BLASTX nr result

ID: Coptis21_contig00008669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008669
         (1733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267477.1| PREDICTED: coiled-coil domain-containing pro...   241   5e-80
ref|XP_002522796.1| conserved hypothetical protein [Ricinus comm...   220   6e-66
ref|XP_003552991.1| PREDICTED: coiled-coil domain-containing pro...   200   2e-56
ref|XP_002298881.1| predicted protein [Populus trichocarpa] gi|2...   218   3e-54
ref|XP_004164638.1| PREDICTED: coiled-coil domain-containing pro...   207   9e-51

>ref|XP_002267477.1| PREDICTED: coiled-coil domain-containing protein 22 [Vitis vinifera]
            gi|296089961|emb|CBI39780.3| unnamed protein product
            [Vitis vinifera]
          Length = 545

 Score =  241 bits (615), Expect(2) = 5e-80
 Identities = 127/195 (65%), Positives = 153/195 (78%)
 Frame = +3

Query: 960  KPPLGEKERSTKELHHLLNPEMQSNLQTLNEVELETEAIILEIRKREEEHSKLFGELEKQ 1139
            + PL EK+RS +   +   P  Q  LQ L EVELE ++I+ EI+KREEEHSKL  +LEKQ
Sbjct: 339  RKPLEEKKRSLEGSVYATVPGAQEKLQKLKEVELEKQSILYEIKKREEEHSKLSADLEKQ 398

Query: 1140 PRAATRKSYIQRVTEITKNSRKQDAGIEQILKDTRDLRLESNSIQERLHRTYVVADETMS 1319
            P+  +R+SYIQR+TEITKNSRKQDA IE+ILKDTR+L+LESNS+QER HRTY V DET+ 
Sbjct: 399  PKLPSRRSYIQRITEITKNSRKQDADIERILKDTRELQLESNSVQERHHRTYAVVDETIF 458

Query: 1320 RDVKKDLVRQQVYRLLTTIHESFGQIFEKISITDRIRREVVEQEAKLAAVSTSSLNIEKL 1499
            R+ KKD V +Q Y LLT+IHESF QI EKI  TDR RREV E EAKLAA+++ SLNI KL
Sbjct: 459  REAKKDPVGRQAYMLLTSIHESFEQIAEKILATDRTRREVTEHEAKLAAMASRSLNINKL 518

Query: 1500 QADLDKIRKENKLLE 1544
            QADLD IR+EN+ LE
Sbjct: 519  QADLDAIRQENECLE 533



 Score = 85.1 bits (209), Expect(2) = 5e-80
 Identities = 49/113 (43%), Positives = 70/113 (61%)
 Frame = +1

Query: 508 EESEDTRTHAFGSKEAMSLTRDCYVTTLNEKLVFLQAQSSKMSKEIKDLRSQGEMLKQEL 687
           E+SED+R  A G++E MS  RD         L   Q QS K+   I+ LR+Q ++L +E+
Sbjct: 226 EKSEDSRRDASGNEE-MSTQRDD-----KNVLTSFQEQSLKIKSRIEMLRNQEKLLIEEV 279

Query: 688 AGSALESHHLEIEHGLLKATMEMAINDQHPADFYIRELNKQLKPGSLNVLEQE 846
               LES HLE E+ LLK+ MEM  +DQHP D YI +LN++++ G  N++E E
Sbjct: 280 NSKNLESQHLEEEYNLLKSAMEMEFDDQHPVDLYIEQLNERIEAGKRNLVELE 332


>ref|XP_002522796.1| conserved hypothetical protein [Ricinus communis]
            gi|223538034|gb|EEF39647.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 472

 Score =  220 bits (561), Expect(2) = 6e-66
 Identities = 120/195 (61%), Positives = 151/195 (77%)
 Frame = +3

Query: 960  KPPLGEKERSTKELHHLLNPEMQSNLQTLNEVELETEAIILEIRKREEEHSKLFGELEKQ 1139
            + PL EK+ S +E  +   PE +  LQ L EVELE E+I+ EIR RE+EHSKL  +L+KQ
Sbjct: 271  RKPLEEKKISLEESLYANIPEAREKLQKLREVELERESILSEIR-REDEHSKLSVDLKKQ 329

