  P 
Sbjct: 415  QGEGCLERLCSAN-IANGCGVQNGVKPETPEEEQLPPVSPGLDLNVVSVPDLNEELTPPF 473

Query: 259  EYSRDDIE-CSSEQLVEPDDDVVSHGNENNGRVRSNGSNDSQTWLVRPIRELPAVESRTG 83
            EYSRD++  C+ +Q VE D+D  SH  E +G  RS+GS DSQ W   P  E+PAV+S   
Sbjct: 474  EYSRDEVNGCTLQQAVEADEDAASHDIEKSGLARSHGSGDSQIWTCGPNGEVPAVDSL-- 531

Query: 82   TGLCRKRMSSTNEDTYDCDSVLMDASP 2
            TGLCRKR +STNE+T DCDS L++ SP
Sbjct: 532  TGLCRKRAASTNEETNDCDSTLINGSP 558


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