BLASTX nr result

ID: Coptis21_contig00008738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008738
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267126.1| PREDICTED: uncharacterized protein LOC100243...   430   e-118
ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cuc...   426   e-117
ref|XP_002518526.1| Tumor suppressor candidate, putative [Ricinu...   417   e-114
ref|XP_002888069.1| OST3/OST6 family protein [Arabidopsis lyrata...   416   e-114
ref|NP_176372.1| OST3 and OST6 domain-containing protein [Arabid...   415   e-113

>ref|XP_002267126.1| PREDICTED: uncharacterized protein LOC100243455 [Vitis vinifera]
            gi|147770840|emb|CAN74174.1| hypothetical protein
            VITISV_019222 [Vitis vinifera]
          Length = 339

 Score =  430 bits (1106), Expect = e-118
 Identities = 209/311 (67%), Positives = 258/311 (82%), Gaps = 3/311 (0%)
 Frame = +3

Query: 90   SDSDLVQELLHLKSQSKSGIIHLNDISLSRFLTKT---RSYSLLIFFDATQLHDKTELHL 260
            ++SD V ELL L+S+SKSG+IHL+D SLSRFLT T   R YS+LIFFDATQLHDK EL+L
Sbjct: 23   AESDRVAELLSLQSRSKSGVIHLDDHSLSRFLTSTTTPRPYSILIFFDATQLHDKPELNL 82

Query: 261  KDLRFEYELVATAFSINNKNTPHETKLFFCDIEFKESQNSFALFGVNALPHVRHVGPRVR 440
            + LR E+ L+A++F  NNK++P  +KLFFCDIEFKESQ+SFA FG+ +LPH+R VGP V+
Sbjct: 83   QGLRSEFGLLASSFISNNKDSPSASKLFFCDIEFKESQSSFAQFGITSLPHIRLVGPDVK 142

Query: 441  NLKDSEAMDQGDFARMAESMSEFVESKTGLTVGPVQRPPFMSSKQIGVIVIGVLLSTPFF 620
            +LKDSE M+QGD +RMA+SMS+FVES+T L+VGP++RPP  S KQ+G  V   L+  PF 
Sbjct: 143  SLKDSEQMEQGDISRMADSMSDFVESRTKLSVGPIKRPPMFSKKQLGFFVAAFLVWAPFV 202

Query: 621  IKRIMEGNTIFHDRILWLCLSVFVYFFSVSGAMHNIIRKMPMFIADRNDPTKLVFFYQGN 800
            +K+++ G T+ HD  +WL  +VFVYFFSVSG MHNIIRKMPMF+ADRNDP+KL+FFYQG+
Sbjct: 203  VKKVLAGQTLLHDSKIWLGSAVFVYFFSVSGTMHNIIRKMPMFLADRNDPSKLIFFYQGS 262

Query: 801  GMQLGAEGFTVGFLYTVVGLLLAFVSHVLVRVRNKMVQRAFMAFALFVSFWAVKKVVYLD 980
            GMQLGAEGF +GFLYT+VGLLLAFV+HVLVRV+N  VQR  M FALF+SF AVKKVV LD
Sbjct: 263  GMQLGAEGFAIGFLYTIVGLLLAFVTHVLVRVKNVTVQRVIMLFALFISFLAVKKVVSLD 322

Query: 981  NWKTGYSIHGY 1013
            NWKTGY IH +
Sbjct: 323  NWKTGYGIHAF 333


>ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cucumis sativus]
          Length = 344

 Score =  426 bits (1094), Expect = e-117
 Identities = 209/315 (66%), Positives = 259/315 (82%), Gaps = 5/315 (1%)
 Frame = +3

Query: 84   TESDSDLVQELLHLKSQSKSGIIHLNDISLSRFLTKTRS---YSLLIFFDATQLHDKTEL 254
            + SDSD V ELL L+S+S SG+IHL+D S+SRFLT  +S   YSLLIFFDA QLHDK+EL
Sbjct: 25   SSSDSDRVAELLDLQSRSPSGVIHLDDQSVSRFLTTPKSPRPYSLLIFFDALQLHDKSEL 84

Query: 255  HLKDLRFEYELVATAFSINNKN--TPHETKLFFCDIEFKESQNSFALFGVNALPHVRHVG 428
            HLK+LR E+ LV+++F  NN +  +P  +KLFFC+IEFK+SQ SF+LFGVNALPHVR +G
Sbjct: 85   HLKELRHEFGLVSSSFIANNPDPSSPSRSKLFFCEIEFKQSQPSFSLFGVNALPHVRLIG 144

Query: 429  PRVRNLKDSEAMDQGDFARMAESMSEFVESKTGLTVGPVQRPPFMSSKQIGVIVIGVLLS 608
            P  +  K S+ MDQ D++R+AESM+EFVESKT L VGP+QRPP  S  Q+ V+ I +L+S
Sbjct: 145  PN-QTPKKSDQMDQSDYSRLAESMAEFVESKTSLVVGPIQRPPMFSKNQLVVLFIAMLIS 203

