BLASTX nr result
ID: Coptis21_contig00008678
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00008678
(1284 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002298299.1| predicted protein [Populus trichocarpa] gi|2... 357 5e-96
ref|XP_002313361.1| predicted protein [Populus trichocarpa] gi|2... 356 6e-96
gb|EEC68380.1| hypothetical protein OsI_36525 [Oryza sativa Indi... 350 3e-94
ref|NP_001068115.1| Os11g0568600 [Oryza sativa Japonica Group] g... 350 3e-94
ref|XP_002513537.1| thump domain protein, putative [Ricinus comm... 349 8e-94
>ref|XP_002298299.1| predicted protein [Populus trichocarpa] gi|222845557|gb|EEE83104.1|
predicted protein [Populus trichocarpa]
Length = 379
Score = 357 bits (915), Expect = 5e-96
Identities = 194/371 (52%), Positives = 248/371 (66%), Gaps = 28/371 (7%)
Frame = +2
Query: 107 RYLPYSKSVKK-GSYPLRPGVQGFFLTCDGGRERQASNEAINVLDTFYEQLVDGEASSIK 283
RYLP++K VKK GSYPL PGVQGFF+TCDGGRERQAS EAINV+D+FYE+LV G+ +S+K
Sbjct: 23 RYLPHNKPVKKKGSYPLHPGVQGFFITCDGGRERQASREAINVIDSFYEELVFGKDTSVK 82
Query: 284 HAVQPSTPLNKKITFXXXXXXXXXXXXAQIKEEDTNQEKETS--EAGDTPSKKQ------ 439
A P+ P+NKKI F + EED E ++ EA D ++
Sbjct: 83 LAELPNKPINKKIKFSYSDVEGDDDEEKEEDEEDGLDENKSGAPEANDAKNENPADEKLG 142
Query: 440 --CLETIAP-----------------KEEEANHEDQTSEKQCLETTAQKEEEANLEDQTS 562
CLE + K++E+ E+ ++K+C ET A K ++ S
Sbjct: 143 SPCLENESSECQRREKTNQEEGCKNDKKQESEAEELPAKKKCTETCAPKSVGQEKVEEKS 202
Query: 563 KLESVVNDEPVXXXXXXXXXXXXXXXXXRSKRRFVSLDPGCNGVAFVQMLKRDGDPGPAD 742
++ ++ DE ++KR F+SLD GCNGV FVQM K DGDP P D
Sbjct: 203 -IDKLIEDE-------------LKELGDKNKRHFLSLDSGCNGVVFVQMRKIDGDPCPKD 248
Query: 743 IVKHMMMSAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAEAETPLKFA 922
IV+HMM SAA+TRKHMSRFILRVLP+E+ CYASE+EISRAI P++E+YFP + + P KFA
Sbjct: 249 IVQHMMTSAASTRKHMSRFILRVLPIEVACYASEDEISRAIAPVVEKYFPVDTQDPQKFA 308
Query: 923 VLYDARANTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGVVEKYKELS 1102
V+Y+ARAN+GI+RM II +VAK VPGPHKVDL+NPDK+I+V+I KT+C IGV+EKYKELS
Sbjct: 309 VMYEARANSGIDRMKIINSVAKCVPGPHKVDLSNPDKTIVVEIVKTLCLIGVIEKYKELS 368
Query: 1103 KYNLRQLTSPK 1135
KYNLRQLTS K
Sbjct: 369 KYNLRQLTSSK 379
>ref|XP_002313361.1| predicted protein [Populus trichocarpa] gi|222849769|gb|EEE87316.1|
predicted protein [Populus trichocarpa]
Length = 378
Score = 356 bits (914), Expect = 6e-96
Identities = 188/355 (52%), Positives = 240/355 (67%), Gaps = 12/355 (3%)
Frame = +2
Query: 110 YLPYSKSV-KKGSYPLRPGVQGFFLTCDGGRERQASNEAINVLDTFYEQLVDGEASSIKH 286
YLP++K V KKGSYPL PGVQGFF+TCDGGRERQAS EAINV+D+FYE+L G+ +S+K
Sbjct: 24 YLPHNKPVRKKGSYPLHPGVQGFFITCDGGRERQASREAINVIDSFYEELAYGKDTSVKL 83
Query: 287 AVQPSTPLNKKITFXXXXXXXXXXXXAQIKEEDTNQEKETSEAGDTPSKKQCLETI-APK 463
A P P NKKI F ++ + + E E D + + + +P
Sbjct: 84 ADFPDKPTNKKIKFSYSDDEGDGEEDDDEEDGEDENKSEAPEGNDAMNDNPTDKKVGSPT 143
