BLASTX nr result

ID: Coptis21_contig00008698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008698
         (1378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524929.1| chromatin binding protein, putative [Ricinus...   388   e-105
ref|XP_003524665.1| PREDICTED: nuA4 complex subunit EAF3 homolog...   381   e-103
ref|XP_002283618.1| PREDICTED: mortality factor 4-like protein 1...   377   e-102
ref|XP_003550033.1| PREDICTED: nuA4 complex subunit EAF3 homolog...   376   e-102
ref|XP_002866959.1| MRG family protein [Arabidopsis lyrata subsp...   370   e-100

>ref|XP_002524929.1| chromatin binding protein, putative [Ricinus communis]
            gi|223535764|gb|EEF37426.1| chromatin binding protein,
            putative [Ricinus communis]
          Length = 318

 Score =  388 bits (996), Expect = e-105
 Identities = 194/320 (60%), Positives = 247/320 (77%), Gaps = 3/320 (0%)
 Frame = -3

Query: 1346 MGSSNRDN---ESDTDFNEPKTDQESDFIEGEKVLAYHGPCIYKAKVQKVELSREEGKYY 1176
            MGSS++D+   + +T   +        F EGE+VLAYHGP IY+AKVQK EL ++E +Y+
Sbjct: 1    MGSSSKDDSGSDGETSSGDAPPSNSGIFSEGERVLAYHGPRIYEAKVQKAELRKKEWRYF 60

Query: 1175 VHYLGWNKSWDEWVAIDRLLKFTEENIEKQEAQNKKQGGDKNPKSGGRSTQSKPKSSTEA 996
            VHYLGWNK+WDEW+  DRLLK TEEN+ KQ+A  KKQG DK+ K G RS Q+KPK+ST+A
Sbjct: 61   VHYLGWNKNWDEWIGTDRLLKHTEENVVKQQALEKKQGVDKSSKLG-RSAQTKPKTSTDA 119

Query: 995  RAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQLLDDCEYVTQLGKL 816
            + +KED K+ V + KKRK +SG E KD +S  K VK+QIPSTLKKQL+DD E+V Q  KL
Sbjct: 120  KVDKEDAKSNVAKGKKRKSDSGIE-KDNLSAEKLVKIQIPSTLKKQLVDDWEFVIQQDKL 178

Query: 815  VKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKALPIMLLYKKEFQQYR 636
            V+LPR+P VDDI+ KYL+++SKKD ++ +S+GEILKG+R YFDKALP+MLLYKKE  QY 
Sbjct: 179  VRLPRSPNVDDILTKYLEYRSKKDGMMTDSIGEILKGIRCYFDKALPVMLLYKKERHQYD 238

Query: 635  EAIASNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNLHDFLKFLQKSQSTF 456
            +A+ ++ SPST+YGAEHLLRLFVKLPE+L Y NI+EET+ +L Q L DFLKFLQK+QSTF
Sbjct: 239  DAVENDASPSTIYGAEHLLRLFVKLPELLAYVNIEEETLARLQQKLLDFLKFLQKNQSTF 298

Query: 455  FLSTYDVSQGVEANSMEDDD 396
            FLS YD S+  E      D+
Sbjct: 299  FLSAYDGSKVSEGKGKGKDE 318


>ref|XP_003524665.1| PREDICTED: nuA4 complex subunit EAF3 homolog [Glycine max]
          Length = 319

 Score =  381 bits (978), Expect = e-103
 Identities = 194/321 (60%), Positives = 246/321 (76%), Gaps = 4/321 (1%)
 Frame = -3

Query: 1346 MGSSNRDNESDTDFNEPKTDQESD----FIEGEKVLAYHGPCIYKAKVQKVELSREEGKY 1179
            MG+S++DN+S T  +    D +      + EGEKVLAYHGP IY+AKVQK E+ + E KY
Sbjct: 1    MGNSSKDNDSATSADASAGDVQPSNSAVYSEGEKVLAYHGPRIYEAKVQKAEIRKSEWKY 60

Query: 1178 YVHYLGWNKSWDEWVAIDRLLKFTEENIEKQEAQNKKQGGDKNPKSGGRSTQSKPKSSTE 999
            +VHYLGW+K+WDEWV  +RL+K TEEN+ KQ+A +KKQ  DKN KSG RS+Q K KSST+
Sbjct: 61   FVHYLGWSKNWDEWVGEERLMKHTEENVMKQQALDKKQNVDKNVKSG-RSSQGKAKSSTD 119

