BLASTX nr result

ID: Coptis21_contig00008717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008717
         (1882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005756396.1| serine-rich adhesin for platelets [Staphyloc...    62   5e-07
ref|YP_006196771.1| Serine-rich adhesin for platelets [Staphyloc...    62   7e-07
ref|ZP_13483944.1| serine-rich platelet adhesin [Staphylococcus ...    60   2e-06
ref|ZP_22215907.1| Serine-rich adhesin for platelets [Staphyloco...    60   2e-06
ref|ZP_12533013.1| serine-rich adhesin, platelet-type [Staphyloc...    60   3e-06

>ref|YP_005756396.1| serine-rich adhesin for platelets [Staphylococcus aureus subsp.
            aureus LGA251] gi|344178700|emb|CCC89190.1| serine-rich
            adhesin for platelets [Staphylococcus aureus subsp.
            aureus LGA251]
          Length = 2206

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 116/550 (21%), Positives = 216/550 (39%), Gaps = 8/550 (1%)
 Frame = +2

Query: 74   SNLTSKQQRDVNGNSDSAEANGLTSGSAEPAKSDGLSSRPSGWTAETLGLN-AVRSGNSS 250
            S   S  Q D    S S   +   S SA  A S+ +S   S  T+ ++  + ++ + NS 
Sbjct: 1090 SGSMSTSQSDSTSISTSFSDSTSDSKSASTASSESISQSVSTSTSGSVSTSTSLSTSNSE 1149

Query: 251  HGSLTGNDTMSASL-ESTSPSILTDAPHAVLQVGVLGPRTKSVACLPPRSQLDGESRSHD 427
              S + +D+ S S  ES S S  T    ++ +  +    + S++     S  D ES+S  
Sbjct: 1150 RTSTSMSDSTSLSTSESDSISESTSTSDSISEA-ISASESTSISLSESNSISDSESQSAS 1208

Query: 428  ASDIILVEAQGFSTPGMDNNLMRTDNQQIDLNLNSDLADANGLPMDSNEPVNGLSSKLSG 607
            A    L E+   ST           ++    +++S  + +  L  DS       S+ LS 
Sbjct: 1209 A---FLSESLSVST-----------SESTSESVSSSTSASTSLS-DSTSESGSTSTSLSN 1253

Query: 608  SPAETVDLKAVWSGNSSHAWVSLNGNDTMSAPLERTSLSTLEGASHAVLKDDILDAQTKS 787
            S + +  +    SG++S + V      T  +    TSLS     S + L D    +++ S
Sbjct: 1254 STSGSASISTSTSGSASTSTVKSESVSTSLSTSTSTSLSDSTSLSTS-LSDSTSGSKSNS 1312

Query: 788  ATCLPTTSELDGRKKACDVSAIISV-ETQGFTAQGMHSNVTRTCNQQIDLNGNSHLEDDN 964
             +   +TS+    +K+  +SA  S+ +++  + Q   S+   T     +    S     +
Sbjct: 1313 LSASMSTSDSISTRKSESLSASTSLSDSKSASMQSSESDSQSTSTSLSNSQSTSTSNRMS 1372

Query: 965  GLADGNIEPAKSDGLSSEPSGWTAETLELKVVFSGNSSLDWGLLNGNDTMSSCQERISKS 1144
             +A  ++  + S+  S+  S  T+E+       S + S            +S     S+S
Sbjct: 1373 TIASESVSESTSESGSTSES--TSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRS 1430

Query: 1145 TLADASHAVLQGVLDPQTTSETCLPTMSEFDGEKSRDMLAIIAVEIQGFAEPPQRALDEA 1324
            T A  S ++    LD Q+ S +   + S  D     D ++    +    +     +   +
Sbjct: 1431 TSASTSTSMRTSTLDSQSMSLSTSTSTSVSDSTSLSDSVSDSTSDSTSTSTSGSMSASIS 1490

Query: 1325 LMDVGVNSEILPSELAXXXXXXXXXXXXCDNLPKENQGWDFSDKKSEQGPIIKSESLEWS 1504
            L D    S      ++             ++    ++    SD KS  G    S S+  S
Sbjct: 1491 LSDSTSTSTSASEVMSASISDSQSMSESVNDSESVSESNSESDSKSMSG----STSVSDS 1546

Query: 1505 NELPVNQKMRSS-----SIAAFAAEKAVLPFGKWRNDPCVVNSSAAYVSTHTISEYNLDP 1669
              L V+  +R S     SI+   ++   +      +D   ++ S +  S+ ++SE +   
Sbjct: 1547 GSLSVSTSLRKSESVSESISLSGSQS--MSDSVSTSDSSSLSVSTSQRSSESVSESDSLS 1604