Query: 464 EEEANHEDQTSEKQCLETTAQKEEEANLE----------DQTSKLESVVNDEPVXXXXXX 613
E N E+QT EK E + +E+ E +T ++VV ++
Sbjct: 144 VENENSENQTEEKTNQEEGCKNDEKQANEAEGPPAKKKCTETCAPKTVVQEKVEEKSIDR 203
Query: 614 XXXXXXXXXXXRSKRRFVSLDPGCNGVAFVQMLKRDGDPGPADIVKHMMMSAAATRKHMS 793
++KRRF+SLD GCNGVAF+QM K DGDP P DIV+H+M SAA+TRKHMS
Sbjct: 204 LIEDELKELGDKNKRRFLSLDSGCNGVAFIQMRKIDGDPCPKDIVQHIMTSAASTRKHMS 263
Query: 794 RFILRVLPVELTCYASEEEISRAIKPLIEQYFPAEAETPLKFAVLYDARANTGIERMAII 973
RFI+R+LP+E+ CYASEEEISRAI P++E+YFP + + PLKFAV+Y+ARAN+GI+RM II
Sbjct: 264 RFIIRMLPIEVACYASEEEISRAIAPVVEKYFPVDTQDPLKFAVMYEARANSGIDRMKII 323
Query: 974 KAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGVVEKYKELSKYNLRQLTSPKE 1138
+VAK VPGPHKVDL NPDK+I+V+I KTVC IGV+EKYKELSKYNLRQLTS K+
Sbjct: 324 NSVAKSVPGPHKVDLGNPDKTIVVEIVKTVCLIGVIEKYKELSKYNLRQLTSSKQ 378
>gb|EEC68380.1| hypothetical protein OsI_36525 [Oryza sativa Indica Group]
Length = 374
Score = 350 bits (899), Expect = 3e-94
Identities = 188/361 (52%), Positives = 240/361 (66%), Gaps = 17/361 (4%)
Frame = +2
Query: 107 RYLPYSKSVKKGSYPLRPGVQGFFLTCDGGRERQASNEAINVLDTFYEQLVDGEASSIKH 286
+YLP+ K V+KG+YPLRPGVQGFFLTCDGGRERQA+ EA+++LD+FYE LVDG+ S K
Sbjct: 24 KYLPHGKPVRKGAYPLRPGVQGFFLTCDGGRERQATREALSLLDSFYEDLVDGKGSDGKP 83
Query: 287 AVQPSTPLNKKITFXXXXXXXXXXXXAQIKEED-----TNQEKETSEAGDTPSKKQCLET 451
P PLNKKITF + +EED T+ + TPS++Q +
Sbjct: 84 KSIPDKPLNKKITFVDSDS-------SDDEEEDHSGEVTDDTNNADKGETTPSEQQKEVS 136
Query: 452 IAPKEEEANHEDQTSEKQCLETTAQKEEEANLEDQTSKLESV------------VNDEPV 595
P ++E+QT + Q+ ++ + +QT E ND+P+
Sbjct: 137 DTPVVPSKDNEEQTDNADESKLKKQRVQDPPISEQTEPKEPTDKPTESTDKPKGSNDKPI 196
Query: 596 XXXXXXXXXXXXXXXXXRSKRRFVSLDPGCNGVAFVQMLKRDGDPGPADIVKHMMMSAAA 775
R KR F +LD GCNG F+QM KRDGDPGP +IV++MM SAA+
Sbjct: 197 DDLIDEDLKELGD----RKKRLFATLDSGCNGCIFIQMHKRDGDPGPVEIVQNMMSSAAS 252
Query: 776 TRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAEAETPLKFAVLYDARANTGI 955
TRKHMSRFILR LP E+TCYASEEEI++AI PL+E+YFP E+ + KFAVLY+AR+NTGI
Sbjct: 253 TRKHMSRFILRFLPTEVTCYASEEEITKAISPLVEKYFPKESSSVYKFAVLYEARSNTGI 312
Query: 956 ERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGVVEKYKELSKYNLRQLTSPK 1135
+RM II AVAK VP PHKVDL++PD++IIVQIAKT+C IGVVE+YKEL+K+NLRQLTSP
Sbjct: 313 DRMKIINAVAKSVPQPHKVDLSSPDRTIIVQIAKTICMIGVVERYKELAKFNLRQLTSPP 372
Query: 1136 E 1138
E
Sbjct: 373 E 373
>ref|NP_001068115.1| Os11g0568600 [Oryza sativa Japonica Group]
gi|108864519|gb|ABA94316.2| THUMP domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113645337|dbj|BAF28478.1| Os11g0568600 [Oryza sativa
Japonica Group] gi|215768400|dbj|BAH00629.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222616171|gb|EEE52303.1| hypothetical protein
OsJ_34303 [Oryza sativa Japonica Group]
Length = 374
Score = 350 bits (899), Expect = 3e-94
Identities = 188/361 (52%), Positives = 240/361 (66%), Gaps = 17/361 (4%)
Frame = +2