Query: 1140 PRAATRKSYIQRVTEITKNSRKQDAGIEQILKDTRDLRLESNSIQERLHRTYVVADETMS 1319
                +R SYI+R+ EITKNSRKQDA IE+ILK+TR+L+LESNSIQ+RLHRTY V DE + 
Sbjct: 330  SGLPSRTSYIERIKEITKNSRKQDADIERILKETRELQLESNSIQDRLHRTYTVLDELVF 389

Query: 1320 RDVKKDLVRQQVYRLLTTIHESFGQIFEKISITDRIRREVVEQEAKLAAVSTSSLNIEKL 1499
            R+ KK+ V +Q YRLLT+IHE F QI EKI +TDRI+RE+VE E KL A++T SLNI+KL
Sbjct: 390  REAKKEPVGRQAYRLLTSIHECFEQISEKILLTDRIQREMVEHEKKLTAMATRSLNIDKL 449

Query: 1500 QADLDKIRKENKLLE 1544
            QADLD IRKEN+ L+
Sbjct: 450  QADLDAIRKENENLQ 464



 Score = 58.9 bits (141), Expect(2) = 6e-66
 Identities = 32/85 (37%), Positives = 51/85 (60%)
 Frame = +1

Query: 586 TLNEKLVFLQAQSSKMSKEIKDLRSQGEMLKQELAGSALESHHLEIEHGLLKATMEMAIN 765
           T +  L F + + + ++ E + L++Q + L +E+     E  +LE E  LLKA  EMA +
Sbjct: 178 TGSRTLSFGKDKLTGIADESEILQNQKKFLIEEVTARISEIQNLEEEFQLLKAASEMAFD 237

Query: 766 DQHPADFYIRELNKQLKPGSLNVLE 840
           DQHP DFY+ +LN Q+    LN++E
Sbjct: 238 DQHPIDFYLEQLNDQVDSRKLNIME 262


>ref|XP_003552991.1| PREDICTED: coiled-coil domain-containing protein 22 homolog [Glycine
            max]
          Length = 337

 Score =  200 bits (509), Expect(2) = 2e-56
 Identities = 107/192 (55%), Positives = 138/192 (71%)
 Frame = +3

Query: 960  KPPLGEKERSTKELHHLLNPEMQSNLQTLNEVELETEAIILEIRKREEEHSKLFGELEKQ 1139
            + PL E++RS +E  +  NP+    LQ L E + E + I+ EI KREEEH KL  ++EK+
Sbjct: 146  RKPLEERKRSLEESLYSNNPDALEMLQKLREAQQEEQFILSEIMKREEEHLKLSADIEKK 205

Query: 1140 PRAATRKSYIQRVTEITKNSRKQDAGIEQILKDTRDLRLESNSIQERLHRTYVVADETMS 1319
             + A+RKSY  R+ EITKNSRKQDA IE+ILKDTR ++LESNSIQE LHRTY VADE + 
Sbjct: 206  QKVASRKSYTDRIKEITKNSRKQDADIERILKDTRVVQLESNSIQESLHRTYAVADEIVF 265

Query: 1320 RDVKKDLVRQQVYRLLTTIHESFGQIFEKISITDRIRREVVEQEAKLAAVSTSSLNIEKL 1499
            R+ KKD     VYRLL +IH+ F QI EKI  TDRIRREV E E KLAA ++ SL++ +L
Sbjct: 266  REAKKDPTGLHVYRLLVSIHKGFEQISEKILATDRIRREVAEYETKLAATASRSLDVSEL 325

Query: 1500 QADLDKIRKENK 1535
            +A+LD I +E +
Sbjct: 326  KANLDAIIREKE 337



 Score = 47.4 bits (111), Expect(2) = 2e-56
 Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
 Frame = +1

