BLASTX nr result

ID: Coptis21_contig00008664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008664
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600807.1| hypothetical protein MTR_3g069580 [Medicago ...    69   2e-09
ref|XP_003552627.1| PREDICTED: uncharacterized protein LOC100798...    68   3e-09
ref|XP_002966028.1| hypothetical protein SELMODRAFT_407242 [Sela...    68   3e-09
ref|XP_002971464.1| hypothetical protein SELMODRAFT_412184 [Sela...    68   3e-09
dbj|BAK02317.1| predicted protein [Hordeum vulgare subsp. vulgar...    66   1e-08

>ref|XP_003600807.1| hypothetical protein MTR_3g069580 [Medicago truncatula]
           gi|355489855|gb|AES71058.1| hypothetical protein
           MTR_3g069580 [Medicago truncatula]
           gi|388497752|gb|AFK36942.1| unknown [Medicago
           truncatula]
          Length = 170

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 38/128 (29%), Positives = 68/128 (53%)
 Frame = -3

Query: 579 NPNPFLVNDPKCIPGPNISEGLIVCSMVSVFTLLYSTLVIFTLKLIFKISSERGDMMVDI 400
           +P+  L  +P CIP   I+E L+   + S  + L+S+L+   LK   ++S      +  +
Sbjct: 39  DPSNTLNTNPSCIPTTAIAENLVAFHVYSFSSFLFSSLIALALKQTIRLS-RTSSHVAHV 97

Query: 399 TDRVMRVGLLISIVAQFFGFMFTLPTLVYWIQFQLGTWNCLDNYVIAPAVLLLISLPVSM 220
              V+RVG+L+S +    G  F +  LV  +Q +LGT  C   + +A  V L + +P+S+
Sbjct: 98  NGSVLRVGMLVSGIGSVLGCAFLMLALVNVVQIKLGTVACGSQHALAAIVPLFVFVPISL 157

Query: 219 LYFLSSVV 196
             +++ VV
Sbjct: 158 CVYVTVVV 165


>ref|XP_003552627.1| PREDICTED: uncharacterized protein LOC100798297 [Glycine max]
          Length = 180

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
 Frame = -3

Query: 606 ISMDWQAWTNPNPFLVNDPKCIPGPNISEGLIVCSMVSVFTLLYSTLVIFTLKLIFKISS 427
           I + W    +P+  L +DP C P   I+E LI   + S  + L+S+LV   LK   ++S 
Sbjct: 32  IGLTWNP-NDPSNSLNSDPACAPTAAIAENLIAFHVYSFSSFLFSSLVALALKQAIRLSR 90

Query: 426 ERG--------DMMVDITDRVMRVGLLISIVAQFFGFMFTLPTLVYWIQFQLGTWNCLDN 271
                       ++ D+    +R+G+L+S V    G  F +  LV   Q +LGT  C  +
Sbjct: 91  TTSFHYPAVVDHLVADVNRTALRLGMLVSGVGSVAGCAFLMLALVNVAQIKLGTLACGSS 150

Query: 270 YVIAPAVLLLISLPVSMLYFLSSVV 196
           +  A  V LLI +P+++L ++S V+
Sbjct: 151 HTYAAVVPLLIFVPLALLIYVSLVL 175


>ref|XP_002966028.1| hypothetical protein SELMODRAFT_407242 [Selaginella moellendorffii]
           gi|300166842|gb|EFJ33448.1| hypothetical protein
           SELMODRAFT_407242 [Selaginella moellendorffii]
          Length = 194

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
 Frame = -3

Query: 558 NDPK--CIPGPNISEGLIVCSMVSVFTLLYSTLVIFTLKL--IFKISSERGDMMVDITDR 391
           ND K  CIPGP+  + LIV  +V+     +S+LV   LKL  +FK S E       +  +
Sbjct: 65  NDAKHECIPGPSTFKRLIVYEVVAFSFFQFSSLVAHGLKLLMVFKNSKEASVDSATMNHK 124

Query: 390 VMRVGLLISIVAQFFGFMFTLPTLVYWIQFQLGTWNCLDNYVIAPAVLLLISLPVSMLYF 211
           ++R+G+L S V    G +F + +L+ ++Q + G+  C D++V+  AV L++ +   ++ F
Sbjct: 125 LLRLGILASAVGSGAGTVFLMLSLINYVQLRFGSLVCGDSWVLQAAVPLIVLVSTGVVIF 184

Query: 210 LSSV 199
           +S+V
Sbjct: 185 ISAV 188


>ref|XP_002971464.1| hypothetical protein SELMODRAFT_412184 [Selaginella moellendorffii]
           gi|300160596|gb|EFJ27213.1| hypothetical protein
           SELMODRAFT_412184 [Selaginella moellendorffii]
          Length = 213

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 41/124 (33%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
 Frame = -3

Query: 558 NDPK--CIPGPNISEGLIVCSMVSVFTLLYSTLVIFTLKL--IFKISSERGDMMVDITDR 391
           ND K  CIPGP+  + LIV  +V+     +S+LV   LKL  +FK S E       +  +
Sbjct: 84  NDAKHECIPGPSTFKRLIVYEVVAFSFFQFSSLVAHGLKLLMVFKNSKEASVDSATMNHK 143

Query: 390 VMRVGLLISIVAQFFGFMFTLPTLVYWIQFQLGTWNCLDNYVIAPAVLLLISLPVSMLYF 211
           ++R+G+L S V    G +F + +L+ ++Q + G+  C D++V+  AV L++ +   ++ F
Sbjct: 144 LLRLGILASAVGSGAGTVFLMLSLINYVQLRFGSLVCGDSWVLQAAVPLIVLVSTGVVIF 203

Query: 210 LSSV 199
           +S+V
Sbjct: 204 ISAV 207


>dbj|BAK02317.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326518282|dbj|BAJ88170.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 196

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
 Frame = -3

Query: 564 LVNDPKCIPGPNISEGLIVCSMVSVFTLLYSTLVIFTLKLIFKI--SSERGDMMVDITDR 391
           L  D  C  GP ++  L+V  +V+  + L+S+LV   LKL   +  S +  D    I  R
Sbjct: 66  LAGDSSCDAGPEVARSLLVLEVVAFSSFLFSSLVAQGLKLAINLINSKDPDDTHAHIDAR 125

Query: 390 VMRVGLLISIVAQFFGFMFTLPTLVYWIQFQLGTWNCLDNYVIAPAVLLLISL-PVSMLY 214
           ++R+G+L S V    G +F + ++V  +Q +LGT  C  N   A A   L+ L   +++ 
Sbjct: 126 LLRLGMLASAVGSVVGCVFLMASMVMVVQIRLGTLGCASNRAAAKAAAGLVGLVSTALVV 185

Query: 213 FLSSVVGT 190
           ++S+V  T
Sbjct: 186 YISTVFYT 193


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