BLASTX nr result

ID: Coptis21_contig00008675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008675
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ86881.1| predicted protein [Hordeum vulgare subsp. vulgare]    250   2e-84
ref|XP_003574257.1| PREDICTED: SUMO-conjugating enzyme SCE1-like...   245   4e-83
emb|CAN61018.1| hypothetical protein VITISV_001138 [Vitis vinifera]   245   9e-83
ref|NP_001048802.1| Os03g0123100 [Oryza sativa Japonica Group] g...   244   2e-82
ref|NP_001150102.1| ubiquitin-conjugating enzyme E2 I [Zea mays]...   242   6e-82

>dbj|BAJ86881.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 161

 Score =  250 bits (638), Expect(2) = 2e-84
 Identities = 114/120 (95%), Positives = 115/120 (95%)
 Frame = -1

Query: 757 MSGGGIARGRLAEERKAWRKNHPHGFVAKPETAADGSVNLMIWQCTIPGKAGTDWEGGCY 578
           MSGGGIARGRLAEERKAWRKNHPHGFVAKPET ADGSVNLMIW CTIPGK GTDWE G Y
Sbjct: 1   MSGGGIARGRLAEERKAWRKNHPHGFVAKPETMADGSVNLMIWNCTIPGKQGTDWESGYY 60

Query: 577 PLTLHFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 398
           PLTLHFSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD
Sbjct: 61  PLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 120



 Score = 89.7 bits (221), Expect(2) = 2e-84
 Identities = 39/47 (82%), Positives = 45/47 (95%)
 Frame = -2

Query: 345 LVGIQDLLDQPNPADPAQTDGYHLFIQEPVEYRKRVKQQAKQYPSIV 205
           LVGIQDLLDQPNPADPAQTDGYHLFIQ+P EYR+R++ QAKQYP++V
Sbjct: 115 LVGIQDLLDQPNPADPAQTDGYHLFIQDPAEYRRRIRLQAKQYPALV 161


>ref|XP_003574257.1| PREDICTED: SUMO-conjugating enzyme SCE1-like isoform 1
           [Brachypodium distachyon]
          Length = 161

 Score =  245 bits (626), Expect(2) = 4e-83
 Identities = 111/120 (92%), Positives = 114/120 (95%)
 Frame = -1

Query: 757 MSGGGIARGRLAEERKAWRKNHPHGFVAKPETAADGSVNLMIWQCTIPGKAGTDWEGGCY 578
           MSGGGIARGRLAEERKAWRKNHPHGFVAKPET ADGSVNLM+W CTIPGK GTDWEGG +
Sbjct: 1   MSGGGIARGRLAEERKAWRKNHPHGFVAKPETVADGSVNLMVWHCTIPGKQGTDWEGGYF 60

Query: 577 PLTLHFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 398
           PLTL FSEDYPSKPPKC+FPQ FFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD
Sbjct: 61  PLTLQFSEDYPSKPPKCKFPQNFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 120



 Score = 89.7 bits (221), Expect(2) = 4e-83
 Identities = 39/47 (82%), Positives = 45/47 (95%)
 Frame = -2

Query: 345 LVGIQDLLDQPNPADPAQTDGYHLFIQEPVEYRKRVKQQAKQYPSIV 205
           LVGIQDLLDQPNPADPAQTDGYHLFIQ+P EY+KRV+ QAKQYP+++
Sbjct: 115 LVGIQDLLDQPNPADPAQTDGYHLFIQDPAEYKKRVRLQAKQYPALI 161


>emb|CAN61018.1| hypothetical protein VITISV_001138 [Vitis vinifera]
          Length = 160

 Score =  245 bits (625), Expect(2) = 9e-83
 Identities = 110/117 (94%), Positives = 113/117 (96%)
 Frame = -1

Query: 748 GGIARGRLAEERKAWRKNHPHGFVAKPETAADGSVNLMIWQCTIPGKAGTDWEGGCYPLT 569
           GGIARGRLAEERKAWRKNHPHGFVAKPET  DGSVNLM+W CTIPGKAGTDWEGG +PLT
Sbjct: 3   GGIARGRLAEERKAWRKNHPHGFVAKPETGPDGSVNLMVWHCTIPGKAGTDWEGGYFPLT 62

