BLASTX nr result

ID: Coptis21_contig00008748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008748
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276934.1| PREDICTED: uncharacterized protein LOC100263...   150   3e-34
ref|XP_003533195.1| PREDICTED: uncharacterized protein LOC100800...   143   4e-32
ref|XP_002312339.1| predicted protein [Populus trichocarpa] gi|2...   142   1e-31
ref|XP_002314929.1| predicted protein [Populus trichocarpa] gi|2...   141   2e-31
ref|NP_001237610.1| uncharacterized protein LOC100305849 [Glycin...   137   2e-30

>ref|XP_002276934.1| PREDICTED: uncharacterized protein LOC100263757 [Vitis vinifera]
           gi|296083265|emb|CBI22901.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score =  150 bits (380), Expect = 3e-34
 Identities = 78/108 (72%), Positives = 91/108 (84%), Gaps = 6/108 (5%)
 Frame = +2

Query: 110 SSNLETRSLFD-----DKGGHFDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEGA 274
           SSNLETRSL D     DKGG FDLGHPLLNR AESFVKAAGIGA+QAVSREAYFTA+EG+
Sbjct: 2   SSNLETRSLLDELRDFDKGGFFDLGHPLLNRFAESFVKAAGIGAIQAVSREAYFTAIEGS 61

Query: 275 GFDSGNGVPDVT-GHKKRGMPNFRGETSQKSLEAIVKNTGKESLQWGM 415
           G +S  GV +VT G KK+  P+ +GE+S+KSLEA+VK+TGKESLQWG+
Sbjct: 62  GLESPGGVTEVTVGGKKQRFPDLKGESSRKSLEALVKSTGKESLQWGL 109


>ref|XP_003533195.1| PREDICTED: uncharacterized protein LOC100800540 [Glycine max]
          Length = 181

 Score =  143 bits (361), Expect = 4e-32
 Identities = 73/108 (67%), Positives = 88/108 (81%), Gaps = 6/108 (5%)
 Frame = +2

Query: 110 SSNLETRSLFDD-----KGGHFDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEGA 274
           SSNLETRSL D+     K G FDLGHPLLNR+ E+FVKAAGIGAVQAVSREAYFTA+EG 
Sbjct: 6   SSNLETRSLLDELCNFHKKGLFDLGHPLLNRILETFVKAAGIGAVQAVSREAYFTAIEGT 65

Query: 275 GFDSGNGV-PDVTGHKKRGMPNFRGETSQKSLEAIVKNTGKESLQWGM 415
           G D+  G+ P+++  KK  +P+ +GET+ KSLEA+VKNTGKESLQWG+
Sbjct: 66  GTDNSGGLPPEISSAKKNRLPSLKGETNNKSLEAMVKNTGKESLQWGV 113


>ref|XP_002312339.1| predicted protein [Populus trichocarpa] gi|222852159|gb|EEE89706.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  142 bits (358), Expect = 1e-31
 Identities = 74/110 (67%), Positives = 86/110 (78%), Gaps = 8/110 (7%)
 Frame = +2

Query: 110 SSNLETRSLFD-----DKGGHFDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEGA 274
           S NLETRSL       DK   FD GHPLLNR+AESFVKAAGIGA+QAVSREAYFTA+EG+
Sbjct: 2   SHNLETRSLMGEIRRFDKCCFFDFGHPLLNRIAESFVKAAGIGAIQAVSREAYFTAIEGS 61

Query: 275 GFDSGNGVP---DVTGHKKRGMPNFRGETSQKSLEAIVKNTGKESLQWGM 415
           GF+S  GVP    V G K+   P+ RGET++KSLEA+V+NTGKESLQWG+
Sbjct: 62  GFESSGGVPPEISVDGKKRHRAPDLRGETNRKSLEALVRNTGKESLQWGL 111


>ref|XP_002314929.1| predicted protein [Populus trichocarpa] gi|222863969|gb|EEF01100.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  141 bits (355), Expect = 2e-31
 Identities = 73/110 (66%), Positives = 83/110 (75%), Gaps = 8/110 (7%)
 Frame = +2

Query: 110 SSNLETRSLFD-----DKGGHFDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEGA 274
           S NLETRS  D     DK   FD GHPLLNR+AESFVKAAGIGA+QAVSREAYFTA+EGA
Sbjct: 2   SHNLETRSFVDEIRHFDKSSFFDFGHPLLNRIAESFVKAAGIGAIQAVSREAYFTAIEGA 61

Query: 275 GFDSGNGVP---DVTGHKKRGMPNFRGETSQKSLEAIVKNTGKESLQWGM 415
           G +S  G+P    V G K    P+ RGET++KSLEA+V NTGKESLQWG+
Sbjct: 62  GLESSGGLPAEISVDGKKPHRFPDLRGETNRKSLEALVMNTGKESLQWGL 111


>ref|NP_001237610.1| uncharacterized protein LOC100305849 [Glycine max]
           gi|255626765|gb|ACU13727.1| unknown [Glycine max]
          Length = 181

 Score =  137 bits (346), Expect = 2e-30
 Identities = 71/108 (65%), Positives = 86/108 (79%), Gaps = 6/108 (5%)
 Frame = +2

Query: 110 SSNLETRSLFDD-----KGGHFDLGHPLLNRVAESFVKAAGIGAVQAVSREAYFTAVEGA 274
           SS+LETRSL D+     K G  DLGHPLLNR+ ESFVKAAGIGAVQAVSREAYFTA++G 
Sbjct: 6   SSDLETRSLLDELCNFNKKGLLDLGHPLLNRIFESFVKAAGIGAVQAVSREAYFTAIDGT 65

Query: 275 GFDSGNGV-PDVTGHKKRGMPNFRGETSQKSLEAIVKNTGKESLQWGM 415
           G D+  G+ P+++  KK  +P  +GETS KSLEA+VK+TGKESLQWG+
Sbjct: 66  GADNSGGLPPEISSAKKNRLPGLKGETSNKSLEAMVKSTGKESLQWGV 113


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