BLASTX nr result

ID: Coptis21_contig00008745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008745
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512625.1| conserved hypothetical protein [Ricinus comm...   148   5e-34
ref|NP_001236622.1| uncharacterized protein LOC100306040 precurs...   142   2e-32
gb|ADN33846.1| hypothetical protein [Cucumis melo subsp. melo]        142   4e-32
ref|XP_004142564.1| PREDICTED: uncharacterized protein LOC101221...   140   1e-31
ref|XP_002279065.2| PREDICTED: uncharacterized protein LOC100249...   140   1e-31

>ref|XP_002512625.1| conserved hypothetical protein [Ricinus communis]
           gi|223548586|gb|EEF50077.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score =  148 bits (373), Expect = 5e-34
 Identities = 65/93 (69%), Positives = 75/93 (80%)
 Frame = +2

Query: 164 TIHNARFVHGVLENGSMVPLIEPENMMSSMPVVLNDTRRRLGSFQICALCTCCGGPRGLC 343
           T  N    +G   +  MVPL+EPE  +  M +++N++RRRLGSFQICALCTCCGG +GLC
Sbjct: 26  TSTNVAQANGSAISNEMVPLMEPEKAVK-MRLMVNESRRRLGSFQICALCTCCGGAKGLC 84

Query: 344 LPSPCCYAINCNIPNRPFGVCSFTPKTCNCFGC 442
           LPSPCCYAINCNIPNRPFG CSFTPKTCNCFGC
Sbjct: 85  LPSPCCYAINCNIPNRPFGFCSFTPKTCNCFGC 117


>ref|NP_001236622.1| uncharacterized protein LOC100306040 precursor [Glycine max]
           gi|356531910|ref|XP_003534519.1| PREDICTED:
           uncharacterized protein LOC100787156 [Glycine max]
           gi|255627359|gb|ACU14024.1| unknown [Glycine max]
          Length = 109

 Score =  142 bits (359), Expect = 2e-32
 Identities = 62/91 (68%), Positives = 73/91 (80%)
 Frame = +2

Query: 170 HNARFVHGVLENGSMVPLIEPENMMSSMPVVLNDTRRRLGSFQICALCTCCGGPRGLCLP 349
           + A  VH    +  MVPL+E   M   M +V+N++RR+LGSFQICALCTCCGG +G+CLP
Sbjct: 19  NEASLVHEANGSFPMVPLVEAGKM--EMMMVMNESRRKLGSFQICALCTCCGGAKGMCLP 76

Query: 350 SPCCYAINCNIPNRPFGVCSFTPKTCNCFGC 442
           SPCCYAINCNIP+RPFG CSFTPKTCNCFGC
Sbjct: 77  SPCCYAINCNIPHRPFGFCSFTPKTCNCFGC 107


>gb|ADN33846.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 116

 Score =  142 bits (357), Expect = 4e-32
 Identities = 66/97 (68%), Positives = 74/97 (76%)
 Frame = +2

Query: 152 TIIATIHNARFVHGVLENGSMVPLIEPENMMSSMPVVLNDTRRRLGSFQICALCTCCGGP 331
           T++AT +   F         MVPLIE E  M+ M   +N+TRRRLGSFQICA CTCCGG 
Sbjct: 21  TVLATGNELSFTQSNGSVAEMVPLIE-EGKMNVME--MNETRRRLGSFQICAPCTCCGGA 77

Query: 332 RGLCLPSPCCYAINCNIPNRPFGVCSFTPKTCNCFGC 442
           +GLCLPSPCCYAINCNIPNRPFG CSFTPK+CNCFGC
Sbjct: 78  KGLCLPSPCCYAINCNIPNRPFGFCSFTPKSCNCFGC 114


>ref|XP_004142564.1| PREDICTED: uncharacterized protein LOC101221700 [Cucumis sativus]
           gi|449485359|ref|XP_004157144.1| PREDICTED:
           uncharacterized LOC101221700 [Cucumis sativus]
          Length = 116

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/96 (67%), Positives = 73/96 (76%)
 Frame = +2

Query: 155 IIATIHNARFVHGVLENGSMVPLIEPENMMSSMPVVLNDTRRRLGSFQICALCTCCGGPR 334
           ++AT +   F         MVPLIE E  M+ M   +N+TRRRLGSFQICA CTCCGG +
Sbjct: 22  VLATGNQLSFTQSNGSVAEMVPLIE-EGKMNMME--MNETRRRLGSFQICAPCTCCGGAK 78

Query: 335 GLCLPSPCCYAINCNIPNRPFGVCSFTPKTCNCFGC 442
           GLCLPSPCCYAINCNIPNRPFG CSFTPK+CNCFGC
Sbjct: 79  GLCLPSPCCYAINCNIPNRPFGFCSFTPKSCNCFGC 114


>ref|XP_002279065.2| PREDICTED: uncharacterized protein LOC100249671 [Vitis vinifera]
          Length = 122

 Score =  140 bits (353), Expect = 1e-31
 Identities = 60/77 (77%), Positives = 67/77 (87%)
 Frame = +2

Query: 212 MVPLIEPENMMSSMPVVLNDTRRRLGSFQICALCTCCGGPRGLCLPSPCCYAINCNIPNR 391
           MVP++E       + +VLN++RRRLGSFQICALCTCCGG +GLCLPSPCCYAINCNIPNR
Sbjct: 49  MVPVVEER-----VEMVLNESRRRLGSFQICALCTCCGGAKGLCLPSPCCYAINCNIPNR 103

Query: 392 PFGVCSFTPKTCNCFGC 442
           PFG CSFTPKTCNCFGC
Sbjct: 104 PFGFCSFTPKTCNCFGC 120


Top