Query: 1670 DSKPSSGSAN 1699
            DSK +SGS +
Sbjct: 1605 DSKSTSGSTS 1614


>ref|YP_006196771.1| Serine-rich adhesin for platelets [Staphylococcus aureus subsp.
            aureus 71193] gi|387603935|ref|YP_005735456.1|
            serine-rich adhesin for platelets (Staphylococcus
            aureussurface protein A) [Staphylococcus aureus subsp.
            aureus ST398] gi|404479980|ref|YP_006711410.1| serine
            rich repeat containing protein [Staphylococcus aureus
            08BA02176] gi|418310423|ref|ZP_12921964.1| serine-rich
            adhesin, platelet-type [Staphylococcus aureus subsp.
            aureus 21331] gi|418979887|ref|ZP_13527677.1| Serine-rich
            adhesin for platelets [Staphylococcus aureus subsp.
            aureus DR10] gi|283471873|emb|CAQ51084.1| serine-rich
            adhesin for platelets (Staphylococcus aureussurface
            protein A) [Staphylococcus aureus subsp. aureus ST398]
            gi|365236723|gb|EHM77604.1| serine-rich adhesin,
            platelet-type [Staphylococcus aureus subsp. aureus 21331]
            gi|379992330|gb|EIA13785.1| Serine-rich adhesin for
            platelets [Staphylococcus aureus subsp. aureus DR10]
            gi|384231681|gb|AFH70928.1| Serine-rich adhesin for
            platelets [Staphylococcus aureus subsp. aureus 71193]
            gi|404441469|gb|AFR74662.1| putative serine rich repeat
            containing protein [Staphylococcus aureus 08BA02176]
          Length = 2279

 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 113/577 (19%), Positives = 218/577 (37%), Gaps = 18/577 (3%)
 Frame = +2

Query: 23   SAAISVKTQGFTNQGIHSNLTSKQQRDVNGN-------SDSAEANGLTSGSAEPAKSDGL 181
            S + S  T  + ++ + ++L++     ++ +       SDSA  +   S SA  + SD +
Sbjct: 1264 STSGSASTSAYKSESVSTSLSTSTSTSLSDSTSLSTSLSDSASGSKSNSLSASMSTSDSI 1323

Query: 182  SSRPSGWTAETLGLNAVRSGNSSHGSLTGNDTMSASLESTSPSIL----TDAPHAVLQVG 349
            S+R S    E+L  +   SG++S        +  +  +STS S+     T    +V    
Sbjct: 1324 STRKS----ESLSTSTSLSGSTSESESGSTSSSESKSDSTSMSLSMSQSTSGSTSVSTSE 1379

Query: 350  VLGPRTK---SVACLPPRSQLDGESRSHDASDIILVEAQGFSTPGMDNNLMRTDNQQIDL 520
             L   T    S++    +S +D  S S   S           +    +   ++ +Q    
Sbjct: 1380 SLSDSTSTSLSLSASMNQSGIDSNSASQSVSASTSTSTSESDSQSTSSYTSQSTSQSEST 1439

Query: 521  NLNSDLADANGLPMDSNEPVN-GLSSKLSGSPAETVDLKAVWSGNSSHAWVSLNGNDTMS 697
            + +  L+D+  +   +++  +   S+ LSGS +E+       S + S +        T  
Sbjct: 1440 STSMSLSDSTSMSRSTSQSGSTSTSASLSGSESESDSQSISTSASESTS----ESTSTSL 1495

Query: 698  APLERTSLSTLEGASHAVLKDDILDAQTKSATCLPTTSELDGRKKACDVSAIISVETQGF 877
            +  E TS ST E  S+A+           S+T L  ++    +    D        +Q  
Sbjct: 1496 SDSESTSNSTSESTSNAISTSASASESDSSSTSLSDSTSASMQSSESD--------SQST 1547

Query: 878  TAQGMHSNVTRTCNQQIDLNGNSHLEDDNGLADGNIEPAKSDGLSSEPSGWTAETLELKV 1057
            +    +S  T T N+   +   S  E  +     +   ++SD  S+  S   +++     
Sbjct: 1548 STSLSNSQSTSTSNRMSTITSESVSESTSESGSTSESTSESDSTSTSLSD--SQSTSRST 1605

Query: 1058 VFSGNSSLDWGLLNGNDTMSSCQERISKSTLADASHAVLQGVLDPQTTSETCLPTMSEFD 1237
              SG++S            +S     S+ST A  S ++    LD Q+ S +   + S  D
Sbjct: 1606 SASGSAS------------TSTSTSDSRSTSASTSTSMRTSTLDSQSMSLSTSTSTSVSD 1653

