BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008691
         (1571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28722.3| unnamed protein product [Vitis vinifera]              604   e-170
ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containi...   604   e-170
ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|2...   566   e-159
ref|XP_002524751.1| pentatricopeptide repeat-containing protein,...   549   e-154
ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containi...   535   e-149

>emb|CBI28722.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  604 bits (1557), Expect = e-170
 Identities = 299/385 (77%), Positives = 339/385 (88%)
 Frame = -2

Query: 1570 SDVLKHPILVESSDLSYEEFCRDRNYVGLEAEAKETLGILLENLQKRVELVTSECGILQP 1391
            SD L++     S  +SYEEF RDRN++ LEAEAKE L  LL  LQ +VE +T+E GILQP
Sbjct: 967  SDGLENARPNTSLSISYEEFSRDRNFLKLEAEAKEILDRLLAKLQMQVEFITTERGILQP 1026

Query: 1390 TEKIYAKLVKSFFEAGKVKELAEFLIKADKEDVPVAIENSAVVHVISACISLGWLDQAHD 1211
            TE+IY KLVK+F EAGK K+LAEFLIKA+KED PV+ +NSA+VHVI++CI LGWLDQAHD
Sbjct: 1027 TERIYVKLVKAFLEAGKTKQLAEFLIKAEKEDSPVSTDNSALVHVINSCILLGWLDQAHD 1086

Query: 1210 LIDEMRFAGIRTGSSVYSALLKAYCKENRPLEISSLLRDARKEGIQLDSSCYEALIQSRV 1031
            L+DEMR AG+RTGSSVYS+LLKAYCK NR  EI+SLLRDARK G+QLDSSCYEALIQSRV
Sbjct: 1087 LLDEMRLAGVRTGSSVYSSLLKAYCKANRAGEITSLLRDARKAGVQLDSSCYEALIQSRV 1146

Query: 1030 VQKDTQGALHLFKEMKETKISKSCHEEFDMLVKGCAECGEAGVMAKLLQEIKEGQRADCG 851
            +QKDT+GALH+FKEMKE KI +S H EF+MLVKGCAE GEAG+MAKLL EIKE QR DCG
Sbjct: 1147 LQKDTEGALHVFKEMKEAKIPRSGHREFEMLVKGCAESGEAGLMAKLLHEIKEEQRVDCG 1206

Query: 850  VHEWNSVIHFFSKKRLMQDAEKALKKMRALGHTPNAQTFHSLVTGYAAIGGKYIEVTELW 671
            VH+WN+VIHFF +KRLMQDAEKALKKMR+LGH PNAQTFHS+VTGYAAIGGKY+EVTELW
Sbjct: 1207 VHDWNNVIHFFCRKRLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYVEVTELW 1266

Query: 670  GEMKDLASSSSMKFDQELLDSVLYTFVRGGFFLRANEVVEKMEAGDMFIDKYKYRTIFLK 491
            GEMK  ASSSSMKFDQELLD+VLYTFVRGGFF+RANEVVE ME G MFIDKYKYRT+FLK
Sbjct: 1267 GEMKSFASSSSMKFDQELLDAVLYTFVRGGFFVRANEVVEMMERGKMFIDKYKYRTLFLK 1326

Query: 490  YHKTLYKKKNPKIQTEAQFKRREAA 416
            YHKTLYK K PK+QTEAQF+RR+AA
Sbjct: 1327 YHKTLYKSKPPKVQTEAQFRRRDAA 1351


>ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
            mitochondrial-like [Vitis vinifera]
          Length = 784

 Score =  604 bits (1557), Expect = e-170
 Identities = 299/385 (77%), Positives = 339/385 (88%)
 Frame = -2

Query: 1570 SDVLKHPILVESSDLSYEEFCRDRNYVGLEAEAKETLGILLENLQKRVELVTSECGILQP 1391
            SD L++     S  +SYEEF RDRN++ LEAEAKE L  LL  LQ +VE +T+E GILQP
Sbjct: 390  SDGLENARPNTSLSISYEEFSRDRNFLKLEAEAKEILDRLLAKLQMQVEFITTERGILQP 449