Query: 609  TPFFIKRIMEGNTIFHDRILWLCLSVFVYFFSVSGAMHNIIRKMPMFIADRNDPTKLVFF 788
             PF +K+++ G T+ +DR +WL  ++F+YFFSV+G MHNIIRKMPMF+ DRNDP+KLVFF
Sbjct: 204  APFALKKVIAGETLLNDRKVWLTGAIFIYFFSVAGTMHNIIRKMPMFLTDRNDPSKLVFF 263

Query: 789  YQGNGMQLGAEGFTVGFLYTVVGLLLAFVSHVLVRVRNKMVQRAFMAFALFVSFWAVKKV 968
            YQG+GMQLGAEGF VGFLYT+VGLLLAF++HVLV+VRN  +QR FM  ALFVSFWAVKKV
Sbjct: 264  YQGSGMQLGAEGFAVGFLYTIVGLLLAFMTHVLVKVRNVNIQRVFMIIALFVSFWAVKKV 323

Query: 969  VYLDNWKTGYSIHGY 1013
            VYLDNWKTGY IHGY
Sbjct: 324  VYLDNWKTGYGIHGY 338


>ref|XP_002518526.1| Tumor suppressor candidate, putative [Ricinus communis]
            gi|223542371|gb|EEF43913.1| Tumor suppressor candidate,
            putative [Ricinus communis]
          Length = 349

 Score =  417 bits (1071), Expect = e-114
 Identities = 204/316 (64%), Positives = 252/316 (79%), Gaps = 5/316 (1%)
 Frame = +3

Query: 81   STESDSDLVQELLHLKSQSKSGIIHLNDISLSRFLTKT---RSYSLLIFFDATQLHDKTE 251
            S     DLV ELL L+SQS +G+IHLND S+SRFLT T   R YSLLIFFDA QLH+K E
Sbjct: 28   SASDPQDLVTELLSLQSQSSTGVIHLNDHSISRFLTSTKTPRPYSLLIFFDAKQLHEKAE 87

Query: 252  LHLKDLRFEYELVATAFSINNKNTPHET--KLFFCDIEFKESQNSFALFGVNALPHVRHV 425
            LHL+DL  E+ LVA++F  NN +    +  KLFFCDIEFKESQ++F+LFGVN+LPH+R V
Sbjct: 88   LHLQDLHHEFSLVASSFINNNADQSSASYGKLFFCDIEFKESQSTFSLFGVNSLPHIRLV 147

Query: 426  GPRVRNLKDSEAMDQGDFARMAESMSEFVESKTGLTVGPVQRPPFMSSKQIGVIVIGVLL 605
             P V+N KDS+AMDQGDF+RMAESMS+F+ES+T L+VGP+ RPP +S  Q+   ++ +L+
Sbjct: 148  NPNVKNPKDSDAMDQGDFSRMAESMSDFIESRTKLSVGPIHRPPPISRNQMISAIVCLLI 207

Query: 606  STPFFIKRIMEGNTIFHDRILWLCLSVFVYFFSVSGAMHNIIRKMPMFIADRNDPTKLVF 785
              PF IK+++ G T+ HD  +WL  +VFVYFFSVSGAMHNIIRKMPMF+ADRNDP KL+F
Sbjct: 208  WMPFMIKKLLTGQTLLHDWRIWLSGAVFVYFFSVSGAMHNIIRKMPMFLADRNDPNKLIF 267

Query: 786  FYQGNGMQLGAEGFTVGFLYTVVGLLLAFVSHVLVRVRNKMVQRAFMAFALFVSFWAVKK 965
            FYQG+GMQLGAEGF +GFLYTVVGLLLAF++HVLV V+N  VQR  M  +L +SFWAV K
Sbjct: 268  FYQGSGMQLGAEGFAIGFLYTVVGLLLAFITHVLVMVKNVTVQRFVMVVSLVISFWAVNK 327

Query: 966  VVYLDNWKTGYSIHGY 1013
            V+YLDNWKTGY +H +
Sbjct: 328  VIYLDNWKTGYGVHAF 343


>ref|XP_002888069.1| OST3/OST6 family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333910|gb|EFH64328.1| OST3/OST6 family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score =  416 bits (1069), Expect = e-114
 Identities = 205/314 (65%), Positives = 252/314 (80%), Gaps = 4/314 (1%)
 Frame = +3

Query: 84   TESDSDLVQELLHLKSQSKSGIIHLNDISLSRFLTKT---RSYSLLIFFDATQLHDKTEL 254
            ++SDSDL+ EL+ L+S S+SG+IHL+D  +S+FLT     R YSLL+FFDATQLH K EL
Sbjct: 28   SDSDSDLLNELVSLRSTSESGVIHLDDHGISKFLTSASTPRPYSLLVFFDATQLHSKNEL 87

Query: 255  HLKDLRFEYELVATAFSINNKNTPHETKLFFCDIEFKESQNSFALFGVNALPHVRHVGPR 434
             L++LR E+ +V+ +F  NN N    TKLFFC+IEF +SQ+SF LFGVNALPH+R V P 
Sbjct: 88   RLQELRREFGIVSASFLANN-NGSEGTKLFFCEIEFSQSQSSFQLFGVNALPHIRLVSPS 146