Query: 1238 GEKSRDMLAIIAVEIQGFAEPPQRALDEALMDVGVNSEILPSELAXXXXXXXXXXXXCDN 1417
                 D ++    +    +     +   +L D    S      ++             + 
Sbjct: 1654 STSLSDSVSDSTSDSTSTSTSGSMSASISLSDSTSTSTSASEVMSVSISDSQSMSESVNY 1713

Query: 1418 LPKENQGWDFSDKKSEQGPIIKSESLEWSNELPVNQKMRSS---SIAAFAAEKAVLPFGK 1588
                ++    SD KS  G    S S+  S  L V+  +R S   S ++  +    +    
Sbjct: 1714 SESVSESNSESDSKSMSG----STSVSDSGSLSVSTSLRKSESVSESSSLSGSQSMSDSV 1769

Query: 1589 WRNDPCVVNSSAAYVSTHTISEYNLDPDSKPSSGSAN 1699
              +D   ++ S +  S+ ++SE +   DSK +SGS +
Sbjct: 1770 STSDSSSLSVSTSLRSSESVSESDSLSDSKSTSGSTS 1806


>ref|ZP_13483944.1| serine-rich platelet adhesin [Staphylococcus aureus subsp. aureus
            CIG1750] gi|377719092|gb|EHT43263.1| serine-rich platelet
            adhesin [Staphylococcus aureus subsp. aureus CIG1750]
          Length = 2253

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 116/587 (19%), Positives = 227/587 (38%), Gaps = 28/587 (4%)
 Frame = +2

Query: 23   SAAISVKTQGFTNQGIHSNL---------------TSKQQRDVNGNSDSAEANGLTSGSA 157
            S +IS  T  F ++ + ++L               TS      +  SDS   +  TS S 
Sbjct: 1264 STSISESTSTFKSESVSTSLSMSTSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMSTSDSI 1323

Query: 158  EPAKSDGLSSRPS--GWTAETLGLNAVRSGNSSHG---SLTGNDTMSASLESTSPSILTD 322
              +KSD +S+  S  G T+E+   +   S + S     S++ + + S S  +++ + L+D
Sbjct: 1324 STSKSDSISTSTSLSGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSD 1383

Query: 323  APHAVLQVGVLGPRTKSVACLPPRSQLDGESRSHDASDIILVEAQGFSTPGMDNNLMRTD 502
            +    L          S++    +S +D  S S  AS+          +        ++ 
Sbjct: 1384 STSTSL----------SLSASMNQSGVDSNSASQSASNSTSTSTSESDSQSTSTYTSQST 1433

Query: 503  NQQIDLNLNSDLADANGLPMDSNEPVN-GLSSKLSGSPAETVDLKAVWSGNSSHAW-VSL 676
            +Q    + ++ L+D+  +   +++  +   S+ LSGS +E+       S + S +   S 
Sbjct: 1434 SQSESTSTSTSLSDSTSISKSTSQSGSTSTSASLSGSESESDSQSISTSASESTSESAST 1493

Query: 677  NGNDTMSAPLERTSLSTLEGASHAVLKDDILDAQTKSATCLPTTSELDGRKKACDVSAII 856
            + +D+ SA    +S ++L  ++ A ++    D+Q+ SA+   + S     + +   S   
Sbjct: 1494 SLSDSASASESDSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLST 1553

Query: 857  SVETQGFTAQGMHSNVTRTCNQQIDLNGNSHLEDDNGLADGNIEPAKSDGLSSEPSGWTA 1036
            SV T   +  G  S  T   +       +S     +  A G+   + S   S   S  T+
Sbjct: 1554 SVST---SESGSTSESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTS 1610

Query: 1037 ETLELKVVFSGNSSLDWGLLNGNDTMSSCQERISKSTLADASHAVLQGVLDPQTTSETCL 1216
             ++      S + SL           +S  + +S ST +D++ A   G +    +     
Sbjct: 1611 TSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDST-SDSTSASTSGSMSVSISLSDST 1669

Query: 1217 PTMSEFDGEKSRDMLAIIAVEIQGFAEPPQRALDEALMDVGVNSEILPSELAXXXXXXXX 1396
             T +              A E+   +    +++ E++ D    SE               
Sbjct: 1670 STSTS-------------ASEVMSASISDSQSMSESVNDSESVSE--------------- 1701