Query: 1390 TEKIYAKLVKSFFEAGKVKELAEFLIKADKEDVPVAIENSAVVHVISACISLGWLDQAHD 1211
            TE+IY KLVK+F EAGK K+LAEFLIKA+KED PV+ +NSA+VHVI++CI LGWLDQAHD
Sbjct: 450  TERIYVKLVKAFLEAGKTKQLAEFLIKAEKEDSPVSTDNSALVHVINSCILLGWLDQAHD 509

Query: 1210 LIDEMRFAGIRTGSSVYSALLKAYCKENRPLEISSLLRDARKEGIQLDSSCYEALIQSRV 1031
            L+DEMR AG+RTGSSVYS+LLKAYCK NR  EI+SLLRDARK G+QLDSSCYEALIQSRV
Sbjct: 510  LLDEMRLAGVRTGSSVYSSLLKAYCKANRAGEITSLLRDARKAGVQLDSSCYEALIQSRV 569

Query: 1030 VQKDTQGALHLFKEMKETKISKSCHEEFDMLVKGCAECGEAGVMAKLLQEIKEGQRADCG 851
            +QKDT+GALH+FKEMKE KI +S H EF+MLVKGCAE GEAG+MAKLL EIKE QR DCG
Sbjct: 570  LQKDTEGALHVFKEMKEAKIPRSGHREFEMLVKGCAESGEAGLMAKLLHEIKEEQRVDCG 629

Query: 850  VHEWNSVIHFFSKKRLMQDAEKALKKMRALGHTPNAQTFHSLVTGYAAIGGKYIEVTELW 671
            VH+WN+VIHFF +KRLMQDAEKALKKMR+LGH PNAQTFHS+VTGYAAIGGKY+EVTELW
Sbjct: 630  VHDWNNVIHFFCRKRLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYVEVTELW 689

Query: 670  GEMKDLASSSSMKFDQELLDSVLYTFVRGGFFLRANEVVEKMEAGDMFIDKYKYRTIFLK 491
            GEMK  ASSSSMKFDQELLD+VLYTFVRGGFF+RANEVVE ME G MFIDKYKYRT+FLK
Sbjct: 690  GEMKSFASSSSMKFDQELLDAVLYTFVRGGFFVRANEVVEMMERGKMFIDKYKYRTLFLK 749

Query: 490  YHKTLYKKKNPKIQTEAQFKRREAA 416
            YHKTLYK K PK+QTEAQF+RR+AA
Sbjct: 750  YHKTLYKSKPPKVQTEAQFRRRDAA 774


>ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|222856234|gb|EEE93781.1|
            predicted protein [Populus trichocarpa]
          Length = 750

 Score =  566 bits (1459), Expect = e-159
 Identities = 280/371 (75%), Positives = 325/371 (87%)
 Frame = -2

Query: 1528 LSYEEFCRDRNYVGLEAEAKETLGILLENLQKRVELVTSECGILQPTEKIYAKLVKSFFE 1349
            +SYEEF RDRN++ L+ EAKE L  LL  LQ +VEL+T+E GILQPTEKIY KLVK+F E
Sbjct: 370  ISYEEFYRDRNFLKLDTEAKEVLSTLLVELQMQVELITTERGILQPTEKIYVKLVKAFLE 429

Query: 1348 AGKVKELAEFLIKADKEDVPVAIENSAVVHVISACISLGWLDQAHDLIDEMRFAGIRTGS 1169
            +GK KELA FLIKA+KED P + ++SA+VHVI++CISLGWLDQAHDL+DEM  AGIRT S
Sbjct: 430  SGKTKELAAFLIKAEKEDSPASNDDSALVHVINSCISLGWLDQAHDLLDEMCLAGIRTSS 489

Query: 1168 SVYSALLKAYCKENRPLEISSLLRDARKEGIQLDSSCYEALIQSRVVQKDTQGALHLFKE 989
            SVY++LLKAYCK N+  E+++LLRDAR+ GIQLDSS Y ALI+ RV+QKDT+ ALH+FKE
Sbjct: 490  SVYASLLKAYCKANQTGEVTALLRDARRAGIQLDSSSYNALIEFRVIQKDTKEALHIFKE 549