Query: 435  VRNLKD-SEAMDQGDFARMAESMSEFVESKTGLTVGPVQRPPFMSSKQIGVIVIGVLLST 611
            + NL+D S  MDQ D++R+AESM+EFVE +T L VGP+QRPP +S  QIGVIV  ++++T
Sbjct: 147  ISNLRDESGQMDQSDYSRLAESMAEFVEQRTKLKVGPIQRPPLLSKPQIGVIVALIVIAT 206

Query: 612  PFFIKRIMEGNTIFHDRILWLCLSVFVYFFSVSGAMHNIIRKMPMFIADRNDPTKLVFFY 791
            PF IKR+++G TI HD  LWL  ++F+YFFSV+G MHNIIRKMPMF+ DRNDP KLVFFY
Sbjct: 207  PFIIKRVLKGETILHDSRLWLSGAIFIYFFSVAGTMHNIIRKMPMFLQDRNDPNKLVFFY 266

Query: 792  QGNGMQLGAEGFTVGFLYTVVGLLLAFVSHVLVRVRNKMVQRAFMAFALFVSFWAVKKVV 971
            QG+GMQLGAEGF VGFLYTVVGLLLAFV++VLVRV+N   QR  M  ALF+SFWAVKKVV
Sbjct: 267  QGSGMQLGAEGFAVGFLYTVVGLLLAFVTNVLVRVKNLTAQRLIMLLALFISFWAVKKVV 326

Query: 972  YLDNWKTGYSIHGY 1013
            YLDNWKTGY IH Y
Sbjct: 327  YLDNWKTGYGIHPY 340


>ref|NP_176372.1| OST3 and OST6 domain-containing protein [Arabidopsis thaliana]
            gi|75213403|sp|Q9SYB5.1|OST3B_ARATH RecName:
            Full=Probable dolichyl-diphosphooligosaccharide--protein
            glycosyltransferase subunit 3B; Flags: Precursor
            gi|4508079|gb|AAD21423.1| Hypothetical protein
            [Arabidopsis thaliana] gi|332195765|gb|AEE33886.1| OST3
            and OST6 domain-containing protein [Arabidopsis thaliana]
          Length = 346

 Score =  415 bits (1066), Expect = e-113
 Identities = 204/314 (64%), Positives = 252/314 (80%), Gaps = 4/314 (1%)
 Frame = +3

Query: 84   TESDSDLVQELLHLKSQSKSGIIHLNDISLSRFLTKT---RSYSLLIFFDATQLHDKTEL 254
            ++SDSDL+ EL+ L+S S+SG+IHL+D  +S+FLT     R YSLL+FFDATQLH K EL
Sbjct: 28   SDSDSDLLNELVSLRSTSESGVIHLDDHGISKFLTSASTPRPYSLLVFFDATQLHSKNEL 87

Query: 255  HLKDLRFEYELVATAFSINNKNTPHETKLFFCDIEFKESQNSFALFGVNALPHVRHVGPR 434
             L++LR E+ +V+ +F  NN N    TKLFFC+IEF +SQ+SF LFGVNALPH+R V P 
Sbjct: 88   RLQELRREFGIVSASFLANN-NGSEGTKLFFCEIEFSKSQSSFQLFGVNALPHIRLVSPS 146

Query: 435  VRNLKD-SEAMDQGDFARMAESMSEFVESKTGLTVGPVQRPPFMSSKQIGVIVIGVLLST 611
            + NL+D S  MDQ D++R+AESM+EFVE +T L VGP+QRPP +S  QIG+IV  ++++T
Sbjct: 147  ISNLRDESGQMDQSDYSRLAESMAEFVEQRTKLKVGPIQRPPLLSKPQIGIIVALIVIAT 206

Query: 612  PFFIKRIMEGNTIFHDRILWLCLSVFVYFFSVSGAMHNIIRKMPMFIADRNDPTKLVFFY 791
            PF IKR+++G TI HD  LWL  ++F+YFFSV+G MHNIIRKMPMF+ DRNDP KLVFFY
Sbjct: 207  PFIIKRVLKGETILHDTRLWLSGAIFIYFFSVAGTMHNIIRKMPMFLQDRNDPNKLVFFY 266

Query: 792  QGNGMQLGAEGFTVGFLYTVVGLLLAFVSHVLVRVRNKMVQRAFMAFALFVSFWAVKKVV 971
            QG+GMQLGAEGF VGFLYTVVGLLLAFV++VLVRV+N   QR  M  ALF+SFWAVKKVV
Sbjct: 267  QGSGMQLGAEGFAVGFLYTVVGLLLAFVTNVLVRVKNITAQRLIMLLALFISFWAVKKVV 326

Query: 972  YLDNWKTGYSIHGY 1013
            YLDNWKTGY IH Y
Sbjct: 327  YLDNWKTGYGIHPY 340


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