Query: 1397 XXXXCDNLPKENQGWDFSDKKSEQGPII------KSESLEWSNELPVNQKMRSSSIAAFA 1558
                  N   +++    S   S+ G +       KSES+  S+ L  +Q M S S++   
Sbjct: 1702 -----SNSESDSKSMSGSTSVSDSGSLSVSTSLRKSESVSESSSLSGSQSM-SDSVST-- 1753

Query: 1559 AEKAVLPFGKWRNDPCVVNSSAAYVSTHTISEYNLDPDSKPSSGSAN 1699
                        +D   ++ S +  S+ ++SE +   DSK +SGS +
Sbjct: 1754 ------------SDSSSLSVSTSLRSSESVSESDSLSDSKSTSGSTS 1788


>ref|ZP_22215907.1| Serine-rich adhesin for platelets [Staphylococcus aureus subsp.
            aureus LCT-SA112]
          Length = 2235

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 112/573 (19%), Positives = 216/573 (37%), Gaps = 18/573 (3%)
 Frame = +2

Query: 35   SVKTQGFTNQGIHSNLTSKQQRDVNGN-------SDSAEANGLTSGSAEPAKSDGLSSRP 193
            S  T  + +  + ++L++     ++ +       SDSA  +   S SA  + SD +S+R 
Sbjct: 1268 SASTSAYKSDSVSTSLSTSTSTSLSDSTSLSTSLSDSASGSKSNSLSASMSTSDSISTRK 1327

Query: 194  SGWTAETLGLNAVRSGNSSHGSLTGNDTMSASLESTSPSILTD----APHAVLQVGVLGP 361
            S    E+L  +   SG++S        +  +  +STS S+          +V     L  
Sbjct: 1328 S----ESLSTSTSLSGSTSESESGSTSSSESKSDSTSMSLSMSQSISGSTSVSTSESLSD 1383

Query: 362  RTK---SVACLPPRSQLDGESRSHDASDIILVEAQGFSTPGMDNNLMRTDNQQIDLNLNS 532
             T    S++    +S +D  S S  AS           +    +   ++ +Q    + ++
Sbjct: 1384 STSTSLSLSASMNQSGVDSNSASQSASTSTSTSTSESDSQSTSSYTSQSTSQSESTSTST 1443

Query: 533  DLADANGLPMDSNEPVN-GLSSKLSGSPAETVDLKAVWSGNSSHAWVSLNGNDTMSAPLE 709
             L+D+  +   +++  +   S+ LSGS +E+       S + S +        T  +   
Sbjct: 1444 SLSDSTSMSRSTSQSGSTSTSASLSGSESESDSQSISTSASDSTS----ESTSTSLSDST 1499

Query: 710  RTSLSTLEGASHAVLKDDILDAQTKSATCLPTTSELDGRKKACDVSAIISVETQGFTAQG 889
             TS ST E  S A+           S+T L  ++    +    D        +Q  +A  
Sbjct: 1500 STSNSTSESTSKAISTSASASESDSSSTSLSDSTSASMQSSESD--------SQSTSASL 1551

Query: 890  MHSNVTRTCNQQIDLNGNSHLEDDNGLADGNIEPAKSDGLSSEPSGWTAETLELKVVFSG 1069
             +S  T T N+   +   S  E  +     +   ++SD  S+  S   +++       SG
Sbjct: 1552 SNSQSTSTSNRMSTITSESVSESTSESGSTSESTSESDSTSTSLSD--SQSTSRSTSASG 1609

Query: 1070 NSSLDWGLLNGNDTMSSCQERISKSTLADASHAVLQGVLDPQTTSETCLPTMSEFDGEKS 1249
            ++S            +S     S+ST A  S ++    LD Q+ S +   + S  D    
Sbjct: 1610 SAS------------TSTSTSDSRSTSASTSTSMRTSTLDSQSMSLSTSTSTSVSDSTSL 1657

Query: 1250 RDMLAIIAVEIQGFAEPPQRALDEALMDVGVNSEILPSELAXXXXXXXXXXXXCDNLPKE 1429
             D ++    +    +     +   +L D    S      ++             ++    
Sbjct: 1658 SDSVSDSTSDSTSTSTSGSMSASISLSDSTSTSTSASEVMSASISDSQSMSESVNDSESV 1717

Query: 1430 NQGWDFSDKKSEQGPIIKSESLEWSNELPVNQKMRSS---SIAAFAAEKAVLPFGKWRND 1600
            ++    SD KS  G    S S+  S  L V+  +R S   S ++  +    +      +D
Sbjct: 1718 SESNSESDSKSMSG----STSVSDSGSLSVSTSLRKSESVSESSSLSGSQSMSDSVSTSD 1773