Query: 998  ARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQLLDDCEYVTQLGK 819
            A+ +KED+KN V + KKRK ++G E K + +  K VK+QIP+TLKKQL+DD + VTQ  K
Sbjct: 120  AKMDKEDVKNNVSKGKKRKHDAGVE-KGSGTVEKLVKIQIPATLKKQLVDDWDSVTQQDK 178

Query: 818  LVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKALPIMLLYKKEFQQY 639
            LVKLPR+P VD+I+ KYL++KSKKD I  +S+GEILKG+R YFDKALP+MLLYKKE +QY
Sbjct: 179  LVKLPRSPTVDEILTKYLEYKSKKDGIAPDSIGEILKGIRCYFDKALPMMLLYKKERKQY 238

Query: 638  REAIASNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNLHDFLKFLQKSQST 459
             +AI  N SPST+YGAEHLLRLFVKLPE+L Y  I+EET+ +L Q L DFLKFLQK+QST
Sbjct: 239  NDAIVDNVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNRLQQKLLDFLKFLQKNQST 298

Query: 458  FFLSTYDVSQGVEANSMEDDD 396
            FFLS YD ++  E      D+
Sbjct: 299  FFLSAYDGTKVSEGKGKGKDE 319


>ref|XP_002283618.1| PREDICTED: mortality factor 4-like protein 1 [Vitis vinifera]
            gi|296087392|emb|CBI33766.3| unnamed protein product
            [Vitis vinifera]
          Length = 321

 Score =  377 bits (968), Expect = e-102
 Identities = 196/318 (61%), Positives = 241/318 (75%), Gaps = 7/318 (2%)
 Frame = -3

Query: 1346 MGSSNRD------NESDTDFNEPKTDQESDFIEGEKVLAYHGPCIYKAKVQKVELSREEG 1185
            MGSSN         ++DT   +        F EGEKVLAYHGP IY+AKVQK E  ++E 
Sbjct: 1    MGSSNTGVKDDSTTDADTSTGDLPASNSGTFSEGEKVLAYHGPRIYEAKVQKAEFRKKEW 60

Query: 1184 KYYVHYLGWNKSWDEWVAIDRLLKFTEENIEKQEAQNKKQGGDKNPKSGGRSTQSKPKSS 1005
            +Y+VHYLGWNK+WDEWV +DRL+K TEEN+ KQ+A +KKQG +KNPKS GRS Q+KPKSS
Sbjct: 61   RYFVHYLGWNKNWDEWVGMDRLMKHTEENVLKQQALDKKQGAEKNPKS-GRSAQAKPKSS 119

Query: 1004 TEARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQLLDDCEYVTQL 825
            T+A+ EKEDLK+YV R K+RK +SG  EKD  ST K VK+ IP+TLKKQL+DD ++VTQ 
Sbjct: 120  TDAKVEKEDLKSYVARGKRRKSDSGI-EKDNASTEKLVKIPIPATLKKQLVDDWDFVTQQ 178

Query: 824  GKLVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKALPIMLLYKKEFQ 645
             KLVKLPR P VD I+ KYL+++ KKD  + + V EIL GLRSYFD+ALP+MLLYKKE Q
Sbjct: 179  DKLVKLPRIPNVDAILIKYLEYRIKKDGTMTDYVAEILNGLRSYFDRALPMMLLYKKERQ 238

Query: 644  QYREAI-ASNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNLHDFLKFLQKS 468
            Q++EAI   + SPSTVYGAEHLLRLFVKLPE+L   NI+EET+  + Q   DFLKFLQK+
Sbjct: 239  QFQEAIYHPDLSPSTVYGAEHLLRLFVKLPELLACVNIEEETLIGMQQKFIDFLKFLQKN 298

Query: 467  QSTFFLSTYDVSQGVEAN 414
            QSTFFLS Y+ S+  E +
Sbjct: 299  QSTFFLSAYEGSKSSEGS 316


>ref|XP_003550033.1| PREDICTED: nuA4 complex subunit EAF3 homolog [Glycine max]
          Length = 319

 Score =  376 bits (966), Expect = e-102
 Identities = 192/321 (59%), Positives = 243/321 (75%), Gaps = 4/321 (1%)
 Frame = -3

Query: 1346 MGSSNRDNESDTDFNEPKTD----QESDFIEGEKVLAYHGPCIYKAKVQKVELSREEGKY 1179
            MG+S++DN+S T  +    D        + EGEKVLAYHGP IY+AKVQK E+ + E KY
Sbjct: 1    MGNSSKDNDSATSADASAGDIPPSNSGVYSEGEKVLAYHGPRIYEAKVQKTEIRKSEWKY 60