Query: 988  MKETKISKSCHEEFDMLVKGCAECGEAGVMAKLLQEIKEGQRADCGVHEWNSVIHFFSKK 809
            MKE KI ++ H+EF+MLVKGCAE GEAG+MAKLLQEIKE Q AD GVH+WN+VIHFF KK
Sbjct: 550  MKEAKIPRTGHQEFEMLVKGCAEGGEAGLMAKLLQEIKEEQAADSGVHDWNNVIHFFCKK 609

Query: 808  RLMQDAEKALKKMRALGHTPNAQTFHSLVTGYAAIGGKYIEVTELWGEMKDLASSSSMKF 629
            RLMQDAEKALKKMR+LGH PNAQTFHS+VTGYAAIGGKYIEVTELWGEMK +AS++SMKF
Sbjct: 610  RLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYIEVTELWGEMKSIASATSMKF 669

Query: 628  DQELLDSVLYTFVRGGFFLRANEVVEKMEAGDMFIDKYKYRTIFLKYHKTLYKKKNPKIQ 449
            DQELLDSVLYTFVRGGFF RANEVV+ ME G MFIDKYKYRT++LKYHKTLYK K PKIQ
Sbjct: 670  DQELLDSVLYTFVRGGFFSRANEVVDMMEKGKMFIDKYKYRTLYLKYHKTLYKGKTPKIQ 729

Query: 448  TEAQFKRREAA 416
            TE+  K+REAA
Sbjct: 730  TESLVKKREAA 740


>ref|XP_002524751.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535935|gb|EEF37594.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 787

 Score =  549 bits (1414), Expect = e-154
 Identities = 269/371 (72%), Positives = 323/371 (87%)
 Frame = -2

Query: 1528 LSYEEFCRDRNYVGLEAEAKETLGILLENLQKRVELVTSECGILQPTEKIYAKLVKSFFE 1349
            +S+ EF +DR+++ L+AEAK  L  LL  LQ +VEL+T++ GILQPTEK+Y KLVK+F E
Sbjct: 407  ISHGEFLKDRDFLKLDAEAKGLLDSLLAKLQTQVELITTDRGILQPTEKVYVKLVKAFLE 466

Query: 1348 AGKVKELAEFLIKADKEDVPVAIENSAVVHVISACISLGWLDQAHDLIDEMRFAGIRTGS 1169
            +GK KELA FL KA+KED P + ++S +VHVI++CISL WLDQAHDL+DEMR AG+R  S
Sbjct: 467  SGKTKELAAFLYKAEKEDSPSSNDDSPLVHVINSCISLDWLDQAHDLLDEMRVAGVRMSS 526

Query: 1168 SVYSALLKAYCKENRPLEISSLLRDARKEGIQLDSSCYEALIQSRVVQKDTQGALHLFKE 989
            SVY++LLKAYCK NR  E+ +LLRDARK GIQLDSSCY ALI+SRV+++DTQGALHLFKE
Sbjct: 527  SVYASLLKAYCKANRAGEVKALLRDARKAGIQLDSSCYGALIKSRVLEEDTQGALHLFKE 586

Query: 988  MKETKISKSCHEEFDMLVKGCAECGEAGVMAKLLQEIKEGQRADCGVHEWNSVIHFFSKK 809
            MK+ KI ++ ++EF+MLVKGCA+ GEAG++AKLL+EI+EGQ  D GVH+WN VIHFF KK
Sbjct: 587  MKDAKIPRAGNQEFEMLVKGCADDGEAGLLAKLLREIREGQTVDSGVHDWNYVIHFFCKK 646

Query: 808  RLMQDAEKALKKMRALGHTPNAQTFHSLVTGYAAIGGKYIEVTELWGEMKDLASSSSMKF 629
            RLMQDAEKALKKMR+LGH PNAQTFHS+VTGYAAIGGKY+EVTELWGEMK +AS++SMKF
Sbjct: 647  RLMQDAEKALKKMRSLGHAPNAQTFHSMVTGYAAIGGKYVEVTELWGEMKSIASATSMKF 706