Query: 107 RYLPYSKSVKKGSYPLRPGVQGFFLTCDGGRERQASNEAINVLDTFYEQLVDGEASSIKH 286
+YLP+ K V+KG+YPLRPGVQGFFLTCDGGRERQA+ EA+++LD+FYE LVDG+ S K
Sbjct: 24 KYLPHGKPVRKGAYPLRPGVQGFFLTCDGGRERQATREALSLLDSFYEDLVDGKGSDGKP 83
Query: 287 AVQPSTPLNKKITFXXXXXXXXXXXXAQIKEED-----TNQEKETSEAGDTPSKKQCLET 451
P PLNKKITF + +EED T+ + TPS++Q +
Sbjct: 84 KSIPDKPLNKKITFADSDS-------SDDEEEDHSGEVTDDTNNADKGETTPSEQQKEVS 136
Query: 452 IAPKEEEANHEDQTSEKQCLETTAQKEEEANLEDQTSKLESV------------VNDEPV 595
P ++E+QT + Q+ ++ + +QT E ND+P+
Sbjct: 137 DTPVVPSKDNEEQTDNADESKLKKQRVQDPPISEQTEPKEPTDKPTESTDKPKGSNDKPI 196
Query: 596 XXXXXXXXXXXXXXXXXRSKRRFVSLDPGCNGVAFVQMLKRDGDPGPADIVKHMMMSAAA 775
R KR F +LD GCNG F+QM KRDGDPGP +IV++MM SAA+
Sbjct: 197 DDLIDEDLKELGD----RKKRLFATLDSGCNGCIFIQMHKRDGDPGPVEIVQNMMSSAAS 252
Query: 776 TRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAEAETPLKFAVLYDARANTGI 955
TRKHMSRFILR LP E+TCYASEEEI++AI PL+E+YFP E+ + KFAVLY+AR+NTGI
Sbjct: 253 TRKHMSRFILRFLPTEVTCYASEEEITKAISPLVEKYFPKESSSVYKFAVLYEARSNTGI 312
Query: 956 ERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGVVEKYKELSKYNLRQLTSPK 1135
+RM II AVAK VP PHKVDL++PD++IIVQIAKT+C IGVVE+YKEL+K+NLRQLTSP
Sbjct: 313 DRMKIINAVAKSVPQPHKVDLSSPDRTIIVQIAKTICMIGVVERYKELAKFNLRQLTSPP 372
Query: 1136 E 1138
E
Sbjct: 373 E 373
>ref|XP_002513537.1| thump domain protein, putative [Ricinus communis]
gi|223547445|gb|EEF48940.1| thump domain protein,
putative [Ricinus communis]
Length = 382
Score = 349 bits (896), Expect = 8e-94
Identities = 190/364 (52%), Positives = 238/364 (65%), Gaps = 21/364 (5%)
Frame = +2
Query: 107 RYLPYSKSVKK-GSYPLRPGVQGFFLTCDGGRERQASNEAINVLDTFYEQLVDGEASSIK 283
RYLP++K VKK GSYPL PGVQGFF+TCDGGRERQAS+EAINV+D+FYE+LV + +S+K
Sbjct: 20 RYLPHNKPVKKKGSYPLHPGVQGFFITCDGGRERQASHEAINVIDSFYEELVHAKDTSVK 79
Query: 284 HAVQPSTPLNKKITFXXXXXXXXXXXXAQIKEEDTNQEKETSEAGDTPSKKQ-------- 439
+ P P +KKI F EE+ ++E E G+ KQ
Sbjct: 80 LEL-PKKPSSKKIKFVYSDDEEDDDDNGVEGEEEEEDKEEDKEEGNKSDTKQNNDDKNDN 138
Query: 440 -CLETIA-PKEEEANHEDQTSEKQCLETTAQKEEEANLED----------QTSKLESVVN 583
E + P ++ + +QT + C K+E E +T SVV+
Sbjct: 139 PANEKLEFPNVDKTCNGNQTEKNTCDNEAGGKDEHQTNETDEPPAKKQIIETCVSSSVVH 198
Query: 584 DEPVXXXXXXXXXXXXXXXXXRSKRRFVSLDPGCNGVAFVQMLKRDGDPGPADIVKHMMM 763
++ +SKRRF +LD GCNGV FVQM KRDGDP P DI +H+M
Sbjct: 199 EKVEQRSIDKLIEDELKELGDKSKRRFTNLDSGCNGVVFVQMRKRDGDPSPKDIAQHIMT 258
Query: 764 SAAATRKHMSRFILRVLPVELTCYASEEEISRAIKPLIEQYFPAEAETPLKFAVLYDARA 943
SAA+TRKHMSRFILRVLPVE+ CYASEEEIS+A+ P++E+YFP + + P KFAVLY+ARA
Sbjct: 259 SAASTRKHMSRFILRVLPVEIACYASEEEISKAMAPIVEKYFPVDTQNPQKFAVLYEARA 318
Query: 944 NTGIERMAIIKAVAKVVPGPHKVDLNNPDKSIIVQIAKTVCSIGVVEKYKELSKYNLRQL 1123
NTGI+RM II +VAK VPGPHKVDLNNPDK+I+V+I KTVC IG+VE YK L+KYNLRQL
Sbjct: 319 NTGIDRMKIINSVAKSVPGPHKVDLNNPDKTIVVEIVKTVCLIGLVENYKGLAKYNLRQL 378
Query: 1124 TSPK 1135
TSPK
Sbjct: 379 TSPK 382