Query: 1178 YVHYLGWNKSWDEWVAIDRLLKFTEENIEKQEAQNKKQGGDKNPKSGGRSTQSKPKSSTE 999
            +VHYLGW+K+WDEWV  +RL+K TEEN+ KQ+A +KKQ  DKN KSG RS+Q K K ST+
Sbjct: 61   FVHYLGWSKNWDEWVGEERLMKHTEENVLKQQALDKKQNVDKNVKSG-RSSQGKAKISTD 119

Query: 998  ARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQLLDDCEYVTQLGK 819
            A+ +KED+KN V + KKRK ++G E K + +  K VK+QIP+TLKKQL+DD + VTQ  K
Sbjct: 120  AKMDKEDVKNNVSKGKKRKHDAGVE-KGSGTVEKLVKIQIPATLKKQLVDDWDSVTQQDK 178

Query: 818  LVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKALPIMLLYKKEFQQY 639
            LVKLPR+P VD+IM KYL++KSKKD +  +S+GEILKG+R YFDKALP+MLLYKKE +QY
Sbjct: 179  LVKLPRSPTVDEIMTKYLEYKSKKDGVAPDSIGEILKGIRCYFDKALPMMLLYKKERKQY 238

Query: 638  REAIASNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNLHDFLKFLQKSQST 459
             ++I  N SPST+YGAEHLLRLFVKLPE+L Y  I+EET+ +L Q L DFLKFLQK+QST
Sbjct: 239  NDSIVDNVSPSTIYGAEHLLRLFVKLPELLAYVTIEEETLNRLQQKLLDFLKFLQKNQST 298

Query: 458  FFLSTYDVSQGVEANSMEDDD 396
            FFLS YD  +  E      D+
Sbjct: 299  FFLSAYDGPKVPEGKGKGKDE 319


>ref|XP_002866959.1| MRG family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297312795|gb|EFH43218.1| MRG family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 320

 Score =  370 bits (951), Expect = e-100
 Identities = 191/322 (59%), Positives = 245/322 (76%), Gaps = 5/322 (1%)
 Frame = -3

Query: 1346 MGSSNRDNE-SDTDFNEPKTDQESD---FIEGEKVLAYHGPCIYKAKVQKVELSREEGKY 1179
            MGSS+++   SD D         +D   F EGE+VLAYHGP +Y AKVQKVEL ++E KY
Sbjct: 1    MGSSSKEETASDGDTASGGASPSNDGRLFSEGERVLAYHGPRVYGAKVQKVELRKKEWKY 60

Query: 1178 YVHYLGWNKSWDEWVAIDRLLKFTEENIEKQEAQNKKQGGDKNPKSGGRSTQSKPKSSTE 999
            +VHYLGWNK+WDEWV+ DRLLK TEEN+ KQ+A +KKQG +K  KSG RS Q+K +SS +
Sbjct: 61   FVHYLGWNKNWDEWVSADRLLKHTEENLVKQKALDKKQGVEKGTKSG-RSAQTKTRSSAD 119

Query: 998  ARAEKEDLKNYVGRNKKRKVESGTEEKDTVSTNKHVKVQIPSTLKKQLLDDCEYVTQLGK 819
             +A+K+D K    + KKRK +SG E KD VS  K +K+QIP+TLKKQL+DD EY+ Q  K
Sbjct: 120  TKADKDDTKTNAAKGKKRKHDSGNE-KDNVSAEKLMKIQIPATLKKQLIDDWEYIAQKDK 178

Query: 818  LVKLPRAPCVDDIMKKYLDHKSKKDAIIGESVGEILKGLRSYFDKALPIMLLYKKEFQQY 639
            +VKLPR+P VD+I+ KYL+ K+KKD +I +SV EILKG+RSYFDKALP+MLLYKKE +QY
Sbjct: 179  VVKLPRSPNVDEILAKYLEFKTKKDGMITDSVAEILKGIRSYFDKALPVMLLYKKERRQY 238

Query: 638  REAIASNTSPSTVYGAEHLLRLFVKLPEMLTYANIDEETMTQLLQNLHDFLKFLQKSQST 459
            +E+I  +TSPSTVYGAEHLLRLFVKLPE+L+Y N++EET +++ Q L DFLKF+QK+Q+T
Sbjct: 239  QESIVDDTSPSTVYGAEHLLRLFVKLPELLSYVNMEEETWSRMQQTLSDFLKFIQKNQNT 298

Query: 458  FFL-STYDVSQGVEANSMEDDD 396
            F L S YD  +  +      DD
Sbjct: 299  FLLPSAYDSDKVSDGKGKGKDD 320


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