Query: 628  DQELLDSVLYTFVRGGFFLRANEVVEKMEAGDMFIDKYKYRTIFLKYHKTLYKKKNPKIQ 449
            DQELLDSVLYTFVRGGFF RANEVV  ME  +MFIDKYKYRT+FLKYHKTLYK K+PKIQ
Sbjct: 707  DQELLDSVLYTFVRGGFFSRANEVVAMMEKVEMFIDKYKYRTLFLKYHKTLYKGKSPKIQ 766

Query: 448  TEAQFKRREAA 416
            TEAQ ++REAA
Sbjct: 767  TEAQARKREAA 777


>ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
            mitochondrial-like [Cucumis sativus]
            gi|449503826|ref|XP_004162196.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g03100,
            mitochondrial-like [Cucumis sativus]
          Length = 796

 Score =  535 bits (1379), Expect = e-149
 Identities = 268/383 (69%), Positives = 318/383 (83%)
 Frame = -2

Query: 1570 SDVLKHPILVESSDLSYEEFCRDRNYVGLEAEAKETLGILLENLQKRVELVTSECGILQP 1391
            +D LK  I      + +++F  D+N++ L+ EAKE L  LL  LQ +VELVT+E GILQP
Sbjct: 403  NDGLKDKIS-NGKSIFFDDFVLDKNFLKLDIEAKEILRTLLTKLQLQVELVTTERGILQP 461

Query: 1390 TEKIYAKLVKSFFEAGKVKELAEFLIKADKEDVPVAIENSAVVHVISACISLGWLDQAHD 1211
            TE I  KLV++F EAGK K+LA+FLIKA++E+ PV+ ++S +VHVI+ACISLGWLDQAHD
Sbjct: 462  TEAILVKLVRAFLEAGKTKDLAQFLIKAEREESPVSNDDSVLVHVINACISLGWLDQAHD 521

Query: 1210 LIDEMRFAGIRTGSSVYSALLKAYCKENRPLEISSLLRDARKEGIQLDSSCYEALIQSRV 1031
            L+DEM  AG+RTGSSVY +LLKAYCK NR  E++SLLRDARK GIQLDSSCY+ALI SRV
Sbjct: 522  LLDEMHLAGVRTGSSVYGSLLKAYCKANRTREVASLLRDARKAGIQLDSSCYDALINSRV 581

Query: 1030 VQKDTQGALHLFKEMKETKISKSCHEEFDMLVKGCAECGEAGVMAKLLQEIKEGQRADCG 851
            +Q D +GAL  F+EMKE KI +S H+EF  LV+  AE  EAG+MAKLLQEIK+GQR D G
Sbjct: 582  LQNDNKGALKFFQEMKEAKIPRSGHQEFRRLVEKSAENDEAGLMAKLLQEIKDGQRVDYG 641

Query: 850  VHEWNSVIHFFSKKRLMQDAEKALKKMRALGHTPNAQTFHSLVTGYAAIGGKYIEVTELW 671
            +H+WN+VIHFF KKRLMQDAEKALKKMR+LGH PNAQTFHS+VTGYAAIGGKY+EVTELW
Sbjct: 642  LHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHCPNAQTFHSMVTGYAAIGGKYVEVTELW 701

Query: 670  GEMKDLASSSSMKFDQELLDSVLYTFVRGGFFLRANEVVEKMEAGDMFIDKYKYRTIFLK 491
            GEMK +AS+S +KFDQELLDSVLYTFVRGGFF RANEVVE ME   MFIDKYKYRT+FLK
Sbjct: 702  GEMKSIASASFLKFDQELLDSVLYTFVRGGFFARANEVVEVMEKDKMFIDKYKYRTLFLK 761

Query: 490  YHKTLYKKKNPKIQTEAQFKRRE 422
            YH+TLYK K PK QTEAQ ++RE
Sbjct: 762  YHRTLYKGKAPKFQTEAQLRKRE 784