Query: 568 LHFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 398
           LHFSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD
Sbjct: 63  LHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 119



 Score = 89.0 bits (219), Expect(2) = 9e-83
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = -2

Query: 345 LVGIQDLLDQPNPADPAQTDGYHLFIQEPVEYRKRVKQQAKQYPSIV 205
           LVGIQDLLDQPNPADPAQTDGY LFIQEP EY++RV+QQAKQYP +V
Sbjct: 114 LVGIQDLLDQPNPADPAQTDGYQLFIQEPAEYKRRVRQQAKQYPPLV 160


>ref|NP_001048802.1| Os03g0123100 [Oryza sativa Japonica Group]
           gi|25446690|gb|AAN74837.1| Putative
           ubiquitin-conjugating enzyme [Oryza sativa Japonica
           Group] gi|108705922|gb|ABF93717.1| Ubiquitin-conjugating
           enzyme E2 I, putative, expressed [Oryza sativa Japonica
           Group] gi|113547273|dbj|BAF10716.1| Os03g0123100 [Oryza
           sativa Japonica Group] gi|125542190|gb|EAY88329.1|
           hypothetical protein OsI_09788 [Oryza sativa Indica
           Group] gi|125584745|gb|EAZ25409.1| hypothetical protein
           OsJ_09225 [Oryza sativa Japonica Group]
           gi|215692765|dbj|BAG88233.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215734816|dbj|BAG95538.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 160

 Score =  244 bits (622), Expect(2) = 2e-82
 Identities = 110/117 (94%), Positives = 113/117 (96%)
 Frame = -1

Query: 748 GGIARGRLAEERKAWRKNHPHGFVAKPETAADGSVNLMIWQCTIPGKAGTDWEGGCYPLT 569
           GGIARGRLAEERKAWRKNHPHGFVAKPET ADG+VNLMIW CTIPGK GTDWEGG +PLT
Sbjct: 3   GGIARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLT 62

Query: 568 LHFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 398
           LHFSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD
Sbjct: 63  LHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 119



 Score = 89.0 bits (219), Expect(2) = 2e-82
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = -2

Query: 345 LVGIQDLLDQPNPADPAQTDGYHLFIQEPVEYRKRVKQQAKQYPSIV 205
           LVGIQDLLDQPNPADPAQTDGYHLFIQ+P EY++RV+ QAKQYP IV
Sbjct: 114 LVGIQDLLDQPNPADPAQTDGYHLFIQDPTEYKRRVRLQAKQYPPIV 160


>ref|NP_001150102.1| ubiquitin-conjugating enzyme E2 I [Zea mays]
           gi|195605910|gb|ACG24785.1| ubiquitin-conjugating enzyme
           E2 I [Zea mays] gi|195636744|gb|ACG37840.1|
           ubiquitin-conjugating enzyme E2 I [Zea mays]
           gi|414864465|tpg|DAA43022.1| TPA: putative
           ubiquitin-conjugating enzyme family [Zea mays]
          Length = 160

 Score =  242 bits (618), Expect(2) = 6e-82
 Identities = 109/117 (93%), Positives = 113/117 (96%)
 Frame = -1

Query: 748 GGIARGRLAEERKAWRKNHPHGFVAKPETAADGSVNLMIWQCTIPGKAGTDWEGGCYPLT 569
           GGIARGRLAEERKAWRKNHPHGFVAKPE+  DG+VNLMIWQCTIPGK GTDWEGG +PLT
Sbjct: 3   GGIARGRLAEERKAWRKNHPHGFVAKPESLPDGTVNLMIWQCTIPGKQGTDWEGGYFPLT 62

Query: 568 LHFSEDYPSKPPKCRFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 398
           LHFSEDYPSKPPKC+FPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD
Sbjct: 63  LHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQD 119



 Score = 89.0 bits (219), Expect(2) = 6e-82
 Identities = 39/47 (82%), Positives = 45/47 (95%)
 Frame = -2

Query: 345 LVGIQDLLDQPNPADPAQTDGYHLFIQEPVEYRKRVKQQAKQYPSIV 205
           LVGIQDLLDQPNPADPAQTDGYHLFIQ+P EY++RV+ QAKQYP++V
Sbjct: 114 LVGIQDLLDQPNPADPAQTDGYHLFIQDPTEYKRRVRLQAKQYPALV 160


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