Query: 652 LRSQGEMLKQELAGSALESHHLEIEHGLLKATMEMAINDQHPADFYIRELNKQL--KPGS 825
           L+ + + L  E++    E  HLE E  L+  T EMA N+QH  DFYI +LN+Q+  K   
Sbjct: 75  LKQKEKKLVDEVSVRTSELAHLEQELELMNETAEMAFNNQHSIDFYIDQLNEQVQAKRNY 134

Query: 826 LNVLEQELD 852
           L  LE E D
Sbjct: 135 LLTLESEWD 143


>ref|XP_002298881.1| predicted protein [Populus trichocarpa] gi|222846139|gb|EEE83686.1|
            predicted protein [Populus trichocarpa]
          Length = 518

 Score =  218 bits (556), Expect = 3e-54
 Identities = 112/193 (58%), Positives = 149/193 (77%)
 Frame = +3

Query: 966  PLGEKERSTKELHHLLNPEMQSNLQTLNEVELETEAIILEIRKREEEHSKLFGELEKQPR 1145
            PL +K+R+ +E  +   P  Q  LQ L E+E E + ++ EI KREEEHSKL  +LEKQP+
Sbjct: 319  PLEDKKRNLEESLYANIPGSQEKLQKLRELEHEKQLVLSEITKREEEHSKLSADLEKQPK 378

Query: 1146 AATRKSYIQRVTEITKNSRKQDAGIEQILKDTRDLRLESNSIQERLHRTYVVADETMSRD 1325
              +R SYI+R+ EITK+S+KQDA I++ILK+TR+L+LESNSIQ+RLHRTY V DE + R+
Sbjct: 379  LPSRTSYIERIKEITKSSQKQDADIKRILKETRELQLESNSIQDRLHRTYAVLDEIVCRE 438

Query: 1326 VKKDLVRQQVYRLLTTIHESFGQIFEKISITDRIRREVVEQEAKLAAVSTSSLNIEKLQA 1505
             K+DLV ++ YRLLT++H+ FGQI EKI  TDRI RE+ E E KLAA+++ SLN++KLQA
Sbjct: 439  AKRDLVGRKAYRLLTSLHDCFGQISEKILTTDRISREMTELEKKLAAMASRSLNVDKLQA 498

Query: 1506 DLDKIRKENKLLE 1544
            DLD I KEN+ LE
Sbjct: 499  DLDAIVKENECLE 511


>ref|XP_004164638.1| PREDICTED: coiled-coil domain-containing protein 22-like [Cucumis
            sativus]
          Length = 511

 Score =  207 bits (526), Expect = 9e-51
 Identities = 110/189 (58%), Positives = 139/189 (73%)
 Frame = +3

Query: 978  KERSTKELHHLLNPEMQSNLQTLNEVELETEAIILEIRKREEEHSKLFGELEKQPRAATR 1157
            K RS +E     NP+ Q  LQ L E E E + I LEIR+REEE+S +  +L+KQP+  +R
Sbjct: 311  KRRSLQESLCASNPKAQEKLQKLREFESEKKLIELEIRRREEENSNIAIDLKKQPKQLSR 370

Query: 1158 KSYIQRVTEITKNSRKQDAGIEQILKDTRDLRLESNSIQERLHRTYVVADETMSRDVKKD 1337
            +SYI RV EITKNSRKQDA I++ILK+TR+L+LESN+IQERLHRTY V DE + R+ KKD
Sbjct: 371  RSYINRVKEITKNSRKQDADIDRILKETRELQLESNNIQERLHRTYAVVDELVLREAKKD 430

Query: 1338 LVRQQVYRLLTTIHESFGQIFEKISITDRIRREVVEQEAKLAAVSTSSLNIEKLQADLDK 1517
               +Q ++LLT IHE+FG+I  KI  TDR+RRE  E E K+AA ++ SLN  KLQADLD 
Sbjct: 431  DTGKQAHKLLTNIHENFGEISNKILSTDRLRRETAEYEKKIAASASRSLNFNKLQADLDA 490

Query: 1518 IRKENKLLE 1544
            IR+EN  LE
Sbjct: 491  IRRENGHLE 499


Top