Query: 1601 PCVVNSSAAYVSTHTISEYNLDPDSKPSSGSAN 1699
               ++ S +  S+ ++SE +   DSK +SGS +
Sbjct: 1774 SSSLSVSTSQRSSESVSESDSLSDSKSTSGSTS 1806


>ref|ZP_12533013.1| serine-rich adhesin, platelet-type [Staphylococcus aureus subsp.
            aureus 21195] gi|341853845|gb|EGS94724.1| serine-rich
            adhesin, platelet-type [Staphylococcus aureus subsp.
            aureus 21195]
          Length = 2219

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 115/570 (20%), Positives = 220/570 (38%), Gaps = 10/570 (1%)
 Frame = +2

Query: 20   ISAAISVKTQGFTNQGIHSNLTSKQQRDVNGN-SDSAEANGLTSGSAEPAKSDGLSSRPS 196
            IS +IS      T+    ++L++      +G+ S+S  A+  TS S    KS+ LS+  S
Sbjct: 1211 ISTSISGSASTSTSLSDSTSLSTSLSDSASGSKSNSLSASMSTSDSISTRKSESLSTSTS 1270

Query: 197  --GWTAETLGLNAVRSGNSSHG---SLTGNDTMSASLESTSPSILTDAPHAVLQVGVLGP 361
              G T+E+   +   S + S     SL+ + ++S S   ++   L+D+    L       
Sbjct: 1271 LSGSTSESESGSTSSSESKSDSTSMSLSMSQSISGSTSVSTSESLSDSTSTSL------- 1323

Query: 362  RTKSVACLPPRSQLDGESRSHDASDIILVEAQGFSTPGMDNNLMRTDNQQIDLNLNSDLA 541
               S++    +S +D  S S  AS           +    +   ++ +Q    + ++ L+
Sbjct: 1324 ---SLSASMNQSGVDSNSASQSASTSTSTSTSESDSQSTSSYTSQSTSQSESTSTSTSLS 1380

Query: 542  DANGLPMDSNEPVN-GLSSKLSGSPAETVDLKAVWSGNSSHAWVSLNGNDTMSAPLERTS 718
            D+  +   +++  +   S+ LSGS +E+       S + S +        T  +    TS
Sbjct: 1381 DSTSMSRSTSQSGSTSTSASLSGSESESDSQSISTSASDSTS----ESTSTSLSDSTSTS 1436

Query: 719  LSTLEGASHAVLKDDILDAQTKSATCLPTTSELDGRKKACDVSAIISVETQGFTAQGMHS 898
             ST E  S A+           S+T L  ++    +    D        +Q  +A   +S
Sbjct: 1437 NSTSESTSKAISTSASASESDSSSTSLSDSTSASMQSSESD--------SQSTSASLSNS 1488

Query: 899  NVTRTCNQQIDLNGNSHLEDDNGLADGNIEPAKSDGLSSEPSGWTAETLELKVVFSGNSS 1078
              T T N+   +   S  E  +     +   ++SD  S+  S   +++       SG++S
Sbjct: 1489 QSTSTSNRMSTITSESVSESTSESGSTSESTSESDSTSTSLSD--SQSTSRSTSASGSAS 1546

Query: 1079 LDWGLLNGNDTMSSCQERISKSTLADASHAVLQGVLDPQTTSETCLPTMSEFDGEKSRDM 1258
                        +S     S+ST A  S ++    LD Q+ S +   + S  D     D 
Sbjct: 1547 ------------TSTSTSDSRSTSASTSTSMRTSTLDSQSMSLSTSTSTSVSDSTSLSDS 1594

Query: 1259 LAIIAVEIQGFAEPPQRALDEALMDVGVNSEILPSELAXXXXXXXXXXXXCDNLPKENQG 1438
            ++    +    +     +   +L D    S      ++             ++    ++ 
Sbjct: 1595 VSDSTSDSTSTSTSGSMSASISLSDSTSTSTSASEVMSASISDSQSMSESVNDSESVSES 1654

Query: 1439 WDFSDKKSEQGPIIKSESLEWSNELPVNQKMRSS---SIAAFAAEKAVLPFGKWRNDPCV 1609
               SD KS  G    S S+  S  L V+  +R S   S ++  +    +      +D   
Sbjct: 1655 NSESDSKSMSG----STSVSDSGSLSVSTSLRKSESVSESSSLSGSQSMSDSVSTSDSSS 1710

Query: 1610 VNSSAAYVSTHTISEYNLDPDSKPSSGSAN 1699
            ++ S +  S+ ++SE +   DSK +SGS +
Sbjct: 1711 LSVSTSQRSSESVSESDSLSDSKSTSGSTS 1740


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