BLASTX nr result

ID: Coptis21_contig00008651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00008651
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320117.1| predicted protein [Populus trichocarpa] gi|2...   110   6e-22
ref|XP_002511832.1| r2r3-myb transcription factor, putative [Ric...   108   2e-21
ref|XP_002301350.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-18
emb|CCA29116.1| putative MYB transcription factor [Rosa hybrid c...    91   4e-16
ref|XP_003618988.1| Myb-like transcription factor [Medicago trun...    89   1e-15

>ref|XP_002320117.1| predicted protein [Populus trichocarpa] gi|222860890|gb|EEE98432.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  110 bits (274), Expect = 6e-22
 Identities = 69/160 (43%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
 Frame = +3

Query: 3   STRHMAQWESARLEAEARLSKESLLFGSSQSNLLSVEKPDCDYFLRIWNSEVGKSFRSL- 179
           +TRHM QWESARLEAEARLS+ES LF           K DCDYFLRIWNSEVG+SFR + 
Sbjct: 143 ATRHMTQWESARLEAEARLSRESSLFLPPIPG-----KIDCDYFLRIWNSEVGESFRRIN 197

Query: 180 --AAQETXXXXXXXXXXXTKYGVCSGVSAEVKQFNAGASTEVSNQLEDMEYKSCKSERYK 353
              A+             TK G  S ++A++    AG+S   SNQ EDME KSC+S+   
Sbjct: 198 MGGAKTACPSPVSQASSSTKCGSISAITADISPNLAGSSAAASNQNEDMECKSCRSD--A 255

Query: 354 DGVVAGXXXXXXXXXXXXXXXXXXXXXXFPGGDEMSFFQG 473
           + V+AG                      FP  ++MSF +G
Sbjct: 256 EDVMAGPDSSSSAESEDSTDSTLQLLLDFPINNDMSFLEG 295


>ref|XP_002511832.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223549012|gb|EEF50501.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 308

 Score =  108 bits (270), Expect = 2e-21
 Identities = 71/162 (43%), Positives = 88/162 (54%), Gaps = 5/162 (3%)
 Frame = +3

Query: 3   STRHMAQWESARLEAEARLSKESLLFGSSQSNLLSVEKPDCDYFLRIWNSEVGKSFRSL- 179
           +TRHMAQWESARLEAEARLS+ES LF     N  + +K DCDYFLRIWNSEVG+SFR   
Sbjct: 143 ATRHMAQWESARLEAEARLSRESSLF-----NPPTPKKTDCDYFLRIWNSEVGESFRKFH 197

Query: 180 ---AAQETXXXXXXXXXXXTKYGVCSGV-SAEVKQFNAGASTEVSNQLEDMEYKSCKSER 347
               A              TKYG  S + + ++    AG+ST  S+Q+ED E KSCKS  
Sbjct: 198 RGDKASCQSPASASQASSSTKYGSVSALTTVDISPNIAGSSTPPSDQIEDTECKSCKS-- 255

Query: 348 YKDGVVAGXXXXXXXXXXXXXXXXXXXXXXFPGGDEMSFFQG 473
           Y + + AG                      FP  ++MSF +G
Sbjct: 256 YVEDMNAGSDSSSSIELEDSSDSTLQLLLDFPINNDMSFLEG 297


>ref|XP_002301350.1| predicted protein [Populus trichocarpa] gi|222843076|gb|EEE80623.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 62/126 (49%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
 Frame = +3

Query: 3   STRHMAQWESARLEAEARLSKESLLFGSSQSNLLSVEKPDCDYFLRIWNSEVGKSFRSLA 182
           +TRHMAQWESARLEAE RLS+ES LF         VEK DCD+FLRIWNSEVG+SFR + 
Sbjct: 143 ATRHMAQWESARLEAEKRLSRESSLFLPPM-----VEKIDCDHFLRIWNSEVGESFRRIN 197

Query: 183 A---QETXXXXXXXXXXXTKYGVCSGVSAEVKQFNAGASTEVSNQLEDMEYKSCKSERYK 353
               +             TK G  S +SA++    + +    SNQ EDME+KS KS  Y 
Sbjct: 198 MGDNKTACQSPVSQASSSTKCGSISAISADIIPNLSRSPATASNQNEDMEWKSPKS--YA 255

Query: 354 DGVVAG 371
           + V+AG
Sbjct: 256 EDVLAG 261


>emb|CCA29116.1| putative MYB transcription factor [Rosa hybrid cultivar]
          Length = 329

 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 57/122 (46%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
 Frame = +3

Query: 3   STRHMAQWESARLEAEARLSKESLLFGSSQSNLLSVEKPDCDYFLRIWNSEVGKSFRSL- 179
           +TRHMAQWESARLEAEARLS+ES  F +       ++K D DYFLR+W SEVG+SFR   
Sbjct: 144 ATRHMAQWESARLEAEARLSRESSNFSTP-----LLDKSDSDYFLRLWYSEVGESFRKFP 198

Query: 180 -AAQETXXXXXXXXXXXTKYGVCSGVSAEVKQFNAGASTEVSNQLEDMEYKSCKSERYKD 356
            A +              K G  S V+ E+     G+ST   NQ ED+EYK  KS   +D
Sbjct: 199 TAGKTPSDSPISEASSSGKCGSISAVTTEIGHCLMGSSTIAGNQDEDIEYKVFKSITGED 258

Query: 357 GV 362
            V
Sbjct: 259 MV 260


>ref|XP_003618988.1| Myb-like transcription factor [Medicago truncatula]
           gi|355494003|gb|AES75206.1| Myb-like transcription
           factor [Medicago truncatula]
          Length = 297

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 49/113 (43%), Positives = 66/113 (58%)
 Frame = +3

Query: 3   STRHMAQWESARLEAEARLSKESLLFGSSQSNLLSVEKPDCDYFLRIWNSEVGKSFRSLA 182
           +TRHMAQWESARLEAEARLSK++ LF +     L+  K D DYFL+IWNSEVG+SFR+  
Sbjct: 147 ATRHMAQWESARLEAEARLSKDTSLFNNGNIPSLASNKADSDYFLKIWNSEVGQSFRTGR 206

Query: 183 AQETXXXXXXXXXXXTKYGVCSGVSAEVKQFNAGASTEVSNQLEDMEYKSCKS 341
             +            +     S  +   K  +   +T  SN +ED E+++ KS
Sbjct: 207 KSDDEDDDDKTKCQSSMSQEGSSCNNNNKCGSVSVTTTTSNVMEDFEWRNYKS 259


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